RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 MIA2Q96PC5 1412 aa26.44■■□□□ 1.82
GEN1-208ENST00000614478 TTC37Q6PGP7 1564 aa26.43■■□□□ 1.82
GEN1-208ENST00000614478 TSPOAP1O95153 1857 aa26.42■■□□□ 1.82
GEN1-208ENST00000614478 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
GEN1-208ENST00000614478 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
GEN1-208ENST00000614478 CD109Q6YHK3 1445 aa26.38■■□□□ 1.81
GEN1-208ENST00000614478 PPRC1Q5VV67 1664 aaKnown RBP26.36■■□□□ 1.81
GEN1-208ENST00000614478 SETD5Q9C0A6 1442 aa26.34■■□□□ 1.81
GEN1-208ENST00000614478 PTPRKQ15262 1439 aa26.33■■□□□ 1.81
GEN1-208ENST00000614478 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
GEN1-208ENST00000614478 GPATCH8Q9UKJ3 1502 aaKnown RBP26.33■■□□□ 1.81
GEN1-208ENST00000614478 ITSN2Q9NZM3 1697 aa26.32■■□□□ 1.8
GEN1-208ENST00000614478 RAB3GAP2Q9H2M9 1393 aa26.31■■□□□ 1.8
GEN1-208ENST00000614478 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
GEN1-208ENST00000614478 PREX2Q70Z35 1606 aa26.3■■□□□ 1.8
GEN1-208ENST00000614478 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
GEN1-208ENST00000614478 CDC42BPBQ9Y5S2 1711 aa26.29■■□□□ 1.8
GEN1-208ENST00000614478 PLCH2O75038 1416 aa26.29■■□□□ 1.8
GEN1-208ENST00000614478 CFDP1Q9UEE9 299 aaPredicted RBP26.29■■□□□ 1.8
GEN1-208ENST00000614478 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
GEN1-208ENST00000614478 DHX57Q6P158 1386 aaKnown RBP26.25■■□□□ 1.79
GEN1-208ENST00000614478 CFAP74Q9C0B2 1584 aa26.25■■□□□ 1.79
GEN1-208ENST00000614478 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
GEN1-208ENST00000614478 FANCAO15360 1455 aa26.22■■□□□ 1.79
GEN1-208ENST00000614478 CAMSAP2Q08AD1 1489 aa26.2■■□□□ 1.79
GEN1-208ENST00000614478 NEO1Q92859 1461 aa26.2■■□□□ 1.79
GEN1-208ENST00000614478 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
GEN1-208ENST00000614478 ZNF777Q9ULD5 760 aaPredicted RBP26.19■■□□□ 1.78
GEN1-208ENST00000614478 DAPK1P53355 1430 aa26.18■■□□□ 1.78
GEN1-208ENST00000614478 DNMT1P26358 1616 aaKnown RBP26.18■■□□□ 1.78
GEN1-208ENST00000614478 EFCAB2Q5VUJ9 269 aa26.17■■□□□ 1.78
GEN1-208ENST00000614478 CHIC2Q9UKJ5 165 aa26.17■■□□□ 1.78
GEN1-208ENST00000614478 ABCC5O15440 1437 aa26.16■■□□□ 1.78
GEN1-208ENST00000614478 NAIPQ13075 1403 aa26.15■■□□□ 1.78
GEN1-208ENST00000614478 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
GEN1-208ENST00000614478 AKNAQ7Z591 1439 aa26.13■■□□□ 1.77
GEN1-208ENST00000614478 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
GEN1-208ENST00000614478 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
GEN1-208ENST00000614478 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
GEN1-208ENST00000614478 KDM6BO15054 1643 aa26.08■■□□□ 1.77
GEN1-208ENST00000614478 GCC2Q8IWJ2 1684 aa26.07■■□□□ 1.76
GEN1-208ENST00000614478 ABCC1P33527 1531 aa26.07■■□□□ 1.76
GEN1-208ENST00000614478 ROCK1Q13464 1354 aa26.07■■□□□ 1.76
GEN1-208ENST00000614478 PLEKHH2Q8IVE3 1493 aa26.06■■□□□ 1.76
GEN1-208ENST00000614478 SCAPERQ9BY12 1400 aa26.02■■□□□ 1.76
GEN1-208ENST00000614478 CROCC2H7BZ55 1655 aa26.02■■□□□ 1.76
GEN1-208ENST00000614478 KIAA1107Q9UPP5 1409 aa26.02■■□□□ 1.76
GEN1-208ENST00000614478 COL17A1Q9UMD9 1497 aaPredicted RBP26.02■■□□□ 1.76
GEN1-208ENST00000614478 RICTORQ6R327 1708 aa26.02■■□□□ 1.76
GEN1-208ENST00000614478 SYCP2Q9BX26 1530 aa26■■□□□ 1.75
GEN1-208ENST00000614478 DENND4BO75064 1496 aaPredicted RBP26■■□□□ 1.75
GEN1-208ENST00000614478 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
GEN1-208ENST00000614478 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
GEN1-208ENST00000614478 ADGBQ8N7X0 1667 aa25.97■■□□□ 1.75
GEN1-208ENST00000614478 MBD5Q9P267 1494 aa25.97■■□□□ 1.75
GEN1-208ENST00000614478 POGZQ7Z3K3 1410 aa25.97■■□□□ 1.75
GEN1-208ENST00000614478 ARHGEF5Q12774 1597 aa25.97■■□□□ 1.75
GEN1-208ENST00000614478 FRMPD1Q5SYB0 1578 aa25.96■■□□□ 1.75
GEN1-208ENST00000614478 ZNF518AQ6AHZ1 1483 aa25.96■■□□□ 1.75
GEN1-208ENST00000614478 ADGRL2O95490 1459 aa25.95■■□□□ 1.74
GEN1-208ENST00000614478 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
GEN1-208ENST00000614478 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
GEN1-208ENST00000614478 TSPY4P0CV99 314 aa25.93■■□□□ 1.74
GEN1-208ENST00000614478 TSPY10P0CW01 314 aa25.93■■□□□ 1.74
GEN1-208ENST00000614478 KDM5CP41229 1560 aa25.92■■□□□ 1.74
GEN1-208ENST00000614478 RAPGEF3O95398 923 aa25.92■■□□□ 1.74
GEN1-208ENST00000614478 RSPH4AQ5TD94 716 aa25.92■■□□□ 1.74
GEN1-208ENST00000614478 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
GEN1-208ENST00000614478 ANKRD30AQ9BXX3 1397 aa25.92■■□□□ 1.74
GEN1-208ENST00000614478 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
GEN1-208ENST00000614478 CCDC141Q6ZP82 1450 aa25.9■■□□□ 1.74
GEN1-208ENST00000614478 ZMYM4Q5VZL5 1548 aa25.9■■□□□ 1.74
GEN1-208ENST00000614478 AFAP1Q8N556 730 aa25.87■■□□□ 1.73
GEN1-208ENST00000614478 TRIM52Q96A61 297 aa25.87■■□□□ 1.73
GEN1-208ENST00000614478 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
GEN1-208ENST00000614478 HECW2Q9P2P5 1572 aa25.85■■□□□ 1.73
GEN1-208ENST00000614478 MAGI2Q86UL8 1455 aa25.83■■□□□ 1.73
GEN1-208ENST00000614478 MLH3Q9UHC1 1453 aa25.82■■□□□ 1.72
GEN1-208ENST00000614478 INO80Q9ULG1 1556 aaPredicted RBP25.81■■□□□ 1.72
GEN1-208ENST00000614478 KIDINS220Q9ULH0 1771 aa25.8■■□□□ 1.72
GEN1-208ENST00000614478 SIN3AQ96ST3 1273 aa25.79■■□□□ 1.72
GEN1-208ENST00000614478 SPAG9O60271 1321 aaKnown RBP25.79■■□□□ 1.72
GEN1-208ENST00000614478 ANKRD50Q9ULJ7 1429 aa25.78■■□□□ 1.72
GEN1-208ENST00000614478 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
GEN1-208ENST00000614478 ATP7AQ04656 1500 aa25.78■■□□□ 1.72
GEN1-208ENST00000614478 ZFYVE16Q7Z3T8 1539 aa25.78■■□□□ 1.72
GEN1-208ENST00000614478 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
GEN1-208ENST00000614478 RTEL1-TNFRSF6BF6WH68 1400 aa25.77■■□□□ 1.72
GEN1-208ENST00000614478 ARHGEF40Q8TER5 1519 aa25.77■■□□□ 1.72
GEN1-208ENST00000614478 MPHOSPH9Q99550 1183 aa25.76■■□□□ 1.71
GEN1-208ENST00000614478 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
GEN1-208ENST00000614478 MYT1LQ9UL68 1186 aa25.74■■□□□ 1.71
GEN1-208ENST00000614478 YEATS2Q9ULM3 1422 aa25.73■■□□□ 1.71
GEN1-208ENST00000614478 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
GEN1-208ENST00000614478 DIP2CQ9Y2E4 1556 aa25.71■■□□□ 1.71
GEN1-208ENST00000614478 PLXNC1O60486 1568 aa25.7■■□□□ 1.7
GEN1-208ENST00000614478 ATP10AO60312 1499 aa25.66■■□□□ 1.7
GEN1-208ENST00000614478 SLC4A1APQ9BWU0 796 aaKnown RBP25.66■■□□□ 1.7
GEN1-208ENST00000614478 TIMELESSQ9UNS1 1208 aa25.66■■□□□ 1.7
GEN1-208ENST00000614478 REREQ9P2R6 1566 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms