RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 ABCC10Q5T3U5 1492 aa15.13■□□□□ 0.01
LINC00598-207ENST00000616706 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
LINC00598-207ENST00000616706 MIA2Q96PC5 1412 aa15.11■□□□□ 0.01
LINC00598-207ENST00000616706 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
LINC00598-207ENST00000616706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00598-207ENST00000616706 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
LINC00598-207ENST00000616706 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
LINC00598-207ENST00000616706 HFM1A2PYH4 1435 aa15.08■□□□□ 0
LINC00598-207ENST00000616706 TCOF1Q13428 1488 aaKnown RBP15.08■□□□□ 0
LINC00598-207ENST00000616706 MIER1Q8N108 512 aa15.07■□□□□ 0
LINC00598-207ENST00000616706 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
LINC00598-207ENST00000616706 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
LINC00598-207ENST00000616706 NEUROD1Q13562 356 aa15.07■□□□□ 0
LINC00598-207ENST00000616706 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
LINC00598-207ENST00000616706 CDC42BPAQ5VT25 1732 aa15.05■□□□□ -0
LINC00598-207ENST00000616706 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00598-207ENST00000616706 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
LINC00598-207ENST00000616706 ITSN2Q9NZM3 1697 aa15.04■□□□□ -0
LINC00598-207ENST00000616706 PLCH2O75038 1416 aa15.04■□□□□ -0
LINC00598-207ENST00000616706 NAIPQ13075 1403 aa15.04■□□□□ -0
LINC00598-207ENST00000616706 ARHGAP5Q13017 1502 aa15.03■□□□□ -0
LINC00598-207ENST00000616706 CAMSAP2Q08AD1 1489 aa15.03■□□□□ -0
LINC00598-207ENST00000616706 FAM69CQ0P6D2 419 aa15.02■□□□□ -0
LINC00598-207ENST00000616706 SIN3AQ96ST3 1273 aa15.02□□□□□ -0.01
LINC00598-207ENST00000616706 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
LINC00598-207ENST00000616706 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
LINC00598-207ENST00000616706 CD109Q6YHK3 1445 aa15□□□□□ -0.01
LINC00598-207ENST00000616706 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
LINC00598-207ENST00000616706 MYO5CQ9NQX4 1742 aa14.99□□□□□ -0.01
LINC00598-207ENST00000616706 KDM6BO15054 1643 aa14.99□□□□□ -0.01
LINC00598-207ENST00000616706 RRP7BPQ9NSQ0 103 aa14.99□□□□□ -0.01
LINC00598-207ENST00000616706 ABCA9Q8IUA7 1624 aa14.98□□□□□ -0.01
LINC00598-207ENST00000616706 ABCC5O15440 1437 aa14.98□□□□□ -0.01
LINC00598-207ENST00000616706 DAPK1P53355 1430 aa14.98□□□□□ -0.01
LINC00598-207ENST00000616706 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
LINC00598-207ENST00000616706 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
LINC00598-207ENST00000616706 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
LINC00598-207ENST00000616706 AKNAQ7Z591 1439 aa14.96□□□□□ -0.01
LINC00598-207ENST00000616706 SAMD9LQ8IVG5 1584 aa14.96□□□□□ -0.02
LINC00598-207ENST00000616706 FANCAO15360 1455 aa14.95□□□□□ -0.02
LINC00598-207ENST00000616706 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
LINC00598-207ENST00000616706 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
LINC00598-207ENST00000616706 MBD5Q9P267 1494 aa14.93□□□□□ -0.02
LINC00598-207ENST00000616706 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
LINC00598-207ENST00000616706 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
LINC00598-207ENST00000616706 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
LINC00598-207ENST00000616706 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
LINC00598-207ENST00000616706 ARAP3Q8WWN8 1544 aa14.91□□□□□ -0.02
LINC00598-207ENST00000616706 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
LINC00598-207ENST00000616706 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
LINC00598-207ENST00000616706 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
LINC00598-207ENST00000616706 CROCC2H7BZ55 1655 aa14.9□□□□□ -0.02
LINC00598-207ENST00000616706 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
LINC00598-207ENST00000616706 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 DIP2BQ9P265 1576 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 MYT1LQ9UL68 1186 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 TRAPPC8Q9Y2L5 1435 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 GLI2P10070 1586 aa14.89□□□□□ -0.03
LINC00598-207ENST00000616706 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
LINC00598-207ENST00000616706 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
LINC00598-207ENST00000616706 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
LINC00598-207ENST00000616706 ROCK1Q13464 1354 aa14.87□□□□□ -0.03
LINC00598-207ENST00000616706 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
LINC00598-207ENST00000616706 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
LINC00598-207ENST00000616706 ARHGEF5Q12774 1597 aa14.87□□□□□ -0.03
LINC00598-207ENST00000616706 ABCC1P33527 1531 aa14.87□□□□□ -0.03
LINC00598-207ENST00000616706 NCOA1Q15788 1441 aa14.87□□□□□ -0.03
LINC00598-207ENST00000616706 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
LINC00598-207ENST00000616706 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
LINC00598-207ENST00000616706 SPAG9O60271 1321 aaKnown RBP14.85□□□□□ -0.03
LINC00598-207ENST00000616706 MAP3K4Q9Y6R4 1608 aa14.85□□□□□ -0.03
LINC00598-207ENST00000616706 RAPGEF3O95398 923 aa14.84□□□□□ -0.03
LINC00598-207ENST00000616706 TSPOAP1O95153 1857 aa14.84□□□□□ -0.03
LINC00598-207ENST00000616706 TRIM52Q96A61 297 aa14.83□□□□□ -0.03
LINC00598-207ENST00000616706 SHANK2Q9UPX8 1470 aa14.83□□□□□ -0.04
LINC00598-207ENST00000616706 NEO1Q92859 1461 aa14.82□□□□□ -0.04
LINC00598-207ENST00000616706 ADGRL2O95490 1459 aa14.81□□□□□ -0.04
LINC00598-207ENST00000616706 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
LINC00598-207ENST00000616706 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
LINC00598-207ENST00000616706 CFAP74Q9C0B2 1584 aa14.8□□□□□ -0.04
LINC00598-207ENST00000616706 ANKRD50Q9ULJ7 1429 aa14.78□□□□□ -0.04
LINC00598-207ENST00000616706 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
LINC00598-207ENST00000616706 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.04
LINC00598-207ENST00000616706 POGZQ7Z3K3 1410 aa14.76□□□□□ -0.05
LINC00598-207ENST00000616706 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
LINC00598-207ENST00000616706 RTEL1-TNFRSF6BF6WH68 1400 aa14.76□□□□□ -0.05
LINC00598-207ENST00000616706 PPRC1Q5VV67 1664 aaKnown RBP14.75□□□□□ -0.05
LINC00598-207ENST00000616706 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
LINC00598-207ENST00000616706 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
LINC00598-207ENST00000616706 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
LINC00598-207ENST00000616706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
LINC00598-207ENST00000616706 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
LINC00598-207ENST00000616706 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.05
LINC00598-207ENST00000616706 PZPP20742 1482 aa14.71□□□□□ -0.06
LINC00598-207ENST00000616706 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
LINC00598-207ENST00000616706 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
LINC00598-207ENST00000616706 FOXD1Q16676 465 aa14.7□□□□□ -0.06
LINC00598-207ENST00000616706 RPRD2Q5VT52 1461 aaKnown RBP14.7□□□□□ -0.06
LINC00598-207ENST00000616706 NUP155O75694 1391 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms