RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
TPT1-214ENST00000616577 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
TPT1-214ENST00000616577 FHOD3Q2V2M9 1422 aa13.42□□□□□ -0.26
TPT1-214ENST00000616577 RALBP1Q15311 655 aa13.42□□□□□ -0.26
TPT1-214ENST00000616577 A0A0G2JS52 829 aa13.42□□□□□ -0.26
TPT1-214ENST00000616577 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
TPT1-214ENST00000616577 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
TPT1-214ENST00000616577 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
TPT1-214ENST00000616577 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
TPT1-214ENST00000616577 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
TPT1-214ENST00000616577 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
TPT1-214ENST00000616577 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
TPT1-214ENST00000616577 CHMP4BQ9H444 224 aaKnown RBP13.38□□□□□ -0.27
TPT1-214ENST00000616577 SOX12O15370 315 aa13.37□□□□□ -0.27
TPT1-214ENST00000616577 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
TPT1-214ENST00000616577 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
TPT1-214ENST00000616577 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
TPT1-214ENST00000616577 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
TPT1-214ENST00000616577 PRKRIP1Q9H875 184 aaPredicted RBP13.36□□□□□ -0.27
TPT1-214ENST00000616577 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
TPT1-214ENST00000616577 STK26Q9P289 416 aa13.34□□□□□ -0.27
TPT1-214ENST00000616577 KANK1Q14678 1352 aa13.34□□□□□ -0.27
TPT1-214ENST00000616577 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
TPT1-214ENST00000616577 L1TD1Q5T7N2 865 aaKnown RBP13.34□□□□□ -0.27
TPT1-214ENST00000616577 GGT6Q6P531 493 aa13.34□□□□□ -0.27
TPT1-214ENST00000616577 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
TPT1-214ENST00000616577 PNNQ9H307 717 aaKnown RBP13.34□□□□□ -0.27
TPT1-214ENST00000616577 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
TPT1-214ENST00000616577 APBB1O00213 710 aa13.33□□□□□ -0.27
TPT1-214ENST00000616577 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
TPT1-214ENST00000616577 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
TPT1-214ENST00000616577 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
TPT1-214ENST00000616577 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.28
TPT1-214ENST00000616577 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
TPT1-214ENST00000616577 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
TPT1-214ENST00000616577 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
TPT1-214ENST00000616577 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■■□ 24.1
TPT1-214ENST00000616577 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
TPT1-214ENST00000616577 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
TPT1-214ENST00000616577 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
TPT1-214ENST00000616577 KCNJ4P48050 445 aa13.3□□□□□ -0.28
TPT1-214ENST00000616577 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
TPT1-214ENST00000616577 PLIN1O60240 522 aa13.29□□□□□ -0.28
TPT1-214ENST00000616577 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
TPT1-214ENST00000616577 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
TPT1-214ENST00000616577 FGD1P98174 961 aa13.28□□□□□ -0.28
TPT1-214ENST00000616577 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
TPT1-214ENST00000616577 MLECQ14165 292 aa13.28□□□□□ -0.28
TPT1-214ENST00000616577 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.28
TPT1-214ENST00000616577 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
TPT1-214ENST00000616577 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
TPT1-214ENST00000616577 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
TPT1-214ENST00000616577 PDE4AP27815 886 aa13.26□□□□□ -0.29
TPT1-214ENST00000616577 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
TPT1-214ENST00000616577 MSNP26038 577 aaKnown RBP13.26□□□□□ -0.29
TPT1-214ENST00000616577 EFCAB2Q5VUJ9 269 aa13.25□□□□□ -0.29
TPT1-214ENST00000616577 SMC4Q9NTJ3 1288 aa13.25□□□□□ -0.29
TPT1-214ENST00000616577 CADPSQ9ULU8 1353 aa13.25□□□□□ -0.29
TPT1-214ENST00000616577 PANK3Q9H999 370 aa13.25□□□□□ -0.29
TPT1-214ENST00000616577 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
TPT1-214ENST00000616577 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
TPT1-214ENST00000616577 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
TPT1-214ENST00000616577 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
TPT1-214ENST00000616577 KIF3BO15066 747 aa13.24□□□□□ -0.29
TPT1-214ENST00000616577 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
TPT1-214ENST00000616577 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
TPT1-214ENST00000616577 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
TPT1-214ENST00000616577 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
TPT1-214ENST00000616577 RRP1P56182 461 aaKnown RBP13.23□□□□□ -0.29
TPT1-214ENST00000616577 RRP7AQ9Y3A4 280 aaKnown RBP13.23□□□□□ -0.29
TPT1-214ENST00000616577 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
TPT1-214ENST00000616577 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
TPT1-214ENST00000616577 MCCP23508 829 aa13.22□□□□□ -0.29
TPT1-214ENST00000616577 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
TPT1-214ENST00000616577 CRBNQ96SW2 442 aa13.21□□□□□ -0.29
TPT1-214ENST00000616577 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
TPT1-214ENST00000616577 USP47Q96K76 1375 aa13.21□□□□□ -0.29
TPT1-214ENST00000616577 RTF1Q92541 710 aaKnown RBP13.21□□□□□ -0.3
TPT1-214ENST00000616577 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.3
TPT1-214ENST00000616577 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
TPT1-214ENST00000616577 NUTM2DQ5VT03 806 aaPredicted RBP13.2□□□□□ -0.3
TPT1-214ENST00000616577 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
TPT1-214ENST00000616577 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
TPT1-214ENST00000616577 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
TPT1-214ENST00000616577 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
TPT1-214ENST00000616577 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
TPT1-214ENST00000616577 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
TPT1-214ENST00000616577 EIF3AQ14152 1382 aaKnown RBP13.17□□□□□ -0.3
TPT1-214ENST00000616577 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
TPT1-214ENST00000616577 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
TPT1-214ENST00000616577 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
TPT1-214ENST00000616577 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
TPT1-214ENST00000616577 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
TPT1-214ENST00000616577 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
TPT1-214ENST00000616577 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 APAF1O14727 1248 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
TPT1-214ENST00000616577 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 ARID3AQ99856 593 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms