RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 LMTK3Q96Q04 1460 aa40.61■■■■■ 4.09
GADD45A-205ENST00000617962 SIGLEC1Q9BZZ2 1709 aa40.61■■■■■ 4.09
GADD45A-205ENST00000617962 CHIC1Q5VXU3 224 aa40.56■■■■■ 4.08
GADD45A-205ENST00000617962 PLPPR3Q6T4P5 718 aa40.54■■■■■ 4.08
GADD45A-205ENST00000617962 CDK11AQ9UQ88 783 aaPredicted RBP40.54■■■■■ 4.08
GADD45A-205ENST00000617962 MYO5CQ9NQX4 1742 aa40.53■■■■■ 4.08
GADD45A-205ENST00000617962 EFCAB2Q5VUJ9 269 aa40.51■■■■■ 4.08
GADD45A-205ENST00000617962 KIF14Q15058 1648 aa40.5■■■■■ 4.07
GADD45A-205ENST00000617962 MLECQ14165 292 aa40.5■■■■■ 4.07
GADD45A-205ENST00000617962 FBXO41Q8TF61 875 aa40.49■■■■■ 4.07
GADD45A-205ENST00000617962 TROQ12816 1431 aaPredicted RBP40.44■■■■■ 4.06
GADD45A-205ENST00000617962 ATP10AO60312 1499 aa40.42■■■■■ 4.06
GADD45A-205ENST00000617962 FER1L4A9Z1Z3 1794 aa40.42■■■■■ 4.06
GADD45A-205ENST00000617962 HSPA2P54652 639 aa40.41■■■■■ 4.06
GADD45A-205ENST00000617962 LRRIQ1Q96JM4 1722 aa40.39■■■■■ 4.06
GADD45A-205ENST00000617962 CLIP1P30622 1438 aa40.39■■■■■ 4.06
GADD45A-205ENST00000617962 ARHGAP5Q13017 1502 aa40.38■■■■■ 4.06
GADD45A-205ENST00000617962 C9orf84Q5VXU9 1444 aa40.38■■■■■ 4.05
GADD45A-205ENST00000617962 ZNF518AQ6AHZ1 1483 aa40.34■■■■■ 4.05
GADD45A-205ENST00000617962 ARHGEF12Q9NZN5 1544 aa40.32■■■■■ 4.05
GADD45A-205ENST00000617962 AFAP1Q8N556 730 aa40.3■■■■■ 4.04
GADD45A-205ENST00000617962 KDM5CP41229 1560 aa40.27■■■■■ 4.04
GADD45A-205ENST00000617962 CDC42BPBQ9Y5S2 1711 aa40.23■■■■■ 4.03
GADD45A-205ENST00000617962 MYT1LQ9UL68 1186 aa40.23■■■■■ 4.03
GADD45A-205ENST00000617962 CASKIN1Q8WXD9 1431 aa40.21■■■■■ 4.03
GADD45A-205ENST00000617962 CCDC18Q5T9S5 1454 aa40.19■■■■■ 4.02
GADD45A-205ENST00000617962 CEBPAP49715 358 aaPredicted RBP40.17■■■■■ 4.02
GADD45A-205ENST00000617962 DIP2CQ9Y2E4 1556 aa40.17■■■■■ 4.02
GADD45A-205ENST00000617962 PREX2Q70Z35 1606 aa40.16■■■■■ 4.02
GADD45A-205ENST00000617962 PREX1Q8TCU6 1659 aa40.12■■■■■ 4.01
GADD45A-205ENST00000617962 ABCA6Q8N139 1617 aa40.11■■■■■ 4.01
GADD45A-205ENST00000617962 MLH3Q9UHC1 1453 aa40.11■■■■■ 4.01
GADD45A-205ENST00000617962 ABCC1P33527 1531 aa40.11■■■■■ 4.01
GADD45A-205ENST00000617962 TRAPPC8Q9Y2L5 1435 aa40.1■■■■■ 4.01
GADD45A-205ENST00000617962 REREQ9P2R6 1566 aa40.1■■■■■ 4.01
GADD45A-205ENST00000617962 ITSN2Q9NZM3 1697 aa40.06■■■■■ 4
GADD45A-205ENST00000617962 FYCO1Q9BQS8 1478 aa40.03■■■■■ 4
GADD45A-205ENST00000617962 CDC42BPAQ5VT25 1732 aa40.02■■■■■ 4
GADD45A-205ENST00000617962 CERKQ8TCT0 537 aa39.99■■■■□ 3.99
GADD45A-205ENST00000617962 AGLP35573 1532 aa39.97■■■■□ 3.99
GADD45A-205ENST00000617962 UHRF1BP1Q6BDS2 1440 aa39.97■■■■□ 3.99
GADD45A-205ENST00000617962 KIDINS220Q9ULH0 1771 aa39.95■■■■□ 3.99
GADD45A-205ENST00000617962 C3P01024 1663 aa39.92■■■■□ 3.98
GADD45A-205ENST00000617962 ZNF777Q9ULD5 760 aaPredicted RBP39.92■■■■□ 3.98
GADD45A-205ENST00000617962 ESF1Q9H501 851 aaKnown RBP39.91■■■■□ 3.98
GADD45A-205ENST00000617962 SETD1BQ9UPS6 1966 aaKnown RBP39.91■■■■□ 3.98
GADD45A-205ENST00000617962 STRCQ7RTU9 1775 aa39.89■■■■□ 3.98
GADD45A-205ENST00000617962 SAMD9LQ8IVG5 1584 aa39.88■■■■□ 3.97
GADD45A-205ENST00000617962 GPATCH8Q9UKJ3 1502 aaKnown RBP39.86■■■■□ 3.97
GADD45A-205ENST00000617962 DMRT2Q9Y5R5 561 aa39.85■■■■□ 3.97
GADD45A-205ENST00000617962 SYCP2Q9BX26 1530 aa39.84■■■■□ 3.97
GADD45A-205ENST00000617962 HNRNPMP52272 730 aaKnown RBP eCLIP39.79■■■■□ 3.96
GADD45A-205ENST00000617962 SPAG9O60271 1321 aaKnown RBP39.78■■■■□ 3.96
GADD45A-205ENST00000617962 CNTLNQ9NXG0 1405 aa39.78■■■■□ 3.96
GADD45A-205ENST00000617962 CFDP1Q9UEE9 299 aaPredicted RBP39.73■■■■□ 3.95
GADD45A-205ENST00000617962 CCNB3Q8WWL7 1395 aa39.72■■■■□ 3.95
GADD45A-205ENST00000617962 KIAA1107Q9UPP5 1409 aa39.7■■■■□ 3.95
GADD45A-205ENST00000617962 PLEKHH2Q8IVE3 1493 aa39.69■■■■□ 3.94
GADD45A-205ENST00000617962 SUPT6HQ7KZ85 1726 aaKnown RBP39.69■■■■□ 3.94
GADD45A-205ENST00000617962 ATP7AQ04656 1500 aa39.69■■■■□ 3.94
GADD45A-205ENST00000617962 MTUS2Q5JR59 1369 aa39.69■■■■□ 3.94
GADD45A-205ENST00000617962 PTPRTO14522 1441 aa39.66■■■■□ 3.94
GADD45A-205ENST00000617962 MROH2AA6NES4 1674 aa39.66■■■■□ 3.94
GADD45A-205ENST00000617962 INO80Q9ULG1 1556 aaPredicted RBP39.64■■■■□ 3.94
GADD45A-205ENST00000617962 ZMYM3Q14202 1370 aa39.61■■■■□ 3.93
GADD45A-205ENST00000617962 NPATQ14207 1427 aa39.61■■■■□ 3.93
GADD45A-205ENST00000617962 A2MP01023 1474 aa39.6■■■■□ 3.93
GADD45A-205ENST00000617962 PLXNC1O60486 1568 aa39.59■■■■□ 3.93
GADD45A-205ENST00000617962 NCOA1Q15788 1441 aa39.58■■■■□ 3.93
GADD45A-205ENST00000617962 CLTCQ00610 1675 aaKnown RBP39.55■■■■□ 3.92
GADD45A-205ENST00000617962 TIAM1Q13009 1591 aa39.54■■■■□ 3.92
GADD45A-205ENST00000617962 ZNF644Q9H582 1327 aaPredicted RBP39.53■■■■□ 3.92
GADD45A-205ENST00000617962 CAMSAP1Q5T5Y3 1602 aa39.51■■■■□ 3.92
GADD45A-205ENST00000617962 EHBP1L1Q8N3D4 1523 aa39.5■■■■□ 3.91
GADD45A-205ENST00000617962 GGT6Q6P531 493 aa39.5■■■■□ 3.91
GADD45A-205ENST00000617962 ADGBQ8N7X0 1667 aa39.47■■■■□ 3.91
GADD45A-205ENST00000617962 LTBP4Q8N2S1 1624 aa39.47■■■■□ 3.91
GADD45A-205ENST00000617962 MBD5Q9P267 1494 aa39.45■■■■□ 3.91
GADD45A-205ENST00000617962 CEP162Q5TB80 1403 aa39.43■■■■□ 3.9
GADD45A-205ENST00000617962 PTPRKQ15262 1439 aa39.42■■■■□ 3.9
GADD45A-205ENST00000617962 MYO3AQ8NEV4 1616 aa39.41■■■■□ 3.9
GADD45A-205ENST00000617962 NCKAP5LQ9HCH0 1330 aa39.4■■■■□ 3.9
GADD45A-205ENST00000617962 ZNF142P52746 1687 aaPredicted RBP39.38■■■■□ 3.89
GADD45A-205ENST00000617962 PPP6R1Q9UPN7 881 aa39.37■■■■□ 3.89
GADD45A-205ENST00000617962 RTEL1-TNFRSF6BF6WH68 1400 aa39.36■■■■□ 3.89
GADD45A-205ENST00000617962 CEP170BQ9Y4F5 1589 aaPredicted RBP39.34■■■■□ 3.89
GADD45A-205ENST00000617962 IQSEC2Q5JU85 1478 aa39.32■■■■□ 3.89
GADD45A-205ENST00000617962 DHX29Q7Z478 1369 aaKnown RBP39.31■■■■□ 3.88
GADD45A-205ENST00000617962 PLA2R1Q13018 1463 aa39.3■■■■□ 3.88
GADD45A-205ENST00000617962 NCOA2Q15596 1464 aa39.28■■■■□ 3.88
GADD45A-205ENST00000617962 PKD2Q13563 968 aa39.27■■■■□ 3.88
GADD45A-205ENST00000617962 DISP3Q9P2K9 1392 aa39.26■■■■□ 3.88
GADD45A-205ENST00000617962 CAMSAP2Q08AD1 1489 aa39.25■■■■□ 3.87
GADD45A-205ENST00000617962 CCDC141Q6ZP82 1450 aa39.25■■■■□ 3.87
GADD45A-205ENST00000617962 ZNF335Q9H4Z2 1342 aaPredicted RBP39.25■■■■□ 3.87
GADD45A-205ENST00000617962 TCOF1Q13428 1488 aaKnown RBP39.24■■■■□ 3.87
GADD45A-205ENST00000617962 KIF3BO15066 747 aa39.22■■■■□ 3.87
GADD45A-205ENST00000617962 A2ML1A8K2U0 1454 aa39.19■■■■□ 3.86
GADD45A-205ENST00000617962 RSPH4AQ5TD94 716 aa39.17■■■■□ 3.86
GADD45A-205ENST00000617962 DNMT1P26358 1616 aaKnown RBP39.15■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms