RNA–Protein interactions for RNA: ENST00000616094.1

CREB3L1-205, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

TSL 1 (best)

Gene CREB3L1, Length 1,817 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-205ENST00000616094 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
CREB3L1-205ENST00000616094 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
CREB3L1-205ENST00000616094 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
CREB3L1-205ENST00000616094 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.59
CREB3L1-205ENST00000616094 CCDC7Q96M83 1385 aa18.72■□□□□ 0.59
CREB3L1-205ENST00000616094 ABCC5O15440 1437 aa18.72■□□□□ 0.59
CREB3L1-205ENST00000616094 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
CREB3L1-205ENST00000616094 L3MBTL2Q969R5 705 aa18.7■□□□□ 0.58
CREB3L1-205ENST00000616094 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
CREB3L1-205ENST00000616094 NUP153P49790 1475 aaKnown RBP18.7■□□□□ 0.58
CREB3L1-205ENST00000616094 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
CREB3L1-205ENST00000616094 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
CREB3L1-205ENST00000616094 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
CREB3L1-205ENST00000616094 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
CREB3L1-205ENST00000616094 ADCY10Q96PN6 1610 aa18.66■□□□□ 0.58
CREB3L1-205ENST00000616094 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
CREB3L1-205ENST00000616094 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
CREB3L1-205ENST00000616094 PZPP20742 1482 aa18.63■□□□□ 0.57
CREB3L1-205ENST00000616094 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
CREB3L1-205ENST00000616094 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
CREB3L1-205ENST00000616094 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 FOXD1Q16676 465 aa18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 ADGRL2O95490 1459 aa18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
CREB3L1-205ENST00000616094 C11orf95C9JLR9 678 aaPredicted RBP18.6■□□□□ 0.57
CREB3L1-205ENST00000616094 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
CREB3L1-205ENST00000616094 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
CREB3L1-205ENST00000616094 KIF14Q15058 1648 aa18.59■□□□□ 0.57
CREB3L1-205ENST00000616094 ARID3CA6NKF2 412 aa18.58■□□□□ 0.57
CREB3L1-205ENST00000616094 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
CREB3L1-205ENST00000616094 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
CREB3L1-205ENST00000616094 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
CREB3L1-205ENST00000616094 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
CREB3L1-205ENST00000616094 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
CREB3L1-205ENST00000616094 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
CREB3L1-205ENST00000616094 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
CREB3L1-205ENST00000616094 KIAA1107Q9UPP5 1409 aa18.53■□□□□ 0.56
CREB3L1-205ENST00000616094 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
CREB3L1-205ENST00000616094 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.56
CREB3L1-205ENST00000616094 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
CREB3L1-205ENST00000616094 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
CREB3L1-205ENST00000616094 KDM5CP41229 1560 aa18.52■□□□□ 0.55
CREB3L1-205ENST00000616094 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
CREB3L1-205ENST00000616094 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
CREB3L1-205ENST00000616094 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
CREB3L1-205ENST00000616094 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
CREB3L1-205ENST00000616094 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
CREB3L1-205ENST00000616094 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
CREB3L1-205ENST00000616094 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
CREB3L1-205ENST00000616094 SHANK2Q9UPX8 1470 aa18.47■□□□□ 0.55
CREB3L1-205ENST00000616094 FAM9BQ8IZU0 186 aa18.47■□□□□ 0.55
CREB3L1-205ENST00000616094 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
CREB3L1-205ENST00000616094 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
CREB3L1-205ENST00000616094 UHRF1BP1Q6BDS2 1440 aa18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 USP47Q96K76 1375 aa18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 ANKRD30AQ9BXX3 1397 aa18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 RALGAPBQ86X10 1494 aa18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
CREB3L1-205ENST00000616094 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
CREB3L1-205ENST00000616094 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
CREB3L1-205ENST00000616094 MSH5O43196 834 aa18.43■□□□□ 0.54
CREB3L1-205ENST00000616094 SMG6Q86US8 1419 aaKnown RBP18.43■□□□□ 0.54
CREB3L1-205ENST00000616094 ABCA8O94911 1581 aa18.41■□□□□ 0.54
CREB3L1-205ENST00000616094 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
CREB3L1-205ENST00000616094 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
CREB3L1-205ENST00000616094 NUP160Q12769 1436 aa18.4■□□□□ 0.54
CREB3L1-205ENST00000616094 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
CREB3L1-205ENST00000616094 E9PCH4 1651 aa18.38■□□□□ 0.53
CREB3L1-205ENST00000616094 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
CREB3L1-205ENST00000616094 PKD2Q13563 968 aa18.37■□□□□ 0.53
CREB3L1-205ENST00000616094 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
CREB3L1-205ENST00000616094 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
CREB3L1-205ENST00000616094 PTPRGP23470 1445 aa18.34■□□□□ 0.53
CREB3L1-205ENST00000616094 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.52
CREB3L1-205ENST00000616094 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
CREB3L1-205ENST00000616094 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
CREB3L1-205ENST00000616094 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
CREB3L1-205ENST00000616094 NUP155O75694 1391 aa18.3■□□□□ 0.52
CREB3L1-205ENST00000616094 ATP10BO94823 1461 aa18.3■□□□□ 0.52
CREB3L1-205ENST00000616094 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
CREB3L1-205ENST00000616094 KIF15Q9NS87 1388 aa18.29■□□□□ 0.52
CREB3L1-205ENST00000616094 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
CREB3L1-205ENST00000616094 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
CREB3L1-205ENST00000616094 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
CREB3L1-205ENST00000616094 TRPM1Q7Z4N2 1603 aa18.26■□□□□ 0.51
CREB3L1-205ENST00000616094 LRPPRCP42704 1394 aaKnown RBP18.26■□□□□ 0.51
CREB3L1-205ENST00000616094 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
CREB3L1-205ENST00000616094 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
CREB3L1-205ENST00000616094 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
CREB3L1-205ENST00000616094 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
CREB3L1-205ENST00000616094 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
CREB3L1-205ENST00000616094 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
CREB3L1-205ENST00000616094 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
CREB3L1-205ENST00000616094 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
CREB3L1-205ENST00000616094 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
CREB3L1-205ENST00000616094 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
CREB3L1-205ENST00000616094 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms