RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
CTSA-219ENST00000607841 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
CTSA-219ENST00000607841 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
CTSA-219ENST00000607841 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
CTSA-219ENST00000607841 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
CTSA-219ENST00000607841 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
CTSA-219ENST00000607841 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
CTSA-219ENST00000607841 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
CTSA-219ENST00000607841 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
CTSA-219ENST00000607841 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
CTSA-219ENST00000607841 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
CTSA-219ENST00000607841 RAPGEF3O95398 923 aa22.15■■□□□ 1.14
CTSA-219ENST00000607841 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
CTSA-219ENST00000607841 CDC42BPBQ9Y5S2 1711 aa22.13■■□□□ 1.13
CTSA-219ENST00000607841 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
CTSA-219ENST00000607841 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
CTSA-219ENST00000607841 MYOM3Q5VTT5 1437 aa22.07■■□□□ 1.12
CTSA-219ENST00000607841 POGZQ7Z3K3 1410 aa22.07■■□□□ 1.12
CTSA-219ENST00000607841 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
CTSA-219ENST00000607841 ABCC1P33527 1531 aa22.06■■□□□ 1.12
CTSA-219ENST00000607841 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
CTSA-219ENST00000607841 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
CTSA-219ENST00000607841 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
CTSA-219ENST00000607841 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
CTSA-219ENST00000607841 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
CTSA-219ENST00000607841 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
CTSA-219ENST00000607841 RSPH4AQ5TD94 716 aa22.02■■□□□ 1.12
CTSA-219ENST00000607841 ARHGEF12Q9NZN5 1544 aa22.01■■□□□ 1.11
CTSA-219ENST00000607841 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
CTSA-219ENST00000607841 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
CTSA-219ENST00000607841 MAGI2Q86UL8 1455 aa22.01■■□□□ 1.11
CTSA-219ENST00000607841 TRAPPC8Q9Y2L5 1435 aa22■■□□□ 1.11
CTSA-219ENST00000607841 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
CTSA-219ENST00000607841 RICTORQ6R327 1708 aa22■■□□□ 1.11
CTSA-219ENST00000607841 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
CTSA-219ENST00000607841 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
CTSA-219ENST00000607841 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
CTSA-219ENST00000607841 FGD6Q6ZV73 1430 aa21.96■■□□□ 1.11
CTSA-219ENST00000607841 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
CTSA-219ENST00000607841 SPAG9O60271 1321 aaKnown RBP21.95■■□□□ 1.1
CTSA-219ENST00000607841 KDM5CP41229 1560 aa21.95■■□□□ 1.1
CTSA-219ENST00000607841 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
CTSA-219ENST00000607841 ZFYVE16Q7Z3T8 1539 aa21.93■■□□□ 1.1
CTSA-219ENST00000607841 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
CTSA-219ENST00000607841 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
CTSA-219ENST00000607841 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
CTSA-219ENST00000607841 YEATS2Q9ULM3 1422 aa21.9■■□□□ 1.1
CTSA-219ENST00000607841 HECW2Q9P2P5 1572 aa21.89■■□□□ 1.09
CTSA-219ENST00000607841 ARHGEF40Q8TER5 1519 aa21.89■■□□□ 1.09
CTSA-219ENST00000607841 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
CTSA-219ENST00000607841 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
CTSA-219ENST00000607841 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
CTSA-219ENST00000607841 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
CTSA-219ENST00000607841 ATP10AO60312 1499 aa21.87■■□□□ 1.09
CTSA-219ENST00000607841 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
CTSA-219ENST00000607841 ARID4BQ4LE39 1312 aaPredicted RBP21.85■■□□□ 1.09
CTSA-219ENST00000607841 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
CTSA-219ENST00000607841 ATP7AQ04656 1500 aa21.82■■□□□ 1.08
CTSA-219ENST00000607841 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
CTSA-219ENST00000607841 ABCC5O15440 1437 aa21.8■■□□□ 1.08
CTSA-219ENST00000607841 INO80Q9ULG1 1556 aaPredicted RBP21.79■■□□□ 1.08
CTSA-219ENST00000607841 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
CTSA-219ENST00000607841 DAPK1P53355 1430 aa21.79■■□□□ 1.08
CTSA-219ENST00000607841 KIDINS220Q9ULH0 1771 aa21.79■■□□□ 1.08
CTSA-219ENST00000607841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.78■■□□□ 1.08
CTSA-219ENST00000607841 ABCA6Q8N139 1617 aa21.77■■□□□ 1.07
CTSA-219ENST00000607841 REREQ9P2R6 1566 aa21.76■■□□□ 1.07
CTSA-219ENST00000607841 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
CTSA-219ENST00000607841 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
CTSA-219ENST00000607841 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
CTSA-219ENST00000607841 DNMT1P26358 1616 aaKnown RBP21.74■■□□□ 1.07
CTSA-219ENST00000607841 A2MP01023 1474 aa21.74■■□□□ 1.07
CTSA-219ENST00000607841 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
CTSA-219ENST00000607841 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
CTSA-219ENST00000607841 AGLP35573 1532 aa21.7■■□□□ 1.07
CTSA-219ENST00000607841 MLECQ14165 292 aa21.7■■□□□ 1.06
CTSA-219ENST00000607841 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
CTSA-219ENST00000607841 ADGBQ8N7X0 1667 aa21.67■■□□□ 1.06
CTSA-219ENST00000607841 ITGAEP38570 1179 aa21.67■■□□□ 1.06
CTSA-219ENST00000607841 RRP7BPQ9NSQ0 103 aa21.67■■□□□ 1.06
CTSA-219ENST00000607841 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
CTSA-219ENST00000607841 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
CTSA-219ENST00000607841 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
CTSA-219ENST00000607841 NCOA1Q15788 1441 aa21.64■■□□□ 1.06
CTSA-219ENST00000607841 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
CTSA-219ENST00000607841 KIF3BO15066 747 aa21.63■■□□□ 1.05
CTSA-219ENST00000607841 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
CTSA-219ENST00000607841 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
CTSA-219ENST00000607841 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
CTSA-219ENST00000607841 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
CTSA-219ENST00000607841 GGT6Q6P531 493 aa21.62■■□□□ 1.05
CTSA-219ENST00000607841 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
CTSA-219ENST00000607841 ROCK1Q13464 1354 aa21.61■■□□□ 1.05
CTSA-219ENST00000607841 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
CTSA-219ENST00000607841 ADAMTSL3P82987 1691 aa21.6■■□□□ 1.05
CTSA-219ENST00000607841 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
CTSA-219ENST00000607841 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
CTSA-219ENST00000607841 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
CTSA-219ENST00000607841 CNTLNQ9NXG0 1405 aa21.54■■□□□ 1.04
CTSA-219ENST00000607841 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms