RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 SUPT6HQ7KZ85 1726 aaKnown RBP11.2□□□□□ -0.62
PSMB3-212ENST00000620309 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
PSMB3-212ENST00000620309 ATP10BO94823 1461 aa11.19□□□□□ -0.62
PSMB3-212ENST00000620309 NEO1Q92859 1461 aa11.19□□□□□ -0.62
PSMB3-212ENST00000620309 HSPA2P54652 639 aa11.19□□□□□ -0.62
PSMB3-212ENST00000620309 RICTORQ6R327 1708 aa11.18□□□□□ -0.62
PSMB3-212ENST00000620309 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
PSMB3-212ENST00000620309 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
PSMB3-212ENST00000620309 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
PSMB3-212ENST00000620309 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
PSMB3-212ENST00000620309 CDK11AQ9UQ88 783 aaPredicted RBP11.17□□□□□ -0.62
PSMB3-212ENST00000620309 CDC42BPAQ5VT25 1732 aa11.17□□□□□ -0.62
PSMB3-212ENST00000620309 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
PSMB3-212ENST00000620309 TTC37Q6PGP7 1564 aa11.16□□□□□ -0.62
PSMB3-212ENST00000620309 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
PSMB3-212ENST00000620309 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
PSMB3-212ENST00000620309 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
PSMB3-212ENST00000620309 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
PSMB3-212ENST00000620309 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
PSMB3-212ENST00000620309 TROQ12816 1431 aaPredicted RBP11.13□□□□□ -0.63
PSMB3-212ENST00000620309 ZMYM4Q5VZL5 1548 aa11.13□□□□□ -0.63
PSMB3-212ENST00000620309 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
PSMB3-212ENST00000620309 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
PSMB3-212ENST00000620309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.638e-7■■■■■ 66.5
PSMB3-212ENST00000620309 FANCAO15360 1455 aa11.1□□□□□ -0.63
PSMB3-212ENST00000620309 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
PSMB3-212ENST00000620309 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
PSMB3-212ENST00000620309 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
PSMB3-212ENST00000620309 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
PSMB3-212ENST00000620309 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
PSMB3-212ENST00000620309 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
PSMB3-212ENST00000620309 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
PSMB3-212ENST00000620309 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
PSMB3-212ENST00000620309 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
PSMB3-212ENST00000620309 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
PSMB3-212ENST00000620309 ARHGAP5Q13017 1502 aa11.05□□□□□ -0.64
PSMB3-212ENST00000620309 ZFYVE16Q7Z3T8 1539 aa11.05□□□□□ -0.64
PSMB3-212ENST00000620309 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
PSMB3-212ENST00000620309 AKNAQ7Z591 1439 aa11.05□□□□□ -0.64
PSMB3-212ENST00000620309 MAGI2Q86UL8 1455 aa11.05□□□□□ -0.64
PSMB3-212ENST00000620309 APLP2Q06481 763 aa11.04□□□□□ -0.64
PSMB3-212ENST00000620309 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
PSMB3-212ENST00000620309 PTPRTO14522 1441 aa11.03□□□□□ -0.64
PSMB3-212ENST00000620309 PTPN23Q9H3S7 1636 aa11.03□□□□□ -0.64
PSMB3-212ENST00000620309 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
PSMB3-212ENST00000620309 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.64
PSMB3-212ENST00000620309 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
PSMB3-212ENST00000620309 ABCC1P33527 1531 aa11□□□□□ -0.65
PSMB3-212ENST00000620309 GPATCH8Q9UKJ3 1502 aaKnown RBP11□□□□□ -0.65
PSMB3-212ENST00000620309 PLCH2O75038 1416 aa11□□□□□ -0.65
PSMB3-212ENST00000620309 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
PSMB3-212ENST00000620309 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
PSMB3-212ENST00000620309 RRBP1Q9P2E9 1410 aaKnown RBP10.99□□□□□ -0.65
PSMB3-212ENST00000620309 DNMT1P26358 1616 aaKnown RBP10.98□□□□□ -0.65
PSMB3-212ENST00000620309 CAMSAP2Q08AD1 1489 aa10.98□□□□□ -0.65
PSMB3-212ENST00000620309 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
PSMB3-212ENST00000620309 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
PSMB3-212ENST00000620309 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
PSMB3-212ENST00000620309 C3P01024 1663 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 ATP10AO60312 1499 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
PSMB3-212ENST00000620309 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
PSMB3-212ENST00000620309 C9orf84Q5VXU9 1444 aa10.95□□□□□ -0.66
PSMB3-212ENST00000620309 CEBPAP49715 358 aaPredicted RBP10.94□□□□□ -0.66
PSMB3-212ENST00000620309 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
PSMB3-212ENST00000620309 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
PSMB3-212ENST00000620309 GCC2Q8IWJ2 1684 aa10.93□□□□□ -0.66
PSMB3-212ENST00000620309 REREQ9P2R6 1566 aa10.93□□□□□ -0.66
PSMB3-212ENST00000620309 KDM5CP41229 1560 aa10.92□□□□□ -0.66
PSMB3-212ENST00000620309 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
PSMB3-212ENST00000620309 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
PSMB3-212ENST00000620309 MLECQ14165 292 aa10.92□□□□□ -0.66
PSMB3-212ENST00000620309 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
PSMB3-212ENST00000620309 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
PSMB3-212ENST00000620309 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
PSMB3-212ENST00000620309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.667e-7■■■■■ 52.8
PSMB3-212ENST00000620309 PLXNC1O60486 1568 aa10.9□□□□□ -0.66
PSMB3-212ENST00000620309 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
PSMB3-212ENST00000620309 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
PSMB3-212ENST00000620309 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
PSMB3-212ENST00000620309 CCDC141Q6ZP82 1450 aa10.88□□□□□ -0.67
PSMB3-212ENST00000620309 MBD5Q9P267 1494 aa10.88□□□□□ -0.67
PSMB3-212ENST00000620309 KIAA1107Q9UPP5 1409 aa10.87□□□□□ -0.67
PSMB3-212ENST00000620309 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
PSMB3-212ENST00000620309 AGLP35573 1532 aa10.87□□□□□ -0.67
PSMB3-212ENST00000620309 KIDINS220Q9ULH0 1771 aa10.87□□□□□ -0.67
PSMB3-212ENST00000620309 DAPK1P53355 1430 aa10.86□□□□□ -0.67
PSMB3-212ENST00000620309 TRAPPC8Q9Y2L5 1435 aa10.86□□□□□ -0.67
PSMB3-212ENST00000620309 CAMSAP1Q5T5Y3 1602 aa10.86□□□□□ -0.67
PSMB3-212ENST00000620309 ABCA6Q8N139 1617 aa10.86□□□□□ -0.67
PSMB3-212ENST00000620309 ATP7AQ04656 1500 aa10.85□□□□□ -0.67
PSMB3-212ENST00000620309 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
PSMB3-212ENST00000620309 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
PSMB3-212ENST00000620309 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
PSMB3-212ENST00000620309 MROH2AA6NES4 1674 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms