RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 PZPP20742 1482 aa11.19□□□□□ -0.62
CHD7-212ENST00000618450 KIAA0556O60303 1618 aa11.19□□□□□ -0.62
CHD7-212ENST00000618450 KDM5CP41229 1560 aa11.18□□□□□ -0.62
CHD7-212ENST00000618450 ANP32CO43423 234 aa11.18□□□□□ -0.62
CHD7-212ENST00000618450 ABCC5O15440 1437 aa11.18□□□□□ -0.62
CHD7-212ENST00000618450 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
CHD7-212ENST00000618450 DAPK1P53355 1430 aa11.17□□□□□ -0.62
CHD7-212ENST00000618450 DHX29Q7Z478 1369 aaKnown RBP11.17□□□□□ -0.62
CHD7-212ENST00000618450 NUP153P49790 1475 aaKnown RBP11.17□□□□□ -0.62
CHD7-212ENST00000618450 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
CHD7-212ENST00000618450 BCANQ96GW7 911 aa11.16□□□□□ -0.62
CHD7-212ENST00000618450 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
CHD7-212ENST00000618450 ADGRL2O95490 1459 aa11.15□□□□□ -0.62
CHD7-212ENST00000618450 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
CHD7-212ENST00000618450 KIF14Q15058 1648 aa11.15□□□□□ -0.62
CHD7-212ENST00000618450 RAPGEF6Q8TEU7 1601 aa11.14□□□□□ -0.63
CHD7-212ENST00000618450 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
CHD7-212ENST00000618450 CDC42BPAQ5VT25 1732 aa11.14□□□□□ -0.63
CHD7-212ENST00000618450 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
CHD7-212ENST00000618450 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
CHD7-212ENST00000618450 DNAJC5BQ9UF47 199 aa11.12□□□□□ -0.63
CHD7-212ENST00000618450 MPHOSPH9Q99550 1183 aa11.11□□□□□ -0.63
CHD7-212ENST00000618450 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
CHD7-212ENST00000618450 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
CHD7-212ENST00000618450 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
CHD7-212ENST00000618450 UHRF1BP1Q6BDS2 1440 aa11.1□□□□□ -0.63
CHD7-212ENST00000618450 ITSN2Q9NZM3 1697 aa11.1□□□□□ -0.63
CHD7-212ENST00000618450 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
CHD7-212ENST00000618450 KIF7Q2M1P5 1343 aa11.08□□□□□ -0.64
CHD7-212ENST00000618450 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
CHD7-212ENST00000618450 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
CHD7-212ENST00000618450 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
CHD7-212ENST00000618450 SMG6Q86US8 1419 aaKnown RBP11.06□□□□□ -0.64
CHD7-212ENST00000618450 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
CHD7-212ENST00000618450 GPATCH8Q9UKJ3 1502 aaKnown RBP11.05□□□□□ -0.64
CHD7-212ENST00000618450 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
CHD7-212ENST00000618450 PTPRGP23470 1445 aa11.05□□□□□ -0.64
CHD7-212ENST00000618450 EIF4G3O43432 1585 aaKnown RBP11.04□□□□□ -0.64
CHD7-212ENST00000618450 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHD7-212ENST00000618450 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
CHD7-212ENST00000618450 ARHGEF12Q9NZN5 1544 aa11.04□□□□□ -0.64
CHD7-212ENST00000618450 ABCC10Q5T3U5 1492 aa11.03□□□□□ -0.64
CHD7-212ENST00000618450 ABCA8O94911 1581 aa11.03□□□□□ -0.64
CHD7-212ENST00000618450 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHD7-212ENST00000618450 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
CHD7-212ENST00000618450 RALGAPBQ86X10 1494 aa11.03□□□□□ -0.64
CHD7-212ENST00000618450 LRPPRCP42704 1394 aaKnown RBP11.03□□□□□ -0.64
CHD7-212ENST00000618450 FOXD1Q16676 465 aa11.02□□□□□ -0.64
CHD7-212ENST00000618450 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.64
CHD7-212ENST00000618450 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
CHD7-212ENST00000618450 SHANK2Q9UPX8 1470 aa11.02□□□□□ -0.65
CHD7-212ENST00000618450 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
CHD7-212ENST00000618450 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
CHD7-212ENST00000618450 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
CHD7-212ENST00000618450 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
CHD7-212ENST00000618450 LAMC1P11047 1609 aa11.01□□□□□ -0.65
CHD7-212ENST00000618450 TROQ12816 1431 aaPredicted RBP11□□□□□ -0.65
CHD7-212ENST00000618450 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
CHD7-212ENST00000618450 IFT140Q96RY7 1462 aa11□□□□□ -0.65
CHD7-212ENST00000618450 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
CHD7-212ENST00000618450 NEFLP07196 543 aa10.98□□□□□ -0.65
CHD7-212ENST00000618450 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
CHD7-212ENST00000618450 ARID4BQ4LE39 1312 aaPredicted RBP10.98□□□□□ -0.65
CHD7-212ENST00000618450 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
CHD7-212ENST00000618450 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
CHD7-212ENST00000618450 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
CHD7-212ENST00000618450 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
CHD7-212ENST00000618450 NUP160Q12769 1436 aa10.95□□□□□ -0.66
CHD7-212ENST00000618450 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
CHD7-212ENST00000618450 UNC13BO14795 1591 aa10.94□□□□□ -0.66
CHD7-212ENST00000618450 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
CHD7-212ENST00000618450 RNF17Q9BXT8 1623 aaKnown RBP10.93□□□□□ -0.66
CHD7-212ENST00000618450 USP47Q96K76 1375 aa10.93□□□□□ -0.66
CHD7-212ENST00000618450 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
CHD7-212ENST00000618450 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
CHD7-212ENST00000618450 PREX2Q70Z35 1606 aa10.92□□□□□ -0.66
CHD7-212ENST00000618450 SAMD9LQ8IVG5 1584 aa10.92□□□□□ -0.66
CHD7-212ENST00000618450 PRDM15P57071 1507 aaPredicted RBP10.91□□□□□ -0.66
CHD7-212ENST00000618450 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
CHD7-212ENST00000618450 SYNJ2O15056 1496 aa10.9□□□□□ -0.66
CHD7-212ENST00000618450 B4GALNT3Q6L9W6 998 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 MRS2Q9HD23 443 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CHD7-212ENST00000618450 INSRP06213 1382 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 ATP10BO94823 1461 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
CHD7-212ENST00000618450 IQGAP3Q86VI3 1631 aa10.88□□□□□ -0.67
CHD7-212ENST00000618450 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
CHD7-212ENST00000618450 ANKRD50Q9ULJ7 1429 aa10.88□□□□□ -0.67
CHD7-212ENST00000618450 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
CHD7-212ENST00000618450 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
CHD7-212ENST00000618450 FAM135AQ9P2D6 1515 aa10.87□□□□□ -0.67
CHD7-212ENST00000618450 ATP10AO60312 1499 aa10.86□□□□□ -0.67
CHD7-212ENST00000618450 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
CHD7-212ENST00000618450 FAM9BQ8IZU0 186 aa10.86□□□□□ -0.67
CHD7-212ENST00000618450 PLXNC1O60486 1568 aa10.86□□□□□ -0.67
CHD7-212ENST00000618450 PER1O15534 1290 aaPredicted RBP10.86□□□□□ -0.67
CHD7-212ENST00000618450 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
CHD7-212ENST00000618450 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms