RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
LMBR1-221ENST00000609774 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
LMBR1-221ENST00000609774 TTBK1Q5TCY1 1321 aaPredicted RBP11.81□□□□□ -0.52
LMBR1-221ENST00000609774 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
LMBR1-221ENST00000609774 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
LMBR1-221ENST00000609774 LMTK3Q96Q04 1460 aa11.79□□□□□ -0.52
LMBR1-221ENST00000609774 BCORL1Q5H9F3 1711 aa11.79□□□□□ -0.52
LMBR1-221ENST00000609774 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
LMBR1-221ENST00000609774 CTTNBP2Q8WZ74 1663 aa11.77□□□□□ -0.53
LMBR1-221ENST00000609774 NEO1Q92859 1461 aa11.76□□□□□ -0.53
LMBR1-221ENST00000609774 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
LMBR1-221ENST00000609774 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
LMBR1-221ENST00000609774 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
LMBR1-221ENST00000609774 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
LMBR1-221ENST00000609774 FRMPD1Q5SYB0 1578 aa11.72□□□□□ -0.53
LMBR1-221ENST00000609774 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
LMBR1-221ENST00000609774 ATP10BO94823 1461 aa11.71□□□□□ -0.53
LMBR1-221ENST00000609774 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
LMBR1-221ENST00000609774 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
LMBR1-221ENST00000609774 SOCS7O14512 581 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 FHOD3Q2V2M9 1422 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 RICTORQ6R327 1708 aa11.66□□□□□ -0.54
LMBR1-221ENST00000609774 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
LMBR1-221ENST00000609774 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.55
LMBR1-221ENST00000609774 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.55
LMBR1-221ENST00000609774 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
LMBR1-221ENST00000609774 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
LMBR1-221ENST00000609774 POGZQ7Z3K3 1410 aa11.62□□□□□ -0.55
LMBR1-221ENST00000609774 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
LMBR1-221ENST00000609774 FAM9AQ8IZU1 332 aaPredicted RBP11.62□□□□□ -0.55
LMBR1-221ENST00000609774 DENND4BO75064 1496 aaPredicted RBP11.62□□□□□ -0.55
LMBR1-221ENST00000609774 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
LMBR1-221ENST00000609774 FANCAO15360 1455 aa11.61□□□□□ -0.55
LMBR1-221ENST00000609774 CFAP74Q9C0B2 1584 aa11.6□□□□□ -0.55
LMBR1-221ENST00000609774 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
LMBR1-221ENST00000609774 EFCAB5A4FU69 1503 aa11.59□□□□□ -0.55
LMBR1-221ENST00000609774 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
LMBR1-221ENST00000609774 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
LMBR1-221ENST00000609774 SIGLEC1Q9BZZ2 1709 aa11.58□□□□□ -0.56
LMBR1-221ENST00000609774 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
LMBR1-221ENST00000609774 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
LMBR1-221ENST00000609774 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
LMBR1-221ENST00000609774 PREX1Q8TCU6 1659 aa11.57□□□□□ -0.56
LMBR1-221ENST00000609774 HSPA2P54652 639 aa11.57□□□□□ -0.56
LMBR1-221ENST00000609774 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
LMBR1-221ENST00000609774 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
LMBR1-221ENST00000609774 ARHGEF12Q9NZN5 1544 aa11.56□□□□□ -0.56
LMBR1-221ENST00000609774 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
LMBR1-221ENST00000609774 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
LMBR1-221ENST00000609774 STRCQ7RTU9 1775 aa11.56□□□□□ -0.56
LMBR1-221ENST00000609774 IQSEC2Q5JU85 1478 aa11.55□□□□□ -0.56
LMBR1-221ENST00000609774 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
LMBR1-221ENST00000609774 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
LMBR1-221ENST00000609774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.53□□□□□ -0.56
LMBR1-221ENST00000609774 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
LMBR1-221ENST00000609774 MYT1Q01538 1121 aa11.52□□□□□ -0.57
LMBR1-221ENST00000609774 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
LMBR1-221ENST00000609774 PTPRTO14522 1441 aa11.52□□□□□ -0.57
LMBR1-221ENST00000609774 ATP10AO60312 1499 aa11.51□□□□□ -0.57
LMBR1-221ENST00000609774 SPATA31D1Q6ZQQ2 1576 aa11.5□□□□□ -0.57
LMBR1-221ENST00000609774 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
LMBR1-221ENST00000609774 PLCH2O75038 1416 aa11.48□□□□□ -0.57
LMBR1-221ENST00000609774 C9orf84Q5VXU9 1444 aa11.48□□□□□ -0.57
LMBR1-221ENST00000609774 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
LMBR1-221ENST00000609774 LTBP4Q8N2S1 1624 aa11.48□□□□□ -0.57
LMBR1-221ENST00000609774 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
LMBR1-221ENST00000609774 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.57
LMBR1-221ENST00000609774 UHRF1BP1Q6BDS2 1440 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 SCAPERQ9BY12 1400 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 EVX2Q03828 476 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 P3H3Q8IVL6 736 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 KDM5CP41229 1560 aa11.45□□□□□ -0.58
LMBR1-221ENST00000609774 HAX1O00165 279 aa11.43□□□□□ -0.58
LMBR1-221ENST00000609774 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
LMBR1-221ENST00000609774 AGLP35573 1532 aa11.42□□□□□ -0.58
LMBR1-221ENST00000609774 ZNF518AQ6AHZ1 1483 aa11.41□□□□□ -0.58
LMBR1-221ENST00000609774 C3P01024 1663 aa11.4□□□□□ -0.58
LMBR1-221ENST00000609774 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
LMBR1-221ENST00000609774 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 MLECQ14165 292 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 EEA1Q15075 1411 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 MYO5CQ9NQX4 1742 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
LMBR1-221ENST00000609774 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
LMBR1-221ENST00000609774 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
LMBR1-221ENST00000609774 EFCAB2Q5VUJ9 269 aa11.38□□□□□ -0.59
LMBR1-221ENST00000609774 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
LMBR1-221ENST00000609774 NPATQ14207 1427 aa11.36□□□□□ -0.59
LMBR1-221ENST00000609774 CNTLNQ9NXG0 1405 aa11.36□□□□□ -0.59
LMBR1-221ENST00000609774 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
LMBR1-221ENST00000609774 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
LMBR1-221ENST00000609774 MROH2AA6NES4 1674 aa11.35□□□□□ -0.59
LMBR1-221ENST00000609774 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms