RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 ABCC2Q92887 1545 aa26.1■■□□□ 1.77
SEMA6C-209ENST00000613223 ZNF644Q9H582 1327 aaPredicted RBP26.1■■□□□ 1.77
SEMA6C-209ENST00000613223 RRP7BPQ9NSQ0 103 aa26.09■■□□□ 1.77
SEMA6C-209ENST00000613223 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.77
SEMA6C-209ENST00000613223 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
SEMA6C-209ENST00000613223 KDM6BO15054 1643 aa26.01■■□□□ 1.75
SEMA6C-209ENST00000613223 CROCC2H7BZ55 1655 aa26.01■■□□□ 1.75
SEMA6C-209ENST00000613223 TIMELESSQ9UNS1 1208 aa26■■□□□ 1.75
SEMA6C-209ENST00000613223 UHRF1BP1LA0JNW5 1464 aa25.99■■□□□ 1.75
SEMA6C-209ENST00000613223 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
SEMA6C-209ENST00000613223 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
SEMA6C-209ENST00000613223 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
SEMA6C-209ENST00000613223 ZNF777Q9ULD5 760 aaPredicted RBP25.96■■□□□ 1.75
SEMA6C-209ENST00000613223 ADGRL2O95490 1459 aa25.95■■□□□ 1.74
SEMA6C-209ENST00000613223 PREX2Q70Z35 1606 aa25.94■■□□□ 1.74
SEMA6C-209ENST00000613223 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
SEMA6C-209ENST00000613223 SHANK2Q9UPX8 1470 aa25.92■■□□□ 1.74
SEMA6C-209ENST00000613223 ZCCHC11Q5TAX3 1644 aaKnown RBP25.91■■□□□ 1.74
SEMA6C-209ENST00000613223 NCOA1Q15788 1441 aa25.91■■□□□ 1.74
SEMA6C-209ENST00000613223 KDM5BQ9UGL1 1544 aa25.9■■□□□ 1.74
SEMA6C-209ENST00000613223 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
SEMA6C-209ENST00000613223 TRIM52Q96A61 297 aa25.89■■□□□ 1.73
SEMA6C-209ENST00000613223 CDC42BPBQ9Y5S2 1711 aa25.89■■□□□ 1.73
SEMA6C-209ENST00000613223 TTC37Q6PGP7 1564 aa25.88■■□□□ 1.73
SEMA6C-209ENST00000613223 DENND4BO75064 1496 aaPredicted RBP25.88■■□□□ 1.73
SEMA6C-209ENST00000613223 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
SEMA6C-209ENST00000613223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.87■■□□□ 1.73
SEMA6C-209ENST00000613223 ANKRD30AQ9BXX3 1397 aa25.85■■□□□ 1.73
SEMA6C-209ENST00000613223 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
SEMA6C-209ENST00000613223 C9orf84Q5VXU9 1444 aa25.82■■□□□ 1.72
SEMA6C-209ENST00000613223 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
SEMA6C-209ENST00000613223 MPHOSPH9Q99550 1183 aa25.82■■□□□ 1.72
SEMA6C-209ENST00000613223 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
SEMA6C-209ENST00000613223 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
SEMA6C-209ENST00000613223 ARHGAP5Q13017 1502 aa25.79■■□□□ 1.72
SEMA6C-209ENST00000613223 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
SEMA6C-209ENST00000613223 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
SEMA6C-209ENST00000613223 CCDC141Q6ZP82 1450 aa25.78■■□□□ 1.72
SEMA6C-209ENST00000613223 TSPY4P0CV99 314 aa25.75■■□□□ 1.71
SEMA6C-209ENST00000613223 TSPY10P0CW01 314 aa25.75■■□□□ 1.71
SEMA6C-209ENST00000613223 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
SEMA6C-209ENST00000613223 RSPH4AQ5TD94 716 aa25.75■■□□□ 1.71
SEMA6C-209ENST00000613223 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.71
SEMA6C-209ENST00000613223 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
SEMA6C-209ENST00000613223 PLEKHH2Q8IVE3 1493 aa25.73■■□□□ 1.71
SEMA6C-209ENST00000613223 SYCP2Q9BX26 1530 aa25.72■■□□□ 1.71
SEMA6C-209ENST00000613223 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
SEMA6C-209ENST00000613223 PZPP20742 1482 aa25.71■■□□□ 1.71
SEMA6C-209ENST00000613223 PLCH2O75038 1416 aa25.7■■□□□ 1.7
SEMA6C-209ENST00000613223 KIAA1107Q9UPP5 1409 aa25.7■■□□□ 1.7
SEMA6C-209ENST00000613223 MAST1Q9Y2H9 1570 aa25.69■■□□□ 1.7
SEMA6C-209ENST00000613223 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
SEMA6C-209ENST00000613223 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
SEMA6C-209ENST00000613223 KIF15Q9NS87 1388 aa25.67■■□□□ 1.7
SEMA6C-209ENST00000613223 WDR7Q9Y4E6 1490 aa25.66■■□□□ 1.7
SEMA6C-209ENST00000613223 ARAP3Q8WWN8 1544 aa25.64■■□□□ 1.69
SEMA6C-209ENST00000613223 FOXD1Q16676 465 aa25.62■■□□□ 1.69
SEMA6C-209ENST00000613223 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
SEMA6C-209ENST00000613223 RPRD2Q5VT52 1461 aaKnown RBP25.61■■□□□ 1.69
SEMA6C-209ENST00000613223 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
SEMA6C-209ENST00000613223 ABCC1P33527 1531 aa25.59■■□□□ 1.69
SEMA6C-209ENST00000613223 PLXNC1O60486 1568 aa25.59■■□□□ 1.69
SEMA6C-209ENST00000613223 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.69
SEMA6C-209ENST00000613223 MIER1Q8N108 512 aa25.57■■□□□ 1.68
SEMA6C-209ENST00000613223 ABCA9Q8IUA7 1624 aa25.55■■□□□ 1.68
SEMA6C-209ENST00000613223 NUP155O75694 1391 aa25.54■■□□□ 1.68
SEMA6C-209ENST00000613223 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
SEMA6C-209ENST00000613223 ASXL2Q76L83 1435 aa25.52■■□□□ 1.68
SEMA6C-209ENST00000613223 TEX14Q8IWB6 1497 aa25.51■■□□□ 1.67
SEMA6C-209ENST00000613223 PKD2Q13563 968 aa25.5■■□□□ 1.67
SEMA6C-209ENST00000613223 L3MBTL2Q969R5 705 aa25.49■■□□□ 1.67
SEMA6C-209ENST00000613223 UNC13BO14795 1591 aa25.47■■□□□ 1.67
SEMA6C-209ENST00000613223 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
SEMA6C-209ENST00000613223 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
SEMA6C-209ENST00000613223 FANCAO15360 1455 aa25.44■■□□□ 1.66
SEMA6C-209ENST00000613223 NPM1P06748 294 aaKnown RBP eCLIP25.44■■□□□ 1.66
SEMA6C-209ENST00000613223 FAM135AQ9P2D6 1515 aa25.43■■□□□ 1.66
SEMA6C-209ENST00000613223 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
SEMA6C-209ENST00000613223 RTEL1-TNFRSF6BF6WH68 1400 aa25.4■■□□□ 1.66
SEMA6C-209ENST00000613223 ZFYVE16Q7Z3T8 1539 aa25.38■■□□□ 1.65
SEMA6C-209ENST00000613223 MAGI2Q86UL8 1455 aa25.37■■□□□ 1.65
SEMA6C-209ENST00000613223 IQGAP3Q86VI3 1631 aa25.37■■□□□ 1.65
SEMA6C-209ENST00000613223 SPAG9O60271 1321 aaKnown RBP25.36■■□□□ 1.65
SEMA6C-209ENST00000613223 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
SEMA6C-209ENST00000613223 ADGRL1O94910 1474 aa25.35■■□□□ 1.65
SEMA6C-209ENST00000613223 INO80Q9ULG1 1556 aaPredicted RBP25.33■■□□□ 1.64
SEMA6C-209ENST00000613223 AFAP1Q8N556 730 aa25.31■■□□□ 1.64
SEMA6C-209ENST00000613223 DDX10Q13206 875 aaKnown RBP25.3■■□□□ 1.64
SEMA6C-209ENST00000613223 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
SEMA6C-209ENST00000613223 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
SEMA6C-209ENST00000613223 SCAPERQ9BY12 1400 aa25.29■■□□□ 1.64
SEMA6C-209ENST00000613223 CFAP74Q9C0B2 1584 aa25.28■■□□□ 1.64
SEMA6C-209ENST00000613223 EIF4G2P78344 907 aaKnown RBP eCLIP25.27■■□□□ 1.64
SEMA6C-209ENST00000613223 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
SEMA6C-209ENST00000613223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.637e-6■□□□□ 10.8
SEMA6C-209ENST00000613223 YTHDC1Q96MU7 727 aaKnown RBP25.25■■□□□ 1.63
SEMA6C-209ENST00000613223 CD109Q6YHK3 1445 aa25.24■■□□□ 1.63
SEMA6C-209ENST00000613223 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
SEMA6C-209ENST00000613223 DEPDC5O75140 1603 aa25.21■■□□□ 1.63
SEMA6C-209ENST00000613223 CCDC144AA2RUR9 1427 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms