RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
PPP4R3B-205ENST00000616288 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
PPP4R3B-205ENST00000616288 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
PPP4R3B-205ENST00000616288 TPM2P07951 284 aa17.33■□□□□ 0.37
PPP4R3B-205ENST00000616288 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.37
PPP4R3B-205ENST00000616288 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
PPP4R3B-205ENST00000616288 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
PPP4R3B-205ENST00000616288 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
PPP4R3B-205ENST00000616288 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
PPP4R3B-205ENST00000616288 KIAA1211Q6ZU35 1233 aa17.32■□□□□ 0.36
PPP4R3B-205ENST00000616288 ESPNB1AK53 854 aa17.31■□□□□ 0.36
PPP4R3B-205ENST00000616288 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
PPP4R3B-205ENST00000616288 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
PPP4R3B-205ENST00000616288 ARID3CA6NKF2 412 aa17.3■□□□□ 0.36
PPP4R3B-205ENST00000616288 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
PPP4R3B-205ENST00000616288 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
PPP4R3B-205ENST00000616288 PDCL3Q9H2J4 239 aa17.29■□□□□ 0.36
PPP4R3B-205ENST00000616288 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
PPP4R3B-205ENST00000616288 MRE11P49959 708 aa17.27■□□□□ 0.36
PPP4R3B-205ENST00000616288 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3B-205ENST00000616288 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
PPP4R3B-205ENST00000616288 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
PPP4R3B-205ENST00000616288 MAP7D2Q96T17 732 aa17.23■□□□□ 0.35
PPP4R3B-205ENST00000616288 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
PPP4R3B-205ENST00000616288 MROH2BQ7Z745 1585 aa17.22■□□□□ 0.35
PPP4R3B-205ENST00000616288 FOXD1Q16676 465 aa17.21■□□□□ 0.35
PPP4R3B-205ENST00000616288 TRAK2O60296 914 aa17.21■□□□□ 0.35
PPP4R3B-205ENST00000616288 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
PPP4R3B-205ENST00000616288 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
PPP4R3B-205ENST00000616288 CLCN1P35523 988 aa17.2■□□□□ 0.34
PPP4R3B-205ENST00000616288 ZNF771Q7L3S4 317 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3B-205ENST00000616288 PANK2Q9BZ23 570 aa17.19■□□□□ 0.34
PPP4R3B-205ENST00000616288 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
PPP4R3B-205ENST00000616288 TNNT3P45378 269 aaPredicted RBP17.18■□□□□ 0.34
PPP4R3B-205ENST00000616288 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
PPP4R3B-205ENST00000616288 GRPEL1Q9HAV7 217 aa17.15■□□□□ 0.34
PPP4R3B-205ENST00000616288 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
PPP4R3B-205ENST00000616288 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
PPP4R3B-205ENST00000616288 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.34
PPP4R3B-205ENST00000616288 AAMPQ13685 434 aa17.14■□□□□ 0.33
PPP4R3B-205ENST00000616288 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
PPP4R3B-205ENST00000616288 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3B-205ENST00000616288 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-205ENST00000616288 FGD1P98174 961 aa17.12■□□□□ 0.33
PPP4R3B-205ENST00000616288 CHMP5Q9NZZ3 219 aa17.12■□□□□ 0.33
PPP4R3B-205ENST00000616288 WIZO95785 1651 aa17.11■□□□□ 0.33
PPP4R3B-205ENST00000616288 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
PPP4R3B-205ENST00000616288 UQCRHP07919 91 aa17.11■□□□□ 0.33
PPP4R3B-205ENST00000616288 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
PPP4R3B-205ENST00000616288 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
PPP4R3B-205ENST00000616288 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3B-205ENST00000616288 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
PPP4R3B-205ENST00000616288 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
PPP4R3B-205ENST00000616288 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
PPP4R3B-205ENST00000616288 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
PPP4R3B-205ENST00000616288 KIF21BO75037 1637 aa17.07■□□□□ 0.32
PPP4R3B-205ENST00000616288 MCM4P33991 863 aa17.07■□□□□ 0.32
PPP4R3B-205ENST00000616288 PLCD3Q8N3E9 789 aa17.07■□□□□ 0.32
PPP4R3B-205ENST00000616288 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
PPP4R3B-205ENST00000616288 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
PPP4R3B-205ENST00000616288 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
PPP4R3B-205ENST00000616288 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
PPP4R3B-205ENST00000616288 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-205ENST00000616288 CBX1P83916 185 aa17.03■□□□□ 0.32
PPP4R3B-205ENST00000616288 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
PPP4R3B-205ENST00000616288 PTMSP20962 102 aa17.02■□□□□ 0.31
PPP4R3B-205ENST00000616288 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.31
PPP4R3B-205ENST00000616288 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
PPP4R3B-205ENST00000616288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
PPP4R3B-205ENST00000616288 ZSCAN30Q86W11 494 aa17■□□□□ 0.31
PPP4R3B-205ENST00000616288 RALBP1Q15311 655 aa17■□□□□ 0.31
PPP4R3B-205ENST00000616288 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
PPP4R3B-205ENST00000616288 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
PPP4R3B-205ENST00000616288 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
PPP4R3B-205ENST00000616288 CCDC173Q0VFZ6 552 aa16.98■□□□□ 0.31
PPP4R3B-205ENST00000616288 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
PPP4R3B-205ENST00000616288 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
PPP4R3B-205ENST00000616288 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
PPP4R3B-205ENST00000616288 MPNDQ8N594 471 aa16.97■□□□□ 0.31
PPP4R3B-205ENST00000616288 VGLL3A8MV65 326 aa16.97■□□□□ 0.31
PPP4R3B-205ENST00000616288 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
PPP4R3B-205ENST00000616288 FOXD4L5Q5VV16 416 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3B-205ENST00000616288 FOXD4L4Q8WXT5 416 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3B-205ENST00000616288 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
PPP4R3B-205ENST00000616288 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
PPP4R3B-205ENST00000616288 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
PPP4R3B-205ENST00000616288 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
PPP4R3B-205ENST00000616288 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
PPP4R3B-205ENST00000616288 E9PSI1 815 aa16.94■□□□□ 0.3
PPP4R3B-205ENST00000616288 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
PPP4R3B-205ENST00000616288 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
PPP4R3B-205ENST00000616288 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
PPP4R3B-205ENST00000616288 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
PPP4R3B-205ENST00000616288 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms