RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 IQGAP2Q13576 1575 aa10.9□□□□□ -0.66
BRCC3-209ENST00000620502 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
BRCC3-209ENST00000620502 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
BRCC3-209ENST00000620502 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-209ENST00000620502 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
BRCC3-209ENST00000620502 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-209ENST00000620502 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
BRCC3-209ENST00000620502 GSE1Q14687 1217 aa10.86□□□□□ -0.67
BRCC3-209ENST00000620502 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
BRCC3-209ENST00000620502 UGGT2Q9NYU1 1516 aa10.85□□□□□ -0.67
BRCC3-209ENST00000620502 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
BRCC3-209ENST00000620502 KIF21BO75037 1637 aa10.83□□□□□ -0.68
BRCC3-209ENST00000620502 CARMIL2Q6F5E8 1435 aa10.83□□□□□ -0.68
BRCC3-209ENST00000620502 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
BRCC3-209ENST00000620502 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
BRCC3-209ENST00000620502 PTPRGP23470 1445 aa10.81□□□□□ -0.68
BRCC3-209ENST00000620502 KIAA0556O60303 1618 aa10.8□□□□□ -0.68
BRCC3-209ENST00000620502 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
BRCC3-209ENST00000620502 GABBR2O75899 941 aa10.79□□□□□ -0.68
BRCC3-209ENST00000620502 CLCN6P51797 869 aa10.79□□□□□ -0.68
BRCC3-209ENST00000620502 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
BRCC3-209ENST00000620502 GOLGA3Q08378 1498 aa10.77□□□□□ -0.69
BRCC3-209ENST00000620502 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
BRCC3-209ENST00000620502 PYGBP11216 843 aa10.76□□□□□ -0.69
BRCC3-209ENST00000620502 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
BRCC3-209ENST00000620502 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
BRCC3-209ENST00000620502 UHRF1BP1LA0JNW5 1464 aa10.74□□□□□ -0.69
BRCC3-209ENST00000620502 MAP3K13O43283 966 aa10.74□□□□□ -0.69
BRCC3-209ENST00000620502 PKD2Q13563 968 aa10.74□□□□□ -0.69
BRCC3-209ENST00000620502 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
BRCC3-209ENST00000620502 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-209ENST00000620502 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
BRCC3-209ENST00000620502 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
BRCC3-209ENST00000620502 MAPKBP1O60336 1514 aa10.72□□□□□ -0.69
BRCC3-209ENST00000620502 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
BRCC3-209ENST00000620502 ABCC2Q92887 1545 aa10.71□□□□□ -0.69
BRCC3-209ENST00000620502 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
BRCC3-209ENST00000620502 ABCA8O94911 1581 aa10.7□□□□□ -0.7
BRCC3-209ENST00000620502 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
BRCC3-209ENST00000620502 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
BRCC3-209ENST00000620502 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
BRCC3-209ENST00000620502 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
BRCC3-209ENST00000620502 KDM5BQ9UGL1 1544 aa10.68□□□□□ -0.7
BRCC3-209ENST00000620502 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
BRCC3-209ENST00000620502 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
BRCC3-209ENST00000620502 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
BRCC3-209ENST00000620502 ABCC10Q5T3U5 1492 aa10.67□□□□□ -0.7
BRCC3-209ENST00000620502 FHOD3Q2V2M9 1422 aa10.66□□□□□ -0.7
BRCC3-209ENST00000620502 DIP2BQ9P265 1576 aa10.65□□□□□ -0.7
BRCC3-209ENST00000620502 ASXL2Q76L83 1435 aa10.65□□□□□ -0.7
BRCC3-209ENST00000620502 ARHGAP35Q9NRY4 1499 aa10.64□□□□□ -0.71
BRCC3-209ENST00000620502 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
BRCC3-209ENST00000620502 RAPGEF6Q8TEU7 1601 aa10.63□□□□□ -0.71
BRCC3-209ENST00000620502 FAM69CQ0P6D2 419 aa10.63□□□□□ -0.71
BRCC3-209ENST00000620502 PCDHB8Q9UN66 801 aa10.63□□□□□ -0.71
BRCC3-209ENST00000620502 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-209ENST00000620502 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-209ENST00000620502 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
BRCC3-209ENST00000620502 ATP10BO94823 1461 aa10.61□□□□□ -0.71
BRCC3-209ENST00000620502 GLI2P10070 1586 aa10.6□□□□□ -0.71
BRCC3-209ENST00000620502 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-209ENST00000620502 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
BRCC3-209ENST00000620502 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
BRCC3-209ENST00000620502 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
BRCC3-209ENST00000620502 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
BRCC3-209ENST00000620502 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
BRCC3-209ENST00000620502 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
BRCC3-209ENST00000620502 TIE1P35590 1138 aa10.57□□□□□ -0.72
BRCC3-209ENST00000620502 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
BRCC3-209ENST00000620502 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
BRCC3-209ENST00000620502 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
BRCC3-209ENST00000620502 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
BRCC3-209ENST00000620502 LOC105371045A0A1W2PR82 267 aa10.56□□□□□ -0.72
BRCC3-209ENST00000620502 RIOK3O14730 519 aaKnown RBP10.56□□□□□ -0.72
BRCC3-209ENST00000620502 RGL2O15211 777 aa10.56□□□□□ -0.72
BRCC3-209ENST00000620502 PPRC1Q5VV67 1664 aaKnown RBP10.56□□□□□ -0.72
BRCC3-209ENST00000620502 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-209ENST00000620502 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-209ENST00000620502 CLIP1P30622 1438 aa10.55□□□□□ -0.72
BRCC3-209ENST00000620502 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-209ENST00000620502 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
BRCC3-209ENST00000620502 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
BRCC3-209ENST00000620502 HECW1Q76N89 1606 aa10.52□□□□□ -0.73
BRCC3-209ENST00000620502 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
BRCC3-209ENST00000620502 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
BRCC3-209ENST00000620502 CDK13Q14004 1512 aaKnown RBP10.52□□□□□ -0.73
BRCC3-209ENST00000620502 CFAP43Q8NDM7 1665 aa10.51□□□□□ -0.73
BRCC3-209ENST00000620502 PSEN1P49768 467 aa10.51□□□□□ -0.73
BRCC3-209ENST00000620502 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
BRCC3-209ENST00000620502 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
BRCC3-209ENST00000620502 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
BRCC3-209ENST00000620502 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-209ENST00000620502 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-209ENST00000620502 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
BRCC3-209ENST00000620502 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-209ENST00000620502 PCF11O94913 1555 aaKnown RBP10.5□□□□□ -0.73
BRCC3-209ENST00000620502 ABCA9Q8IUA7 1624 aa10.5□□□□□ -0.73
BRCC3-209ENST00000620502 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
BRCC3-209ENST00000620502 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
BRCC3-209ENST00000620502 MAGI3Q5TCQ9 1506 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms