RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 ZMYM4Q5VZL5 1548 aa21.31■■□□□ 1
PDCD6-213ENST00000618970 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
PDCD6-213ENST00000618970 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
PDCD6-213ENST00000618970 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
PDCD6-213ENST00000618970 ZFYVE16Q7Z3T8 1539 aa21.26■□□□□ 0.99
PDCD6-213ENST00000618970 RIMS1Q86UR5 1692 aaKnown RBP21.26■□□□□ 0.99
PDCD6-213ENST00000618970 PLCH2O75038 1416 aa21.26■□□□□ 0.99
PDCD6-213ENST00000618970 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
PDCD6-213ENST00000618970 KIF14Q15058 1648 aa21.26■□□□□ 0.99
PDCD6-213ENST00000618970 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
PDCD6-213ENST00000618970 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
PDCD6-213ENST00000618970 POGZQ7Z3K3 1410 aa21.23■□□□□ 0.99
PDCD6-213ENST00000618970 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
PDCD6-213ENST00000618970 MAGI2Q86UL8 1455 aa21.2■□□□□ 0.98
PDCD6-213ENST00000618970 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
PDCD6-213ENST00000618970 LMTK3Q96Q04 1460 aa21.18■□□□□ 0.98
PDCD6-213ENST00000618970 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
PDCD6-213ENST00000618970 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
PDCD6-213ENST00000618970 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
PDCD6-213ENST00000618970 FER1L4A9Z1Z3 1794 aa21.14■□□□□ 0.97
PDCD6-213ENST00000618970 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
PDCD6-213ENST00000618970 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
PDCD6-213ENST00000618970 CDC42BPBQ9Y5S2 1711 aa21.11■□□□□ 0.97
PDCD6-213ENST00000618970 ATP10AO60312 1499 aa21.1■□□□□ 0.97
PDCD6-213ENST00000618970 KDM5CP41229 1560 aa21.1■□□□□ 0.97
PDCD6-213ENST00000618970 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
PDCD6-213ENST00000618970 MLECQ14165 292 aa21.09■□□□□ 0.97
PDCD6-213ENST00000618970 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
PDCD6-213ENST00000618970 C9orf84Q5VXU9 1444 aa21.09■□□□□ 0.97
PDCD6-213ENST00000618970 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
PDCD6-213ENST00000618970 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.96
PDCD6-213ENST00000618970 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
PDCD6-213ENST00000618970 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
PDCD6-213ENST00000618970 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
PDCD6-213ENST00000618970 AFAP1Q8N556 730 aa21.04■□□□□ 0.96
PDCD6-213ENST00000618970 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
PDCD6-213ENST00000618970 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
PDCD6-213ENST00000618970 HSPA2P54652 639 aa21.03■□□□□ 0.96
PDCD6-213ENST00000618970 ABCC1P33527 1531 aa21.03■□□□□ 0.96
PDCD6-213ENST00000618970 CDC42BPAQ5VT25 1732 aa21.02■□□□□ 0.96
PDCD6-213ENST00000618970 ABCA6Q8N139 1617 aa21.02■□□□□ 0.96
PDCD6-213ENST00000618970 ITSN2Q9NZM3 1697 aa21.02■□□□□ 0.95
PDCD6-213ENST00000618970 SUPT6HQ7KZ85 1726 aaKnown RBP20.99■□□□□ 0.95
PDCD6-213ENST00000618970 APLP2Q06481 763 aa20.99■□□□□ 0.95
PDCD6-213ENST00000618970 REREQ9P2R6 1566 aa20.98■□□□□ 0.95
PDCD6-213ENST00000618970 TRAPPC8Q9Y2L5 1435 aa20.98■□□□□ 0.95
PDCD6-213ENST00000618970 MLH3Q9UHC1 1453 aa20.97■□□□□ 0.95
PDCD6-213ENST00000618970 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
PDCD6-213ENST00000618970 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
PDCD6-213ENST00000618970 PREX1Q8TCU6 1659 aa20.96■□□□□ 0.95
PDCD6-213ENST00000618970 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
PDCD6-213ENST00000618970 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
PDCD6-213ENST00000618970 KIDINS220Q9ULH0 1771 aa20.94■□□□□ 0.94
PDCD6-213ENST00000618970 CEBPAP49715 358 aaPredicted RBP20.93■□□□□ 0.94
PDCD6-213ENST00000618970 SAMD9LQ8IVG5 1584 aa20.93■□□□□ 0.94
PDCD6-213ENST00000618970 AGLP35573 1532 aa20.89■□□□□ 0.94
PDCD6-213ENST00000618970 C3P01024 1663 aa20.89■□□□□ 0.93
PDCD6-213ENST00000618970 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
PDCD6-213ENST00000618970 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
PDCD6-213ENST00000618970 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
PDCD6-213ENST00000618970 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
PDCD6-213ENST00000618970 STRCQ7RTU9 1775 aa20.84■□□□□ 0.93
PDCD6-213ENST00000618970 UHRF1BP1Q6BDS2 1440 aa20.82■□□□□ 0.92
PDCD6-213ENST00000618970 SETD1BQ9UPS6 1966 aaKnown RBP20.81■□□□□ 0.92
PDCD6-213ENST00000618970 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
PDCD6-213ENST00000618970 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
PDCD6-213ENST00000618970 ATP7AQ04656 1500 aa20.79■□□□□ 0.92
PDCD6-213ENST00000618970 HNRNPMP52272 730 aaKnown RBP eCLIP20.79■□□□□ 0.922e-7■■■■■ 37.9
PDCD6-213ENST00000618970 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
PDCD6-213ENST00000618970 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
PDCD6-213ENST00000618970 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
PDCD6-213ENST00000618970 ZNF644Q9H582 1327 aaPredicted RBP20.77■□□□□ 0.91
PDCD6-213ENST00000618970 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
PDCD6-213ENST00000618970 PLEKHH2Q8IVE3 1493 aa20.76■□□□□ 0.91
PDCD6-213ENST00000618970 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
PDCD6-213ENST00000618970 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
PDCD6-213ENST00000618970 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
PDCD6-213ENST00000618970 ESF1Q9H501 851 aaKnown RBP20.75■□□□□ 0.91
PDCD6-213ENST00000618970 CNTLNQ9NXG0 1405 aa20.75■□□□□ 0.91
PDCD6-213ENST00000618970 FGD6Q6ZV73 1430 aa20.72■□□□□ 0.91
PDCD6-213ENST00000618970 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
PDCD6-213ENST00000618970 A2MP01023 1474 aa20.71■□□□□ 0.91
PDCD6-213ENST00000618970 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
PDCD6-213ENST00000618970 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
PDCD6-213ENST00000618970 CLTCQ00610 1675 aaKnown RBP20.7■□□□□ 0.91
PDCD6-213ENST00000618970 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
PDCD6-213ENST00000618970 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
PDCD6-213ENST00000618970 DMRT2Q9Y5R5 561 aa20.67■□□□□ 0.9
PDCD6-213ENST00000618970 NPATQ14207 1427 aa20.67■□□□□ 0.9
PDCD6-213ENST00000618970 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
PDCD6-213ENST00000618970 PTPRTO14522 1441 aa20.65■□□□□ 0.9
PDCD6-213ENST00000618970 NCOA1Q15788 1441 aa20.65■□□□□ 0.9
PDCD6-213ENST00000618970 ARHGEF5Q12774 1597 aa20.64■□□□□ 0.9
PDCD6-213ENST00000618970 CAMSAP1Q5T5Y3 1602 aa20.63■□□□□ 0.89
PDCD6-213ENST00000618970 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
PDCD6-213ENST00000618970 RRBP1Q9P2E9 1410 aaKnown RBP20.62■□□□□ 0.89
PDCD6-213ENST00000618970 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
PDCD6-213ENST00000618970 GGT6Q6P531 493 aa20.6■□□□□ 0.89
PDCD6-213ENST00000618970 PTPRKQ15262 1439 aa20.6■□□□□ 0.89
PDCD6-213ENST00000618970 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms