RNA–Protein interactions for RNA: ENST00000610727.1

PRKCQ-204, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-204ENST00000610727 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
PRKCQ-204ENST00000610727 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
PRKCQ-204ENST00000610727 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
PRKCQ-204ENST00000610727 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
PRKCQ-204ENST00000610727 MIER1Q8N108 512 aa11.21□□□□□ -0.61
PRKCQ-204ENST00000610727 EHBP1L1Q8N3D4 1523 aa11.21□□□□□ -0.61
PRKCQ-204ENST00000610727 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
PRKCQ-204ENST00000610727 GPATCH8Q9UKJ3 1502 aaKnown RBP11.19□□□□□ -0.62
PRKCQ-204ENST00000610727 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
PRKCQ-204ENST00000610727 ADCY10Q96PN6 1610 aa11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 TSPY4P0CV99 314 aa11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 TSPY10P0CW01 314 aa11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 FOXD1Q16676 465 aa11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
PRKCQ-204ENST00000610727 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
PRKCQ-204ENST00000610727 KDM5BQ9UGL1 1544 aa11.17□□□□□ -0.62
PRKCQ-204ENST00000610727 RIMBP3CA6NJZ7 1639 aa11.16□□□□□ -0.62
PRKCQ-204ENST00000610727 RIMBP3BA6NNM3 1639 aa11.16□□□□□ -0.62
PRKCQ-204ENST00000610727 RIMBP3Q9UFD9 1639 aa11.16□□□□□ -0.62
PRKCQ-204ENST00000610727 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
PRKCQ-204ENST00000610727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
PRKCQ-204ENST00000610727 ZCCHC11Q5TAX3 1644 aaKnown RBP11.14□□□□□ -0.63
PRKCQ-204ENST00000610727 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
PRKCQ-204ENST00000610727 ARHGAP5Q13017 1502 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 PTPN23Q9H3S7 1636 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 WDR7Q9Y4E6 1490 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 ABCC5O15440 1437 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 UHRF1BP1LA0JNW5 1464 aa11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRKCQ-204ENST00000610727 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
PRKCQ-204ENST00000610727 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
PRKCQ-204ENST00000610727 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
PRKCQ-204ENST00000610727 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
PRKCQ-204ENST00000610727 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
PRKCQ-204ENST00000610727 DAPK1P53355 1430 aa11.09□□□□□ -0.63
PRKCQ-204ENST00000610727 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
PRKCQ-204ENST00000610727 PLCH2O75038 1416 aa11.07□□□□□ -0.64
PRKCQ-204ENST00000610727 NAIPQ13075 1403 aa11.07□□□□□ -0.64
PRKCQ-204ENST00000610727 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
PRKCQ-204ENST00000610727 TRAPPC8Q9Y2L5 1435 aa11.07□□□□□ -0.64
PRKCQ-204ENST00000610727 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
PRKCQ-204ENST00000610727 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
PRKCQ-204ENST00000610727 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
PRKCQ-204ENST00000610727 FANCAO15360 1455 aa11.05□□□□□ -0.64
PRKCQ-204ENST00000610727 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
PRKCQ-204ENST00000610727 CDC42BPAQ5VT25 1732 aa11.04□□□□□ -0.64
PRKCQ-204ENST00000610727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 GGT6Q6P531 493 aa11.03□□□□□ -0.64
PRKCQ-204ENST00000610727 TCOF1Q13428 1488 aaKnown RBP11.02□□□□□ -0.64
PRKCQ-204ENST00000610727 ANKRD30AQ9BXX3 1397 aa11.02□□□□□ -0.64
PRKCQ-204ENST00000610727 MBD5Q9P267 1494 aa11.02□□□□□ -0.65
PRKCQ-204ENST00000610727 KIF3BO15066 747 aa11.02□□□□□ -0.65
PRKCQ-204ENST00000610727 MLECQ14165 292 aa11.02□□□□□ -0.65
PRKCQ-204ENST00000610727 HFM1A2PYH4 1435 aa11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 PLPPR3Q6T4P5 718 aa11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 SAMD9LQ8IVG5 1584 aa11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 KDM6BO15054 1643 aa11.01□□□□□ -0.65
PRKCQ-204ENST00000610727 PKD2Q13563 968 aa11□□□□□ -0.65
PRKCQ-204ENST00000610727 NUP155O75694 1391 aa11□□□□□ -0.65
PRKCQ-204ENST00000610727 AKNAQ7Z591 1439 aa11□□□□□ -0.65
PRKCQ-204ENST00000610727 ADGRL1O94910 1474 aa11□□□□□ -0.65
PRKCQ-204ENST00000610727 ANKRD50Q9ULJ7 1429 aa10.99□□□□□ -0.65
PRKCQ-204ENST00000610727 TSPOAP1O95153 1857 aa10.99□□□□□ -0.65
PRKCQ-204ENST00000610727 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
PRKCQ-204ENST00000610727 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
PRKCQ-204ENST00000610727 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
PRKCQ-204ENST00000610727 ZNF326Q5BKZ1 582 aaKnown RBP10.97□□□□□ -0.65
PRKCQ-204ENST00000610727 RBM19Q9Y4C8 960 aaKnown RBP10.97□□□□□ -0.65
PRKCQ-204ENST00000610727 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.66
PRKCQ-204ENST00000610727 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.66
PRKCQ-204ENST00000610727 RGL3Q3MIN7 710 aa10.95□□□□□ -0.66
PRKCQ-204ENST00000610727 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
PRKCQ-204ENST00000610727 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
PRKCQ-204ENST00000610727 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
PRKCQ-204ENST00000610727 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
PRKCQ-204ENST00000610727 KIAA1107Q9UPP5 1409 aa10.93□□□□□ -0.66
PRKCQ-204ENST00000610727 ARID4BQ4LE39 1312 aaPredicted RBP10.93□□□□□ -0.66
PRKCQ-204ENST00000610727 ROCK1Q13464 1354 aa10.93□□□□□ -0.66
PRKCQ-204ENST00000610727 ABCA9Q8IUA7 1624 aa10.91□□□□□ -0.66
PRKCQ-204ENST00000610727 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
PRKCQ-204ENST00000610727 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
PRKCQ-204ENST00000610727 YEATS2Q9ULM3 1422 aa10.9□□□□□ -0.66
PRKCQ-204ENST00000610727 ABCC1P33527 1531 aa10.89□□□□□ -0.67
PRKCQ-204ENST00000610727 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
PRKCQ-204ENST00000610727 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
PRKCQ-204ENST00000610727 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
PRKCQ-204ENST00000610727 MSH5O43196 834 aa10.88□□□□□ -0.67
PRKCQ-204ENST00000610727 L3MBTL2Q969R5 705 aa10.88□□□□□ -0.67
PRKCQ-204ENST00000610727 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
PRKCQ-204ENST00000610727 BCANQ96GW7 911 aa10.87□□□□□ -0.67
PRKCQ-204ENST00000610727 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms