RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 AKNAQ7Z591 1439 aa20.8■□□□□ 0.92
PCDHGB1-202ENST00000611598 NBPF8Q3BBV2 869 aa20.8■□□□□ 0.92
PCDHGB1-202ENST00000611598 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
PCDHGB1-202ENST00000611598 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
PCDHGB1-202ENST00000611598 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
PCDHGB1-202ENST00000611598 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.92
PCDHGB1-202ENST00000611598 EPRSP07814 1512 aaKnown RBP20.76■□□□□ 0.91
PCDHGB1-202ENST00000611598 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
PCDHGB1-202ENST00000611598 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
PCDHGB1-202ENST00000611598 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
PCDHGB1-202ENST00000611598 MIA2Q96PC5 1412 aa20.72■□□□□ 0.91
PCDHGB1-202ENST00000611598 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
PCDHGB1-202ENST00000611598 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
PCDHGB1-202ENST00000611598 SPATA31E1Q6ZUB1 1445 aa20.7■□□□□ 0.9
PCDHGB1-202ENST00000611598 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
PCDHGB1-202ENST00000611598 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
PCDHGB1-202ENST00000611598 DAPK1P53355 1430 aa20.66■□□□□ 0.9
PCDHGB1-202ENST00000611598 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
PCDHGB1-202ENST00000611598 WDR62O43379 1518 aa20.65■□□□□ 0.9
PCDHGB1-202ENST00000611598 IQGAP2Q13576 1575 aa20.64■□□□□ 0.9
PCDHGB1-202ENST00000611598 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.9
PCDHGB1-202ENST00000611598 ABCC5O15440 1437 aa20.63■□□□□ 0.89
PCDHGB1-202ENST00000611598 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
PCDHGB1-202ENST00000611598 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
PCDHGB1-202ENST00000611598 POLR1AO95602 1720 aaPredicted RBP20.6■□□□□ 0.89
PCDHGB1-202ENST00000611598 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
PCDHGB1-202ENST00000611598 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
PCDHGB1-202ENST00000611598 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
PCDHGB1-202ENST00000611598 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.88
PCDHGB1-202ENST00000611598 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.88
PCDHGB1-202ENST00000611598 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
PCDHGB1-202ENST00000611598 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
PCDHGB1-202ENST00000611598 PZPP20742 1482 aa20.54■□□□□ 0.88
PCDHGB1-202ENST00000611598 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
PCDHGB1-202ENST00000611598 BCORL1Q5H9F3 1711 aa20.54■□□□□ 0.88
PCDHGB1-202ENST00000611598 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
PCDHGB1-202ENST00000611598 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
PCDHGB1-202ENST00000611598 PAK3O75914 559 aaPredicted RBP20.53■□□□□ 0.88
PCDHGB1-202ENST00000611598 USP47Q96K76 1375 aa20.52■□□□□ 0.88
PCDHGB1-202ENST00000611598 NOP58Q9Y2X3 529 aaKnown RBP20.51■□□□□ 0.87
PCDHGB1-202ENST00000611598 MBD5Q9P267 1494 aa20.51■□□□□ 0.87
PCDHGB1-202ENST00000611598 RNF123Q5XPI4 1314 aa20.5■□□□□ 0.87
PCDHGB1-202ENST00000611598 DEKP35659 375 aaKnown RBP20.49■□□□□ 0.87
PCDHGB1-202ENST00000611598 NUP153P49790 1475 aaKnown RBP20.48■□□□□ 0.87
PCDHGB1-202ENST00000611598 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
PCDHGB1-202ENST00000611598 NBR1Q14596 966 aa20.47■□□□□ 0.87
PCDHGB1-202ENST00000611598 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
PCDHGB1-202ENST00000611598 DISP1Q96F81 1524 aa20.44■□□□□ 0.86
PCDHGB1-202ENST00000611598 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
PCDHGB1-202ENST00000611598 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
PCDHGB1-202ENST00000611598 PKD2Q13563 968 aa20.43■□□□□ 0.86
PCDHGB1-202ENST00000611598 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
PCDHGB1-202ENST00000611598 KDM5CP41229 1560 aa20.43■□□□□ 0.86
PCDHGB1-202ENST00000611598 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
PCDHGB1-202ENST00000611598 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
PCDHGB1-202ENST00000611598 KIF14Q15058 1648 aa20.41■□□□□ 0.86
PCDHGB1-202ENST00000611598 CFDP1Q9UEE9 299 aaPredicted RBP20.41■□□□□ 0.86
PCDHGB1-202ENST00000611598 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
PCDHGB1-202ENST00000611598 ZNF777Q9ULD5 760 aaPredicted RBP20.4■□□□□ 0.86
PCDHGB1-202ENST00000611598 RAPGEF6Q8TEU7 1601 aa20.39■□□□□ 0.86
PCDHGB1-202ENST00000611598 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
PCDHGB1-202ENST00000611598 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
PCDHGB1-202ENST00000611598 IPO9Q96P70 1041 aaKnown RBP20.36■□□□□ 0.85
PCDHGB1-202ENST00000611598 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
PCDHGB1-202ENST00000611598 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
PCDHGB1-202ENST00000611598 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
PCDHGB1-202ENST00000611598 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
PCDHGB1-202ENST00000611598 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
PCDHGB1-202ENST00000611598 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
PCDHGB1-202ENST00000611598 ADGRL2O95490 1459 aa20.33■□□□□ 0.85
PCDHGB1-202ENST00000611598 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.84
PCDHGB1-202ENST00000611598 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
PCDHGB1-202ENST00000611598 LRPPRCP42704 1394 aaKnown RBP20.32■□□□□ 0.84
PCDHGB1-202ENST00000611598 UHRF1BP1Q6BDS2 1440 aa20.31■□□□□ 0.84
PCDHGB1-202ENST00000611598 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
PCDHGB1-202ENST00000611598 ST20-MTHFSA0A0A6YYL1 179 aa20.31■□□□□ 0.84
PCDHGB1-202ENST00000611598 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
PCDHGB1-202ENST00000611598 KDM2AQ9Y2K7 1162 aa20.3■□□□□ 0.84
PCDHGB1-202ENST00000611598 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
PCDHGB1-202ENST00000611598 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
PCDHGB1-202ENST00000611598 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
PCDHGB1-202ENST00000611598 ITSN2Q9NZM3 1697 aa20.29■□□□□ 0.84
PCDHGB1-202ENST00000611598 ZBTB47Q9UFB7 747 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB1-202ENST00000611598 RRP1P56182 461 aaKnown RBP20.28■□□□□ 0.84
PCDHGB1-202ENST00000611598 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
PCDHGB1-202ENST00000611598 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB1-202ENST00000611598 NUP155O75694 1391 aa20.28■□□□□ 0.84
PCDHGB1-202ENST00000611598 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.84
PCDHGB1-202ENST00000611598 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.83
PCDHGB1-202ENST00000611598 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
PCDHGB1-202ENST00000611598 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
PCDHGB1-202ENST00000611598 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
PCDHGB1-202ENST00000611598 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
PCDHGB1-202ENST00000611598 RALBP1Q15311 655 aa20.22■□□□□ 0.83
PCDHGB1-202ENST00000611598 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
PCDHGB1-202ENST00000611598 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
PCDHGB1-202ENST00000611598 ADCY10Q96PN6 1610 aa20.21■□□□□ 0.83
PCDHGB1-202ENST00000611598 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
PCDHGB1-202ENST00000611598 E9PCH4 1651 aa20.19■□□□□ 0.82
PCDHGB1-202ENST00000611598 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms