RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GOLGA6L4A6NEF3 574 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 PDS5BQ9NTI5 1447 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 PHLDB1Q86UU1 1377 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 MSNP26038 577 aaKnown RBP5.81□□□□□ -1.48
CHD9-221ENST00000615216 MROH2BQ7Z745 1585 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 GOLGA2Q08379 1002 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 CHMP4AQ9BY43 222 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 SOGA1O94964 1423 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 ANKRD30AQ9BXX3 1397 aa5.81□□□□□ -1.48
CHD9-221ENST00000615216 MORC1Q86VD1 984 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 U2SURPO15042 1029 aaKnown RBP5.8□□□□□ -1.48
CHD9-221ENST00000615216 PRDM2Q13029 1718 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 DCAF11Q8TEB1 546 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 CECR2Q9BXF3 1484 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 NEUROD2Q15784 382 aa5.8□□□□□ -1.48
CHD9-221ENST00000615216 SIN3AQ96ST3 1273 aa5.79□□□□□ -1.48
CHD9-221ENST00000615216 NPHP1O15259 732 aa5.79□□□□□ -1.48
CHD9-221ENST00000615216 HDGFL2Q7Z4V5 671 aaPredicted RBP5.79□□□□□ -1.48
CHD9-221ENST00000615216 CUX1P39880 1505 aa5.79□□□□□ -1.48
CHD9-221ENST00000615216 HTATSF1O43719 755 aaKnown RBP5.79□□□□□ -1.48
CHD9-221ENST00000615216 SYAP1Q96A49 352 aaPredicted RBP5.79□□□□□ -1.48
CHD9-221ENST00000615216 RTF1Q92541 710 aaKnown RBP5.78□□□□□ -1.48
CHD9-221ENST00000615216 RAPGEF2Q9Y4G8 1499 aa5.78□□□□□ -1.48
CHD9-221ENST00000615216 KIAA1211Q6ZU35 1233 aa5.78□□□□□ -1.48
CHD9-221ENST00000615216 GPATCH3Q96I76 525 aa5.78□□□□□ -1.48
CHD9-221ENST00000615216 RAB3GAP2Q9H2M9 1393 aa5.78□□□□□ -1.48
CHD9-221ENST00000615216 SRPK2P78362 688 aaKnown RBP5.78□□□□□ -1.48
CHD9-221ENST00000615216 TCERG1O14776 1098 aaKnown RBP5.78□□□□□ -1.48
CHD9-221ENST00000615216 RWDD1Q9H446 243 aaPredicted RBP5.78□□□□□ -1.48
CHD9-221ENST00000615216 UACAQ9BZF9 1416 aa5.78□□□□□ -1.48
CHD9-221ENST00000615216 DRC7Q8IY82 874 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 HSPA5P11021 654 aaKnown RBP5.77□□□□□ -1.49
CHD9-221ENST00000615216 B4GALNT3Q6L9W6 998 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 NAP1L2Q9ULW6 460 aaPredicted RBP5.77□□□□□ -1.49
CHD9-221ENST00000615216 KIAA2012Q0VF49 1180 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 GNL2Q13823 731 aaKnown RBP5.77□□□□□ -1.49
CHD9-221ENST00000615216 CSPP1Q1MSJ5 1256 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 PLCB2Q00722 1185 aa5.77□□□□□ -1.49
CHD9-221ENST00000615216 SENP3Q9H4L4 574 aaPredicted RBP5.76□□□□□ -1.49
CHD9-221ENST00000615216 TPRNQ4KMQ1 711 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 HDAC5Q9UQL6 1122 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 PLEKHG5O94827 1062 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 RCAN3Q9UKA8 241 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 KIF15Q9NS87 1388 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 TPM4P67936 248 aa5.76□□□□□ -1.49
CHD9-221ENST00000615216 SPAG9O60271 1321 aaKnown RBP5.75□□□□□ -1.49
CHD9-221ENST00000615216 PHF14O94880 888 aa5.75□□□□□ -1.49
CHD9-221ENST00000615216 PDE3BQ13370 1112 aa5.75□□□□□ -1.49
CHD9-221ENST00000615216 PKD2Q13563 968 aa5.75□□□□□ -1.49
CHD9-221ENST00000615216 LMOD2Q6P5Q4 547 aa5.75□□□□□ -1.49
CHD9-221ENST00000615216 DEKP35659 375 aaKnown RBP5.75□□□□□ -1.49
CHD9-221ENST00000615216 NUP155O75694 1391 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 LMOD3Q0VAK6 560 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 RSPH4AQ5TD94 716 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 CCDC34Q96HJ3 373 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 USP35Q9P2H5 1018 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 HMMRO75330 724 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 ITPRIPQ8IWB1 547 aa5.74□□□□□ -1.49
CHD9-221ENST00000615216 MPHOSPH9Q99550 1183 aa5.73□□□□□ -1.49
CHD9-221ENST00000615216 RBM19Q9Y4C8 960 aaKnown RBP5.73□□□□□ -1.49
CHD9-221ENST00000615216 TERF2IPQ9NYB0 399 aa5.73□□□□□ -1.49
CHD9-221ENST00000615216 KIF21BO75037 1637 aa5.73□□□□□ -1.49
CHD9-221ENST00000615216 TULP1O00294 542 aaPredicted RBP5.72□□□□□ -1.49
CHD9-221ENST00000615216 STK31Q9BXU1 1019 aa5.72□□□□□ -1.49
CHD9-221ENST00000615216 EFCAB2Q5VUJ9 269 aa5.71□□□□□ -1.49
CHD9-221ENST00000615216 SENP3-EIF4A1A0A087X0R7 540 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 CCDC144AA2RUR9 1427 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 DDX11L8A8MPP1 907 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 U2AF1L5P0DN76 240 aaPredicted RBP5.71□□□□□ -1.5
CHD9-221ENST00000615216 U2AF1Q01081 240 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD9-221ENST00000615216 NLRP13Q86W25 1043 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 CHMP4CQ96CF2 233 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 RTN4Q9NQC3 1192 aaKnown RBP5.71□□□□□ -1.5
CHD9-221ENST00000615216 GOLGA6L3A6NEY3 463 aa5.71□□□□□ -1.5
CHD9-221ENST00000615216 CENPJQ9HC77 1338 aaPredicted RBP5.71□□□□□ -1.5
CHD9-221ENST00000615216 FHOD3Q2V2M9 1422 aa5.7□□□□□ -1.5
CHD9-221ENST00000615216 IPO9Q96P70 1041 aaKnown RBP5.7□□□□□ -1.5
CHD9-221ENST00000615216 MYBBP1AQ9BQG0 1328 aaKnown RBP5.7□□□□□ -1.5
CHD9-221ENST00000615216 CLSTN1O94985 981 aa5.7□□□□□ -1.5
CHD9-221ENST00000615216 NOC3LQ8WTT2 800 aaKnown RBP5.7□□□□□ -1.5
CHD9-221ENST00000615216 KIF3AQ9Y496 699 aa5.7□□□□□ -1.5
CHD9-221ENST00000615216 ST18O60284 1047 aa5.7□□□□□ -1.5
CHD9-221ENST00000615216 TAOK2Q9UL54 1235 aa5.7□□□□□ -1.5
CHD9-221ENST00000615216 SPRYD3Q8NCJ5 442 aa5.69□□□□□ -1.5
CHD9-221ENST00000615216 SMC4Q9NTJ3 1288 aa5.69□□□□□ -1.5
CHD9-221ENST00000615216 GOLGA6L1Q8N7Z2 621 aa5.69□□□□□ -1.5
CHD9-221ENST00000615216 KANK4Q5T7N3 995 aaPredicted RBP5.69□□□□□ -1.5
CHD9-221ENST00000615216 TMX4Q9H1E5 349 aaPredicted RBP5.69□□□□□ -1.5
CHD9-221ENST00000615216 HSP90B1P14625 803 aaKnown RBP5.69□□□□□ -1.5
CHD9-221ENST00000615216 SUPT6HQ7KZ85 1726 aaKnown RBP5.68□□□□□ -1.5
CHD9-221ENST00000615216 CENPQQ7L2Z9 268 aaPredicted RBP5.68□□□□□ -1.5
CHD9-221ENST00000615216 STK26Q9P289 416 aa5.68□□□□□ -1.5
CHD9-221ENST00000615216 ROCK1Q13464 1354 aa5.68□□□□□ -1.5
CHD9-221ENST00000615216 KIF16BQ96L93 1317 aa5.68□□□□□ -1.5
CHD9-221ENST00000615216 CADPSQ9ULU8 1353 aa5.67□□□□□ -1.5
CHD9-221ENST00000615216 SAFB2Q14151 953 aaKnown RBP eCLIP5.67□□□□□ -1.5
CHD9-221ENST00000615216 SKOR2Q2VWA4 1001 aaPredicted RBP5.67□□□□□ -1.5
CHD9-221ENST00000615216 EID1Q9Y6B2 187 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms