RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 HMMRO75330 724 aa10.52□□□□□ -0.72
ALMS1-206ENST00000613296 SOX12O15370 315 aa10.52□□□□□ -0.73
ALMS1-206ENST00000613296 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
ALMS1-206ENST00000613296 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
ALMS1-206ENST00000613296 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
ALMS1-206ENST00000613296 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
ALMS1-206ENST00000613296 TEX35Q5T0J7 233 aa10.52□□□□□ -0.73
ALMS1-206ENST00000613296 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
ALMS1-206ENST00000613296 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
ALMS1-206ENST00000613296 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
ALMS1-206ENST00000613296 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
ALMS1-206ENST00000613296 MAP7D2Q96T17 732 aa10.5□□□□□ -0.73
ALMS1-206ENST00000613296 CSPP1Q1MSJ5 1256 aa10.5□□□□□ -0.73
ALMS1-206ENST00000613296 ABCC9O60706 1549 aa10.49□□□□□ -0.73
ALMS1-206ENST00000613296 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
ALMS1-206ENST00000613296 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
ALMS1-206ENST00000613296 APBB1O00213 710 aa10.47□□□□□ -0.73
ALMS1-206ENST00000613296 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
ALMS1-206ENST00000613296 TPM1P09493 284 aa10.47□□□□□ -0.73
ALMS1-206ENST00000613296 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.73
ALMS1-206ENST00000613296 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
ALMS1-206ENST00000613296 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.73
ALMS1-206ENST00000613296 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
ALMS1-206ENST00000613296 GPATCH3Q96I76 525 aa10.46□□□□□ -0.74
ALMS1-206ENST00000613296 TPM2P07951 284 aa10.45□□□□□ -0.74
ALMS1-206ENST00000613296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.74
ALMS1-206ENST00000613296 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
ALMS1-206ENST00000613296 RUFY1Q96T51 708 aa10.44□□□□□ -0.74
ALMS1-206ENST00000613296 U2SURPO15042 1029 aaKnown RBP10.44□□□□□ -0.74
ALMS1-206ENST00000613296 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
ALMS1-206ENST00000613296 AK7Q96M32 723 aa10.44□□□□□ -0.74
ALMS1-206ENST00000613296 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
ALMS1-206ENST00000613296 TMX4Q9H1E5 349 aaPredicted RBP10.44□□□□□ -0.74
ALMS1-206ENST00000613296 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
ALMS1-206ENST00000613296 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
ALMS1-206ENST00000613296 IPO7O95373 1038 aaKnown RBP10.43□□□□□ -0.74
ALMS1-206ENST00000613296 CDR1P51861 262 aa10.43□□□□□ -0.74
ALMS1-206ENST00000613296 RGL3Q3MIN7 710 aa10.43□□□□□ -0.74
ALMS1-206ENST00000613296 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
ALMS1-206ENST00000613296 MARCH6O60337 910 aa10.42□□□□□ -0.74
ALMS1-206ENST00000613296 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
ALMS1-206ENST00000613296 H0YHG0 523 aa10.42□□□□□ -0.74
ALMS1-206ENST00000613296 ZNF592Q92610 1267 aa10.42□□□□□ -0.74
ALMS1-206ENST00000613296 MTUS2Q5JR59 1369 aa10.42□□□□□ -0.74
ALMS1-206ENST00000613296 RDXP35241 583 aaKnown RBP10.41□□□□□ -0.74
ALMS1-206ENST00000613296 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
ALMS1-206ENST00000613296 PLCD4Q9BRC7 762 aa10.41□□□□□ -0.74
ALMS1-206ENST00000613296 GORABQ5T7V8 394 aa10.41□□□□□ -0.74
ALMS1-206ENST00000613296 NOL8Q76FK4 1167 aaKnown RBP10.41□□□□□ -0.74
ALMS1-206ENST00000613296 POGKQ9P215 609 aa10.4□□□□□ -0.74
ALMS1-206ENST00000613296 KIF3AQ9Y496 699 aa10.4□□□□□ -0.74
ALMS1-206ENST00000613296 CWC15Q9P013 229 aaKnown RBP10.39□□□□□ -0.75
ALMS1-206ENST00000613296 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
ALMS1-206ENST00000613296 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
ALMS1-206ENST00000613296 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
ALMS1-206ENST00000613296 HSP90B2PQ58FF3 399 aa10.38□□□□□ -0.75
ALMS1-206ENST00000613296 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
ALMS1-206ENST00000613296 ITPRIPQ8IWB1 547 aa10.38□□□□□ -0.75
ALMS1-206ENST00000613296 MFAP1P55081 439 aaKnown RBP10.38□□□□□ -0.75
ALMS1-206ENST00000613296 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
ALMS1-206ENST00000613296 DCAF1Q9Y4B6 1507 aa10.37□□□□□ -0.75
ALMS1-206ENST00000613296 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
ALMS1-206ENST00000613296 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
ALMS1-206ENST00000613296 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
ALMS1-206ENST00000613296 HSP90AB3PQ58FF7 597 aa10.37□□□□□ -0.75
ALMS1-206ENST00000613296 TCERG1O14776 1098 aaKnown RBP10.37□□□□□ -0.75
ALMS1-206ENST00000613296 RRP7BPQ9NSQ0 103 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 BECN2A8MW95 431 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 CT47A1Q5JQC4 288 aaPredicted RBP10.36□□□□□ -0.75
ALMS1-206ENST00000613296 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
ALMS1-206ENST00000613296 ANKRD20A12PQ8NF67 263 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 CARD11Q9BXL7 1154 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 H3BQV1 296 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 IPO8O15397 1037 aaKnown RBP10.36□□□□□ -0.75
ALMS1-206ENST00000613296 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
ALMS1-206ENST00000613296 FOXD4L5Q5VV16 416 aaPredicted RBP10.35□□□□□ -0.75
ALMS1-206ENST00000613296 FOXD4L4Q8WXT5 416 aaPredicted RBP10.35□□□□□ -0.75
ALMS1-206ENST00000613296 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
ALMS1-206ENST00000613296 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
ALMS1-206ENST00000613296 MLECQ14165 292 aa10.35□□□□□ -0.75
ALMS1-206ENST00000613296 HOMER1Q86YM7 354 aa10.35□□□□□ -0.75
ALMS1-206ENST00000613296 ARGLU1Q9NWB6 273 aaPredicted RBP10.35□□□□□ -0.75
ALMS1-206ENST00000613296 ST18O60284 1047 aa10.35□□□□□ -0.75
ALMS1-206ENST00000613296 ZRSR2Q15696 482 aaKnown RBP10.34□□□□□ -0.75
ALMS1-206ENST00000613296 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
ALMS1-206ENST00000613296 G3V3G9 751 aa10.34□□□□□ -0.75
ALMS1-206ENST00000613296 SAFB2Q14151 953 aaKnown RBP eCLIP10.34□□□□□ -0.75
ALMS1-206ENST00000613296 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
ALMS1-206ENST00000613296 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
ALMS1-206ENST00000613296 ODF2Q5BJF6 829 aa10.34□□□□□ -0.75
ALMS1-206ENST00000613296 NAP1L1P55209 391 aaKnown RBP10.33□□□□□ -0.76
ALMS1-206ENST00000613296 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
ALMS1-206ENST00000613296 RBM19Q9Y4C8 960 aaKnown RBP10.33□□□□□ -0.76
ALMS1-206ENST00000613296 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
ALMS1-206ENST00000613296 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
ALMS1-206ENST00000613296 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
ALMS1-206ENST00000613296 NEXNQ0ZGT2 675 aa10.32□□□□□ -0.76
ALMS1-206ENST00000613296 DYDC1Q8WWB3 177 aa10.32□□□□□ -0.76
ALMS1-206ENST00000613296 INCENPQ9NQS7 918 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms