RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
COL19A1-205ENST00000620364 CLSTN1O94985 981 aa15.87■□□□□ 0.13
COL19A1-205ENST00000620364 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
COL19A1-205ENST00000620364 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
COL19A1-205ENST00000620364 PKD2Q13563 968 aa15.86■□□□□ 0.13
COL19A1-205ENST00000620364 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
COL19A1-205ENST00000620364 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
COL19A1-205ENST00000620364 GOLGA6L6A8MZA4 724 aa15.82■□□□□ 0.12
COL19A1-205ENST00000620364 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
COL19A1-205ENST00000620364 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
COL19A1-205ENST00000620364 MCCP23508 829 aa15.8■□□□□ 0.12
COL19A1-205ENST00000620364 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
COL19A1-205ENST00000620364 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
COL19A1-205ENST00000620364 FOXD1Q16676 465 aa15.79■□□□□ 0.12
COL19A1-205ENST00000620364 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
COL19A1-205ENST00000620364 KIF3BO15066 747 aa15.79■□□□□ 0.12
COL19A1-205ENST00000620364 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
COL19A1-205ENST00000620364 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
COL19A1-205ENST00000620364 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
COL19A1-205ENST00000620364 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
COL19A1-205ENST00000620364 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.11
COL19A1-205ENST00000620364 NUP155O75694 1391 aa15.77■□□□□ 0.11
COL19A1-205ENST00000620364 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
COL19A1-205ENST00000620364 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
COL19A1-205ENST00000620364 GOLGA6L4A6NEF3 574 aa15.75■□□□□ 0.11
COL19A1-205ENST00000620364 FMN1Q68DA7 1419 aa15.75■□□□□ 0.11
COL19A1-205ENST00000620364 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
COL19A1-205ENST00000620364 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
COL19A1-205ENST00000620364 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
COL19A1-205ENST00000620364 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL19A1-205ENST00000620364 APBB1O00213 710 aa15.74■□□□□ 0.11
COL19A1-205ENST00000620364 NGDNQ8NEJ9 315 aaKnown RBP15.74■□□□□ 0.11
COL19A1-205ENST00000620364 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
COL19A1-205ENST00000620364 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
COL19A1-205ENST00000620364 U2AF1L5P0DN76 240 aaPredicted RBP15.74■□□□□ 0.11
COL19A1-205ENST00000620364 U2AF1Q01081 240 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL19A1-205ENST00000620364 G3V3G9 751 aa15.73■□□□□ 0.11
COL19A1-205ENST00000620364 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
COL19A1-205ENST00000620364 IPO8O15397 1037 aaKnown RBP15.73■□□□□ 0.11
COL19A1-205ENST00000620364 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
COL19A1-205ENST00000620364 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
COL19A1-205ENST00000620364 CHMP3Q9Y3E7 222 aa15.72■□□□□ 0.11
COL19A1-205ENST00000620364 TAF7LQ5H9L4 462 aa15.71■□□□□ 0.1
COL19A1-205ENST00000620364 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
COL19A1-205ENST00000620364 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
COL19A1-205ENST00000620364 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
COL19A1-205ENST00000620364 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
COL19A1-205ENST00000620364 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
COL19A1-205ENST00000620364 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
COL19A1-205ENST00000620364 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
COL19A1-205ENST00000620364 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
COL19A1-205ENST00000620364 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
COL19A1-205ENST00000620364 NRDCO43847 1150 aa15.67■□□□□ 0.1
COL19A1-205ENST00000620364 AMPHP49418 695 aa15.67■□□□□ 0.1
COL19A1-205ENST00000620364 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
COL19A1-205ENST00000620364 CHMP4AQ9BY43 222 aa15.67■□□□□ 0.1
COL19A1-205ENST00000620364 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
COL19A1-205ENST00000620364 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
COL19A1-205ENST00000620364 NUTM2FA1L443 756 aa15.65■□□□□ 0.1
COL19A1-205ENST00000620364 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
COL19A1-205ENST00000620364 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
COL19A1-205ENST00000620364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL19A1-205ENST00000620364 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
COL19A1-205ENST00000620364 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
COL19A1-205ENST00000620364 RALBP1Q15311 655 aa15.62■□□□□ 0.09
COL19A1-205ENST00000620364 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
COL19A1-205ENST00000620364 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
COL19A1-205ENST00000620364 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
COL19A1-205ENST00000620364 EVA1CP58658 441 aa15.62■□□□□ 0.09
COL19A1-205ENST00000620364 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
COL19A1-205ENST00000620364 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
COL19A1-205ENST00000620364 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
COL19A1-205ENST00000620364 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
COL19A1-205ENST00000620364 JPH4Q96JJ6 628 aa15.61■□□□□ 0.09
COL19A1-205ENST00000620364 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
COL19A1-205ENST00000620364 DRC7Q8IY82 874 aa15.59■□□□□ 0.09
COL19A1-205ENST00000620364 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
COL19A1-205ENST00000620364 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.09
COL19A1-205ENST00000620364 MSH5O43196 834 aa15.58■□□□□ 0.08
COL19A1-205ENST00000620364 RWDD1Q9H446 243 aaPredicted RBP15.57■□□□□ 0.08
COL19A1-205ENST00000620364 SLC4A10Q6U841 1118 aa15.57■□□□□ 0.08
COL19A1-205ENST00000620364 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
COL19A1-205ENST00000620364 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
COL19A1-205ENST00000620364 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
COL19A1-205ENST00000620364 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
COL19A1-205ENST00000620364 TRAK1Q9UPV9 953 aa15.57■□□□□ 0.08
COL19A1-205ENST00000620364 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
COL19A1-205ENST00000620364 SMC4Q9NTJ3 1288 aa15.56■□□□□ 0.08
COL19A1-205ENST00000620364 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
COL19A1-205ENST00000620364 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
COL19A1-205ENST00000620364 WIZO95785 1651 aa15.55■□□□□ 0.08
COL19A1-205ENST00000620364 KIAA2012Q0VF49 1180 aa15.55■□□□□ 0.08
COL19A1-205ENST00000620364 TRIM6-TRIM34B2RNG4 842 aa15.54■□□□□ 0.08
COL19A1-205ENST00000620364 CCDC146Q8IYE0 955 aa15.54■□□□□ 0.08
COL19A1-205ENST00000620364 C1orf141Q5JVX7 400 aa15.54■□□□□ 0.08
COL19A1-205ENST00000620364 HMMRO75330 724 aa15.54■□□□□ 0.08
COL19A1-205ENST00000620364 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
COL19A1-205ENST00000620364 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
COL19A1-205ENST00000620364 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.07
COL19A1-205ENST00000620364 PTPRGP23470 1445 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms