RNA–Protein interactions for RNA: ENST00000616306.1

UBXN8-208, Transcript of UBX domain protein 8, humanhuman

TSL 5

Gene UBXN8, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-208ENST00000616306 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
UBXN8-208ENST00000616306 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
UBXN8-208ENST00000616306 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
UBXN8-208ENST00000616306 MAP3K4Q9Y6R4 1608 aa16.75■□□□□ 0.27
UBXN8-208ENST00000616306 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
UBXN8-208ENST00000616306 KDM6BO15054 1643 aa16.74■□□□□ 0.27
UBXN8-208ENST00000616306 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBXN8-208ENST00000616306 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
UBXN8-208ENST00000616306 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
UBXN8-208ENST00000616306 ATP10BO94823 1461 aa16.71■□□□□ 0.27
UBXN8-208ENST00000616306 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
UBXN8-208ENST00000616306 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
UBXN8-208ENST00000616306 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
UBXN8-208ENST00000616306 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
UBXN8-208ENST00000616306 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
UBXN8-208ENST00000616306 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
UBXN8-208ENST00000616306 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
UBXN8-208ENST00000616306 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
UBXN8-208ENST00000616306 CD109Q6YHK3 1445 aa16.64■□□□□ 0.25
UBXN8-208ENST00000616306 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
UBXN8-208ENST00000616306 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
UBXN8-208ENST00000616306 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
UBXN8-208ENST00000616306 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
UBXN8-208ENST00000616306 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
UBXN8-208ENST00000616306 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
UBXN8-208ENST00000616306 FMN1Q68DA7 1419 aa16.58■□□□□ 0.24
UBXN8-208ENST00000616306 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
UBXN8-208ENST00000616306 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
UBXN8-208ENST00000616306 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
UBXN8-208ENST00000616306 FKBP8Q14318 412 aa16.54■□□□□ 0.24
UBXN8-208ENST00000616306 HECW1Q76N89 1606 aa16.52■□□□□ 0.24
UBXN8-208ENST00000616306 PHLDB1Q86UU1 1377 aa16.52■□□□□ 0.24
UBXN8-208ENST00000616306 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
UBXN8-208ENST00000616306 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
UBXN8-208ENST00000616306 NEO1Q92859 1461 aa16.48■□□□□ 0.23
UBXN8-208ENST00000616306 HAX1O00165 279 aa16.46■□□□□ 0.23
UBXN8-208ENST00000616306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBXN8-208ENST00000616306 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
UBXN8-208ENST00000616306 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
UBXN8-208ENST00000616306 PROM2Q8N271 834 aa16.44■□□□□ 0.22
UBXN8-208ENST00000616306 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
UBXN8-208ENST00000616306 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
UBXN8-208ENST00000616306 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
UBXN8-208ENST00000616306 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
UBXN8-208ENST00000616306 CLIP1P30622 1438 aa16.42■□□□□ 0.22
UBXN8-208ENST00000616306 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
UBXN8-208ENST00000616306 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
UBXN8-208ENST00000616306 FANCAO15360 1455 aa16.39■□□□□ 0.21
UBXN8-208ENST00000616306 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
UBXN8-208ENST00000616306 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
UBXN8-208ENST00000616306 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
UBXN8-208ENST00000616306 AKNAQ7Z591 1439 aa16.37■□□□□ 0.21
UBXN8-208ENST00000616306 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
UBXN8-208ENST00000616306 KIF14Q15058 1648 aa16.37■□□□□ 0.21
UBXN8-208ENST00000616306 PLCH2O75038 1416 aa16.36■□□□□ 0.21
UBXN8-208ENST00000616306 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
UBXN8-208ENST00000616306 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
UBXN8-208ENST00000616306 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
UBXN8-208ENST00000616306 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
UBXN8-208ENST00000616306 RICTORQ6R327 1708 aa16.34■□□□□ 0.21
UBXN8-208ENST00000616306 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
UBXN8-208ENST00000616306 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
UBXN8-208ENST00000616306 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
UBXN8-208ENST00000616306 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
UBXN8-208ENST00000616306 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
UBXN8-208ENST00000616306 ARHGEF40Q8TER5 1519 aa16.27■□□□□ 0.2
UBXN8-208ENST00000616306 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.19
UBXN8-208ENST00000616306 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.19
UBXN8-208ENST00000616306 CDC42BPBQ9Y5S2 1711 aa16.26■□□□□ 0.19
UBXN8-208ENST00000616306 POGZQ7Z3K3 1410 aa16.26■□□□□ 0.19
UBXN8-208ENST00000616306 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
UBXN8-208ENST00000616306 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
UBXN8-208ENST00000616306 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
UBXN8-208ENST00000616306 EVX2Q03828 476 aa16.22■□□□□ 0.19
UBXN8-208ENST00000616306 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
UBXN8-208ENST00000616306 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
UBXN8-208ENST00000616306 ADAMTSL3P82987 1691 aa16.21■□□□□ 0.19
UBXN8-208ENST00000616306 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
UBXN8-208ENST00000616306 ZNF518AQ6AHZ1 1483 aa16.21■□□□□ 0.19
UBXN8-208ENST00000616306 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
UBXN8-208ENST00000616306 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
UBXN8-208ENST00000616306 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
UBXN8-208ENST00000616306 KDM5CP41229 1560 aa16.18■□□□□ 0.18
UBXN8-208ENST00000616306 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
UBXN8-208ENST00000616306 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
UBXN8-208ENST00000616306 ABCC1P33527 1531 aa16.16■□□□□ 0.18
UBXN8-208ENST00000616306 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
UBXN8-208ENST00000616306 ATP10AO60312 1499 aa16.15■□□□□ 0.18
UBXN8-208ENST00000616306 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.18
UBXN8-208ENST00000616306 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
UBXN8-208ENST00000616306 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
UBXN8-208ENST00000616306 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
UBXN8-208ENST00000616306 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
UBXN8-208ENST00000616306 CD44P16070 742 aaKnown RBP16.13■□□□□ 0.17
UBXN8-208ENST00000616306 PTPRMP28827 1452 aa16.13■□□□□ 0.17
UBXN8-208ENST00000616306 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
UBXN8-208ENST00000616306 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
UBXN8-208ENST00000616306 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
UBXN8-208ENST00000616306 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
UBXN8-208ENST00000616306 MLH3Q9UHC1 1453 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms