RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-223ENST00000614293 FOXD1Q16676 465 aa15.45■□□□□ 0.06
ABCA2-223ENST00000614293 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
ABCA2-223ENST00000614293 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
ABCA2-223ENST00000614293 MLECQ14165 292 aa15.43■□□□□ 0.06
ABCA2-223ENST00000614293 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
ABCA2-223ENST00000614293 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
ABCA2-223ENST00000614293 CTDP1Q9Y5B0 961 aaPredicted RBP15.43■□□□□ 0.06
ABCA2-223ENST00000614293 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
ABCA2-223ENST00000614293 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
ABCA2-223ENST00000614293 TRIM34Q9BYJ4 488 aa15.41■□□□□ 0.06
ABCA2-223ENST00000614293 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
ABCA2-223ENST00000614293 IRX6P78412 446 aaPredicted RBP15.41■□□□□ 0.06
ABCA2-223ENST00000614293 NEUROD2Q15784 382 aa15.41■□□□□ 0.06
ABCA2-223ENST00000614293 CARD11Q9BXL7 1154 aa15.4■□□□□ 0.06
ABCA2-223ENST00000614293 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
ABCA2-223ENST00000614293 HSCBQ8IWL3 235 aa15.4■□□□□ 0.06
ABCA2-223ENST00000614293 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
ABCA2-223ENST00000614293 SPAG9O60271 1321 aaKnown RBP15.39■□□□□ 0.05
ABCA2-223ENST00000614293 RASSF8Q8NHQ8 419 aa15.39■□□□□ 0.05
ABCA2-223ENST00000614293 MARCH6O60337 910 aa15.39■□□□□ 0.05
ABCA2-223ENST00000614293 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
ABCA2-223ENST00000614293 PTMSP20962 102 aa15.38■□□□□ 0.05
ABCA2-223ENST00000614293 SOX12O15370 315 aa15.38■□□□□ 0.05
ABCA2-223ENST00000614293 EID1Q9Y6B2 187 aa15.38■□□□□ 0.05
ABCA2-223ENST00000614293 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
ABCA2-223ENST00000614293 GOLGA6L1Q8N7Z2 621 aa15.37■□□□□ 0.05
ABCA2-223ENST00000614293 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
ABCA2-223ENST00000614293 CHMP3Q9Y3E7 222 aa15.36■□□□□ 0.05
ABCA2-223ENST00000614293 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
ABCA2-223ENST00000614293 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
ABCA2-223ENST00000614293 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
ABCA2-223ENST00000614293 MSNP26038 577 aaKnown RBP15.35■□□□□ 0.05
ABCA2-223ENST00000614293 CEP162Q5TB80 1403 aa15.35■□□□□ 0.05
ABCA2-223ENST00000614293 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
ABCA2-223ENST00000614293 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
ABCA2-223ENST00000614293 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
ABCA2-223ENST00000614293 TMF1P82094 1093 aa15.34■□□□□ 0.05
ABCA2-223ENST00000614293 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
ABCA2-223ENST00000614293 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
ABCA2-223ENST00000614293 MSH5O43196 834 aa15.31■□□□□ 0.04
ABCA2-223ENST00000614293 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
ABCA2-223ENST00000614293 NOP58Q9Y2X3 529 aaKnown RBP15.29■□□□□ 0.04
ABCA2-223ENST00000614293 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
ABCA2-223ENST00000614293 TPM2P07951 284 aa15.29■□□□□ 0.04
ABCA2-223ENST00000614293 EVA1CP58658 441 aa15.28■□□□□ 0.04
ABCA2-223ENST00000614293 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
ABCA2-223ENST00000614293 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
ABCA2-223ENST00000614293 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
ABCA2-223ENST00000614293 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
ABCA2-223ENST00000614293 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
ABCA2-223ENST00000614293 PDE4CQ08493 712 aa15.27■□□□□ 0.04
ABCA2-223ENST00000614293 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
ABCA2-223ENST00000614293 TSR1Q2NL82 804 aaKnown RBP15.27■□□□□ 0.03
ABCA2-223ENST00000614293 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
ABCA2-223ENST00000614293 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
ABCA2-223ENST00000614293 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
ABCA2-223ENST00000614293 TPM3P06753 285 aa15.25■□□□□ 0.03
ABCA2-223ENST00000614293 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
ABCA2-223ENST00000614293 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
ABCA2-223ENST00000614293 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
ABCA2-223ENST00000614293 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
ABCA2-223ENST00000614293 AKAP17AQ02040 695 aaKnown RBP15.22■□□□□ 0.03
ABCA2-223ENST00000614293 CC2D1BQ5T0F9 858 aaKnown RBP15.21■□□□□ 0.03
ABCA2-223ENST00000614293 RGS3P49796 1198 aa15.2■□□□□ 0.02
ABCA2-223ENST00000614293 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-223ENST00000614293 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
ABCA2-223ENST00000614293 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
ABCA2-223ENST00000614293 WWC2Q6AWC2 1192 aa15.2■□□□□ 0.02
ABCA2-223ENST00000614293 CCDC43Q96MW1 224 aaKnown RBP15.2■□□□□ 0.02
ABCA2-223ENST00000614293 HMMRO75330 724 aa15.19■□□□□ 0.02
ABCA2-223ENST00000614293 CREBRFQ8IUR6 639 aa15.19■□□□□ 0.02
ABCA2-223ENST00000614293 MIER1Q8N108 512 aa15.19■□□□□ 0.02
ABCA2-223ENST00000614293 STK26Q9P289 416 aa15.19■□□□□ 0.02
ABCA2-223ENST00000614293 DEKP35659 375 aaKnown RBP15.18■□□□□ 0.02
ABCA2-223ENST00000614293 CCDC70Q6NSX1 233 aa15.18■□□□□ 0.02
ABCA2-223ENST00000614293 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
ABCA2-223ENST00000614293 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
ABCA2-223ENST00000614293 TOMM22Q9NS69 142 aa15.17■□□□□ 0.02
ABCA2-223ENST00000614293 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
ABCA2-223ENST00000614293 R3HCC1Q9Y3T6 440 aaKnown RBP15.17■□□□□ 0.02
ABCA2-223ENST00000614293 NGDNQ8NEJ9 315 aaKnown RBP15.17■□□□□ 0.02
ABCA2-223ENST00000614293 TPM1P09493 284 aa15.16■□□□□ 0.02
ABCA2-223ENST00000614293 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
ABCA2-223ENST00000614293 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
ABCA2-223ENST00000614293 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
ABCA2-223ENST00000614293 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
ABCA2-223ENST00000614293 GGT6Q6P531 493 aa15.15■□□□□ 0.02
ABCA2-223ENST00000614293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.023e-6■■■■■ 143.4
ABCA2-223ENST00000614293 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
ABCA2-223ENST00000614293 PHF14O94880 888 aa15.15■□□□□ 0.02
ABCA2-223ENST00000614293 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
ABCA2-223ENST00000614293 ARID3AQ99856 593 aa15.15■□□□□ 0.02
ABCA2-223ENST00000614293 SYNE3Q6ZMZ3 975 aa15.14■□□□□ 0.01
ABCA2-223ENST00000614293 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
ABCA2-223ENST00000614293 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
ABCA2-223ENST00000614293 AMPHP49418 695 aa15.14■□□□□ 0.01
ABCA2-223ENST00000614293 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
ABCA2-223ENST00000614293 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
ABCA2-223ENST00000614293 PES1O00541 588 aaKnown RBP15.13■□□□□ 0.01
ABCA2-223ENST00000614293 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms