RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 SCAPERQ9BY12 1400 aa28.84■■■□□ 2.21
MUC1-224ENST00000611577 ATP1B4Q9UN42 357 aaPredicted RBP28.82■■■□□ 2.2
MUC1-224ENST00000611577 FMN1Q68DA7 1419 aa28.8■■■□□ 2.2
MUC1-224ENST00000611577 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
MUC1-224ENST00000611577 HSPA2P54652 639 aa28.79■■■□□ 2.2
MUC1-224ENST00000611577 MLECQ14165 292 aa28.79■■■□□ 2.2
MUC1-224ENST00000611577 FER1L4A9Z1Z3 1794 aa28.75■■■□□ 2.19
MUC1-224ENST00000611577 MYO5CQ9NQX4 1742 aa28.75■■■□□ 2.19
MUC1-224ENST00000611577 ARHGAP35Q9NRY4 1499 aa28.75■■■□□ 2.19
MUC1-224ENST00000611577 EFCAB2Q5VUJ9 269 aa28.73■■■□□ 2.19
MUC1-224ENST00000611577 CDK11AQ9UQ88 783 aaPredicted RBP28.72■■■□□ 2.19
MUC1-224ENST00000611577 KIF14Q15058 1648 aa28.72■■■□□ 2.19
MUC1-224ENST00000611577 ATP10AO60312 1499 aa28.72■■■□□ 2.19
MUC1-224ENST00000611577 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
MUC1-224ENST00000611577 ARHGEF12Q9NZN5 1544 aa28.68■■■□□ 2.18
MUC1-224ENST00000611577 TROQ12816 1431 aaPredicted RBP28.67■■■□□ 2.18
MUC1-224ENST00000611577 ARHGAP5Q13017 1502 aa28.66■■■□□ 2.18
MUC1-224ENST00000611577 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
MUC1-224ENST00000611577 CLIP1P30622 1438 aa28.64■■■□□ 2.18
MUC1-224ENST00000611577 KDM5CP41229 1560 aa28.6■■■□□ 2.17
MUC1-224ENST00000611577 AFAP1Q8N556 730 aa28.58■■■□□ 2.17
MUC1-224ENST00000611577 LRRIQ1Q96JM4 1722 aa28.57■■■□□ 2.16
MUC1-224ENST00000611577 MYT1LQ9UL68 1186 aa28.57■■■□□ 2.16
MUC1-224ENST00000611577 PREX1Q8TCU6 1659 aa28.57■■■□□ 2.16
MUC1-224ENST00000611577 CEBPAP49715 358 aaPredicted RBP28.55■■■□□ 2.16
MUC1-224ENST00000611577 DIP2CQ9Y2E4 1556 aa28.54■■■□□ 2.16
MUC1-224ENST00000611577 CERKQ8TCT0 537 aa28.53■■■□□ 2.16
MUC1-224ENST00000611577 CDC42BPBQ9Y5S2 1711 aa28.5■■■□□ 2.15
MUC1-224ENST00000611577 ABCA6Q8N139 1617 aa28.49■■■□□ 2.15
MUC1-224ENST00000611577 REREQ9P2R6 1566 aa28.49■■■□□ 2.15
MUC1-224ENST00000611577 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
MUC1-224ENST00000611577 CCDC18Q5T9S5 1454 aa28.47■■■□□ 2.15
MUC1-224ENST00000611577 MLH3Q9UHC1 1453 aa28.47■■■□□ 2.15
MUC1-224ENST00000611577 ABCC1P33527 1531 aa28.47■■■□□ 2.15
MUC1-224ENST00000611577 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
MUC1-224ENST00000611577 CASKIN1Q8WXD9 1431 aa28.45■■■□□ 2.15
MUC1-224ENST00000611577 TRAPPC8Q9Y2L5 1435 aa28.44■■■□□ 2.14
MUC1-224ENST00000611577 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
MUC1-224ENST00000611577 AGLP35573 1532 aa28.39■■■□□ 2.14
MUC1-224ENST00000611577 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
MUC1-224ENST00000611577 DMRT2Q9Y5R5 561 aa28.38■■■□□ 2.13
MUC1-224ENST00000611577 ESF1Q9H501 851 aaKnown RBP28.37■■■□□ 2.13
MUC1-224ENST00000611577 C3P01024 1663 aa28.37■■■□□ 2.13
MUC1-224ENST00000611577 SETD1BQ9UPS6 1966 aaKnown RBP28.35■■■□□ 2.13
MUC1-224ENST00000611577 CDC42BPAQ5VT25 1732 aa28.35■■■□□ 2.13
MUC1-224ENST00000611577 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
MUC1-224ENST00000611577 KIDINS220Q9ULH0 1771 aa28.33■■■□□ 2.13
MUC1-224ENST00000611577 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
MUC1-224ENST00000611577 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
MUC1-224ENST00000611577 SAMD9LQ8IVG5 1584 aa28.28■■■□□ 2.12
MUC1-224ENST00000611577 CNTLNQ9NXG0 1405 aa28.28■■■□□ 2.12
MUC1-224ENST00000611577 SYCP2Q9BX26 1530 aa28.27■■■□□ 2.12
MUC1-224ENST00000611577 PTPRTO14522 1441 aa28.26■■■□□ 2.11
MUC1-224ENST00000611577 GPATCH8Q9UKJ3 1502 aaKnown RBP28.23■■■□□ 2.11
MUC1-224ENST00000611577 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
MUC1-224ENST00000611577 CEP162Q5TB80 1403 aa28.2■■■□□ 2.11
MUC1-224ENST00000611577 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
MUC1-224ENST00000611577 HNRNPMP52272 730 aaKnown RBP eCLIP28.18■■■□□ 2.1
MUC1-224ENST00000611577 MROH2AA6NES4 1674 aa28.18■■■□□ 2.1
MUC1-224ENST00000611577 ATP7AQ04656 1500 aa28.17■■■□□ 2.1
MUC1-224ENST00000611577 SUPT6HQ7KZ85 1726 aaKnown RBP28.16■■■□□ 2.1
MUC1-224ENST00000611577 NPATQ14207 1427 aa28.16■■■□□ 2.1
MUC1-224ENST00000611577 PLEKHH2Q8IVE3 1493 aa28.15■■■□□ 2.1
MUC1-224ENST00000611577 CFDP1Q9UEE9 299 aaPredicted RBP28.14■■■□□ 2.1
MUC1-224ENST00000611577 KIAA1107Q9UPP5 1409 aa28.14■■■□□ 2.1
MUC1-224ENST00000611577 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
MUC1-224ENST00000611577 CCNB3Q8WWL7 1395 aa28.13■■■□□ 2.09
MUC1-224ENST00000611577 INO80Q9ULG1 1556 aaPredicted RBP28.13■■■□□ 2.09
MUC1-224ENST00000611577 CAMSAP1Q5T5Y3 1602 aa28.12■■■□□ 2.09
MUC1-224ENST00000611577 LTBP4Q8N2S1 1624 aa28.12■■■□□ 2.09
MUC1-224ENST00000611577 PLXNC1O60486 1568 aa28.11■■■□□ 2.09
MUC1-224ENST00000611577 DISP3Q9P2K9 1392 aa28.11■■■□□ 2.09
MUC1-224ENST00000611577 A2MP01023 1474 aa28.1■■■□□ 2.09
MUC1-224ENST00000611577 CLTCQ00610 1675 aaKnown RBP28.09■■■□□ 2.09
MUC1-224ENST00000611577 MTUS2Q5JR59 1369 aa28.09■■■□□ 2.09
MUC1-224ENST00000611577 IQSEC2Q5JU85 1478 aa28.05■■■□□ 2.08
MUC1-224ENST00000611577 MYO3AQ8NEV4 1616 aa28.04■■■□□ 2.08
MUC1-224ENST00000611577 GGT6Q6P531 493 aa28.03■■■□□ 2.08
MUC1-224ENST00000611577 ZNF142P52746 1687 aaPredicted RBP28.01■■■□□ 2.07
MUC1-224ENST00000611577 NCKAP5LQ9HCH0 1330 aa28.01■■■□□ 2.07
MUC1-224ENST00000611577 PTPRKQ15262 1439 aa28.01■■■□□ 2.07
MUC1-224ENST00000611577 TIAM1Q13009 1591 aa28■■■□□ 2.07
MUC1-224ENST00000611577 ADGBQ8N7X0 1667 aa28■■■□□ 2.07
MUC1-224ENST00000611577 CEP170BQ9Y4F5 1589 aaPredicted RBP27.99■■■□□ 2.07
MUC1-224ENST00000611577 EHBP1L1Q8N3D4 1523 aa27.98■■■□□ 2.07
MUC1-224ENST00000611577 ZNF644Q9H582 1327 aaPredicted RBP27.98■■■□□ 2.07
MUC1-224ENST00000611577 ILDR2Q71H61 639 aa27.98■■■□□ 2.07
MUC1-224ENST00000611577 PLA2R1Q13018 1463 aa27.97■■■□□ 2.07
MUC1-224ENST00000611577 SPATA31D1Q6ZQQ2 1576 aa27.97■■■□□ 2.07
MUC1-224ENST00000611577 ZNF335Q9H4Z2 1342 aaPredicted RBP27.95■■■□□ 2.07
MUC1-224ENST00000611577 MBD5Q9P267 1494 aa27.95■■■□□ 2.06
MUC1-224ENST00000611577 PKD2Q13563 968 aa27.94■■■□□ 2.06
MUC1-224ENST00000611577 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
MUC1-224ENST00000611577 TCOF1Q13428 1488 aaKnown RBP27.92■■■□□ 2.06
MUC1-224ENST00000611577 RTEL1-TNFRSF6BF6WH68 1400 aa27.9■■■□□ 2.06
MUC1-224ENST00000611577 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
MUC1-224ENST00000611577 A2ML1A8K2U0 1454 aa27.86■■■□□ 2.05
MUC1-224ENST00000611577 UBAP1LF5GYI3 381 aa27.85■■■□□ 2.05
MUC1-224ENST00000611577 SOCS7O14512 581 aa27.85■■■□□ 2.05
MUC1-224ENST00000611577 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms