RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
FDPS-221ENST00000612683 MLECQ14165 292 aa24.01■■□□□ 1.43
FDPS-221ENST00000612683 MADDQ8WXG6 1647 aa24.01■■□□□ 1.43
FDPS-221ENST00000612683 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
FDPS-221ENST00000612683 KIF14Q15058 1648 aa24■■□□□ 1.43
FDPS-221ENST00000612683 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
FDPS-221ENST00000612683 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
FDPS-221ENST00000612683 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
FDPS-221ENST00000612683 LRRIQ1Q96JM4 1722 aa23.97■■□□□ 1.43
FDPS-221ENST00000612683 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
FDPS-221ENST00000612683 AFAP1Q8N556 730 aa23.96■■□□□ 1.43
FDPS-221ENST00000612683 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.43
FDPS-221ENST00000612683 RIMS1Q86UR5 1692 aaKnown RBP23.94■■□□□ 1.42
FDPS-221ENST00000612683 ATP10AO60312 1499 aa23.93■■□□□ 1.42
FDPS-221ENST00000612683 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
FDPS-221ENST00000612683 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
FDPS-221ENST00000612683 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
FDPS-221ENST00000612683 ZNF518AQ6AHZ1 1483 aa23.88■■□□□ 1.41
FDPS-221ENST00000612683 C9orf84Q5VXU9 1444 aa23.86■■□□□ 1.41
FDPS-221ENST00000612683 CDC42BPBQ9Y5S2 1711 aa23.86■■□□□ 1.41
FDPS-221ENST00000612683 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
FDPS-221ENST00000612683 ZNF777Q9ULD5 760 aaPredicted RBP23.83■■□□□ 1.41
FDPS-221ENST00000612683 LMTK3Q96Q04 1460 aa23.82■■□□□ 1.4
FDPS-221ENST00000612683 HSPA2P54652 639 aa23.82■■□□□ 1.4
FDPS-221ENST00000612683 KDM5CP41229 1560 aa23.79■■□□□ 1.4
FDPS-221ENST00000612683 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
FDPS-221ENST00000612683 FER1L4A9Z1Z3 1794 aa23.79■■□□□ 1.4
FDPS-221ENST00000612683 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
FDPS-221ENST00000612683 CEBPAP49715 358 aaPredicted RBP23.78■■□□□ 1.4
FDPS-221ENST00000612683 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
FDPS-221ENST00000612683 MLH3Q9UHC1 1453 aa23.76■■□□□ 1.39
FDPS-221ENST00000612683 ABCC1P33527 1531 aa23.74■■□□□ 1.39
FDPS-221ENST00000612683 CDC42BPAQ5VT25 1732 aa23.74■■□□□ 1.39
FDPS-221ENST00000612683 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.39
FDPS-221ENST00000612683 DIP2CQ9Y2E4 1556 aa23.73■■□□□ 1.39
FDPS-221ENST00000612683 ESF1Q9H501 851 aaKnown RBP23.72■■□□□ 1.39
FDPS-221ENST00000612683 CFDP1Q9UEE9 299 aaPredicted RBP23.72■■□□□ 1.39
FDPS-221ENST00000612683 GPATCH8Q9UKJ3 1502 aaKnown RBP23.71■■□□□ 1.39
FDPS-221ENST00000612683 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.39
FDPS-221ENST00000612683 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
FDPS-221ENST00000612683 FBXO41Q8TF61 875 aa23.7■■□□□ 1.38
FDPS-221ENST00000612683 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
FDPS-221ENST00000612683 ABCA6Q8N139 1617 aa23.68■■□□□ 1.38
FDPS-221ENST00000612683 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
FDPS-221ENST00000612683 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
FDPS-221ENST00000612683 KIDINS220Q9ULH0 1771 aa23.65■■□□□ 1.38
FDPS-221ENST00000612683 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
FDPS-221ENST00000612683 AGLP35573 1532 aa23.63■■□□□ 1.37
FDPS-221ENST00000612683 CEP162Q5TB80 1403 aa23.62■■□□□ 1.37
FDPS-221ENST00000612683 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
FDPS-221ENST00000612683 SETD1BQ9UPS6 1966 aaKnown RBP23.61■■□□□ 1.37
FDPS-221ENST00000612683 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
FDPS-221ENST00000612683 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
FDPS-221ENST00000612683 PREX1Q8TCU6 1659 aa23.58■■□□□ 1.37
FDPS-221ENST00000612683 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.36
FDPS-221ENST00000612683 UHRF1BP1Q6BDS2 1440 aa23.57■■□□□ 1.36
FDPS-221ENST00000612683 LOC105371045A0A1W2PR82 267 aa23.56■■□□□ 1.36
FDPS-221ENST00000612683 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
FDPS-221ENST00000612683 DMRT2Q9Y5R5 561 aa23.53■■□□□ 1.36
FDPS-221ENST00000612683 C3P01024 1663 aa23.53■■□□□ 1.36
FDPS-221ENST00000612683 ATP7AQ04656 1500 aa23.52■■□□□ 1.36
FDPS-221ENST00000612683 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
FDPS-221ENST00000612683 GGT6Q6P531 493 aa23.51■■□□□ 1.35
FDPS-221ENST00000612683 CERKQ8TCT0 537 aa23.51■■□□□ 1.35
FDPS-221ENST00000612683 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
FDPS-221ENST00000612683 A2MP01023 1474 aa23.49■■□□□ 1.35
FDPS-221ENST00000612683 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
FDPS-221ENST00000612683 ZMYM3Q14202 1370 aa23.49■■□□□ 1.35
FDPS-221ENST00000612683 INO80Q9ULG1 1556 aaPredicted RBP23.45■■□□□ 1.34
FDPS-221ENST00000612683 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
FDPS-221ENST00000612683 STRCQ7RTU9 1775 aa23.44■■□□□ 1.34
FDPS-221ENST00000612683 NCOA2Q15596 1464 aa23.42■■□□□ 1.34
FDPS-221ENST00000612683 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
FDPS-221ENST00000612683 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
FDPS-221ENST00000612683 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
FDPS-221ENST00000612683 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
FDPS-221ENST00000612683 MROH2AA6NES4 1674 aa23.39■■□□□ 1.34
FDPS-221ENST00000612683 NPATQ14207 1427 aa23.39■■□□□ 1.33
FDPS-221ENST00000612683 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
FDPS-221ENST00000612683 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
FDPS-221ENST00000612683 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
FDPS-221ENST00000612683 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
FDPS-221ENST00000612683 KIF3BO15066 747 aa23.36■■□□□ 1.33
FDPS-221ENST00000612683 PTPRTO14522 1441 aa23.35■■□□□ 1.33
FDPS-221ENST00000612683 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
FDPS-221ENST00000612683 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
FDPS-221ENST00000612683 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
FDPS-221ENST00000612683 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
FDPS-221ENST00000612683 KANK4Q5T7N3 995 aaPredicted RBP23.32■■□□□ 1.32
FDPS-221ENST00000612683 PTPRKQ15262 1439 aa23.32■■□□□ 1.32
FDPS-221ENST00000612683 LRRC9Q6ZRR7 1453 aa23.31■■□□□ 1.32
FDPS-221ENST00000612683 NCOA1Q15788 1441 aa23.31■■□□□ 1.32
FDPS-221ENST00000612683 NCKAP5LQ9HCH0 1330 aa23.31■■□□□ 1.32
FDPS-221ENST00000612683 CAMSAP1Q5T5Y3 1602 aa23.29■■□□□ 1.32
FDPS-221ENST00000612683 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
FDPS-221ENST00000612683 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
FDPS-221ENST00000612683 APLP2Q06481 763 aa23.23■■□□□ 1.31
FDPS-221ENST00000612683 PKD2Q13563 968 aa23.23■■□□□ 1.31
FDPS-221ENST00000612683 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
FDPS-221ENST00000612683 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms