RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 CHMP4BQ9H444 224 aaKnown RBP23.92■■□□□ 1.42
AC008878.3-201ENST00000617428 MS4A1P11836 297 aa23.91■■□□□ 1.42
AC008878.3-201ENST00000617428 CDK11BP21127 795 aaKnown RBP23.91■■□□□ 1.42
AC008878.3-201ENST00000617428 GOLGA6L22H0YM25 854 aa23.9■■□□□ 1.42
AC008878.3-201ENST00000617428 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
AC008878.3-201ENST00000617428 TPRNQ4KMQ1 711 aa23.87■■□□□ 1.41
AC008878.3-201ENST00000617428 RTF1Q92541 710 aaKnown RBP23.87■■□□□ 1.41
AC008878.3-201ENST00000617428 PPP4R2Q9NY27 417 aa23.86■■□□□ 1.41
AC008878.3-201ENST00000617428 TAOK2Q9UL54 1235 aa23.86■■□□□ 1.41
AC008878.3-201ENST00000617428 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
AC008878.3-201ENST00000617428 WASHC2CQ9Y4E1 1318 aa23.85■■□□□ 1.41
AC008878.3-201ENST00000617428 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
AC008878.3-201ENST00000617428 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
AC008878.3-201ENST00000617428 ROCK2O75116 1388 aaKnown RBP23.84■■□□□ 1.41
AC008878.3-201ENST00000617428 CSB-PGBD3P0DP91 1061 aa23.83■■□□□ 1.4
AC008878.3-201ENST00000617428 U2AF1L5P0DN76 240 aaPredicted RBP23.82■■□□□ 1.4
AC008878.3-201ENST00000617428 U2AF1Q01081 240 aaKnown RBP eCLIP23.82■■□□□ 1.4
AC008878.3-201ENST00000617428 GOLGA2Q08379 1002 aa23.82■■□□□ 1.4
AC008878.3-201ENST00000617428 FGD1P98174 961 aa23.81■■□□□ 1.4
AC008878.3-201ENST00000617428 KCNJ4P48050 445 aa23.81■■□□□ 1.4
AC008878.3-201ENST00000617428 ZRSR1Q15695 479 aaKnown RBP23.8■■□□□ 1.4
AC008878.3-201ENST00000617428 B4GALNT3Q6L9W6 998 aa23.8■■□□□ 1.4
AC008878.3-201ENST00000617428 RAPGEF2Q9Y4G8 1499 aa23.8■■□□□ 1.4
AC008878.3-201ENST00000617428 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
AC008878.3-201ENST00000617428 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
AC008878.3-201ENST00000617428 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
AC008878.3-201ENST00000617428 EID1Q9Y6B2 187 aa23.77■■□□□ 1.4
AC008878.3-201ENST00000617428 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
AC008878.3-201ENST00000617428 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
AC008878.3-201ENST00000617428 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
AC008878.3-201ENST00000617428 WIZO95785 1651 aa23.75■■□□□ 1.39
AC008878.3-201ENST00000617428 TULP1O00294 542 aaPredicted RBP23.74■■□□□ 1.39
AC008878.3-201ENST00000617428 ANP32EQ9BTT0 268 aa23.74■■□□□ 1.39
AC008878.3-201ENST00000617428 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
AC008878.3-201ENST00000617428 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
AC008878.3-201ENST00000617428 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
AC008878.3-201ENST00000617428 NAP1L2Q9ULW6 460 aaPredicted RBP23.72■■□□□ 1.39
AC008878.3-201ENST00000617428 TRIM44Q96DX7 344 aaPredicted RBP23.7■■□□□ 1.38
AC008878.3-201ENST00000617428 NGDNQ8NEJ9 315 aaKnown RBP23.69■■□□□ 1.38
AC008878.3-201ENST00000617428 TERF2IPQ9NYB0 399 aa23.68■■□□□ 1.38
AC008878.3-201ENST00000617428 APBB1O00213 710 aa23.68■■□□□ 1.38
AC008878.3-201ENST00000617428 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
AC008878.3-201ENST00000617428 CCDC9Q9Y3X0 531 aaKnown RBP23.66■■□□□ 1.38
AC008878.3-201ENST00000617428 TRAK1Q9UPV9 953 aa23.65■■□□□ 1.38
AC008878.3-201ENST00000617428 PTPRGP23470 1445 aa23.65■■□□□ 1.38
AC008878.3-201ENST00000617428 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.38
AC008878.3-201ENST00000617428 RALBP1Q15311 655 aa23.64■■□□□ 1.38
AC008878.3-201ENST00000617428 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
AC008878.3-201ENST00000617428 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
AC008878.3-201ENST00000617428 HSP90AB1P08238 724 aaKnown RBP23.63■■□□□ 1.37
AC008878.3-201ENST00000617428 EIF3AQ14152 1382 aaKnown RBP23.63■■□□□ 1.37
AC008878.3-201ENST00000617428 CALD1Q05682 793 aaKnown RBP23.62■■□□□ 1.37
AC008878.3-201ENST00000617428 PTMAP06454 111 aaKnown RBP23.62■■□□□ 1.37
AC008878.3-201ENST00000617428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.375e-7■□□□□ 9.6
AC008878.3-201ENST00000617428 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.36
AC008878.3-201ENST00000617428 AMPHP49418 695 aa23.56■■□□□ 1.36
AC008878.3-201ENST00000617428 PLCB2Q00722 1185 aa23.55■■□□□ 1.36
AC008878.3-201ENST00000617428 RCAN3Q9UKA8 241 aa23.54■■□□□ 1.36
AC008878.3-201ENST00000617428 STK31Q9BXU1 1019 aa23.54■■□□□ 1.36
AC008878.3-201ENST00000617428 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
AC008878.3-201ENST00000617428 ISY1Q9ULR0 285 aaKnown RBP23.52■■□□□ 1.36
AC008878.3-201ENST00000617428 ST20-MTHFSA0A0A6YYL1 179 aa23.51■■□□□ 1.35
AC008878.3-201ENST00000617428 CCDC146Q8IYE0 955 aa23.5■■□□□ 1.35
AC008878.3-201ENST00000617428 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
AC008878.3-201ENST00000617428 MCCP23508 829 aa23.5■■□□□ 1.35
AC008878.3-201ENST00000617428 NLRP13Q86W25 1043 aa23.49■■□□□ 1.35
AC008878.3-201ENST00000617428 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
AC008878.3-201ENST00000617428 HSCBQ8IWL3 235 aa23.49■■□□□ 1.35
AC008878.3-201ENST00000617428 GOLGA6L4A6NEF3 574 aa23.48■■□□□ 1.35
AC008878.3-201ENST00000617428 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
AC008878.3-201ENST00000617428 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
AC008878.3-201ENST00000617428 SMC4Q9NTJ3 1288 aa23.47■■□□□ 1.35
AC008878.3-201ENST00000617428 CLUAP1Q96AJ1 413 aa23.45■■□□□ 1.34
AC008878.3-201ENST00000617428 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
AC008878.3-201ENST00000617428 KIAA1211Q6ZU35 1233 aa23.45■■□□□ 1.34
AC008878.3-201ENST00000617428 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
AC008878.3-201ENST00000617428 DNTTIP2Q5QJE6 756 aaKnown RBP23.44■■□□□ 1.34
AC008878.3-201ENST00000617428 SPRYD3Q8NCJ5 442 aa23.44■■□□□ 1.34
AC008878.3-201ENST00000617428 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
AC008878.3-201ENST00000617428 SLC4A10Q6U841 1118 aa23.43■■□□□ 1.34
AC008878.3-201ENST00000617428 NOP58Q9Y2X3 529 aaKnown RBP23.42■■□□□ 1.34
AC008878.3-201ENST00000617428 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
AC008878.3-201ENST00000617428 PANK3Q9H999 370 aa23.4■■□□□ 1.34
AC008878.3-201ENST00000617428 GORABQ5T7V8 394 aa23.4■■□□□ 1.34
AC008878.3-201ENST00000617428 CFAP44Q96MT7 982 aa23.39■■□□□ 1.34
AC008878.3-201ENST00000617428 TAF7LQ5H9L4 462 aa23.38■■□□□ 1.33
AC008878.3-201ENST00000617428 MINK1Q8N4C8 1332 aaPredicted RBP23.38■■□□□ 1.33
AC008878.3-201ENST00000617428 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
AC008878.3-201ENST00000617428 RRP7AQ9Y3A4 280 aaKnown RBP23.37■■□□□ 1.33
AC008878.3-201ENST00000617428 IGF1RP08069 1367 aa23.37■■□□□ 1.33
AC008878.3-201ENST00000617428 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
AC008878.3-201ENST00000617428 TMX4Q9H1E5 349 aaPredicted RBP23.36■■□□□ 1.33
AC008878.3-201ENST00000617428 GLIPR1L2Q4G1C9 344 aa23.35■■□□□ 1.33
AC008878.3-201ENST00000617428 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
AC008878.3-201ENST00000617428 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
AC008878.3-201ENST00000617428 COG3Q96JB2 828 aa23.34■■□□□ 1.33
AC008878.3-201ENST00000617428 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
AC008878.3-201ENST00000617428 EVC2Q86UK5 1308 aa23.32■■□□□ 1.32
AC008878.3-201ENST00000617428 ELL2O00472 640 aaPredicted RBP23.32■■□□□ 1.32
AC008878.3-201ENST00000617428 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms