RNA–Protein interactions for RNA: ENST00000604485.1

LINC01050-201, Transcript of long intergenic non-protein coding RNA 1050, humanhuman

TSL 3 BASIC

Gene LINC01050, Length 760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01050-201ENST00000604485 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
LINC01050-201ENST00000604485 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
LINC01050-201ENST00000604485 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
LINC01050-201ENST00000604485 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
LINC01050-201ENST00000604485 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
LINC01050-201ENST00000604485 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
LINC01050-201ENST00000604485 EMP3P54852 163 aa11.23□□□□□ -0.61
LINC01050-201ENST00000604485 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
LINC01050-201ENST00000604485 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
LINC01050-201ENST00000604485 BCANQ96GW7 911 aa11.21□□□□□ -0.61
LINC01050-201ENST00000604485 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
LINC01050-201ENST00000604485 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
LINC01050-201ENST00000604485 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
LINC01050-201ENST00000604485 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
LINC01050-201ENST00000604485 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
LINC01050-201ENST00000604485 SOX12O15370 315 aa11.19□□□□□ -0.62
LINC01050-201ENST00000604485 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
LINC01050-201ENST00000604485 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
LINC01050-201ENST00000604485 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
LINC01050-201ENST00000604485 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
LINC01050-201ENST00000604485 NLRP6P59044 892 aa11.15□□□□□ -0.62
LINC01050-201ENST00000604485 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
LINC01050-201ENST00000604485 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
LINC01050-201ENST00000604485 PPP1R37O75864 691 aa11.11□□□□□ -0.63
LINC01050-201ENST00000604485 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
LINC01050-201ENST00000604485 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
LINC01050-201ENST00000604485 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
LINC01050-201ENST00000604485 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
LINC01050-201ENST00000604485 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
LINC01050-201ENST00000604485 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
LINC01050-201ENST00000604485 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
LINC01050-201ENST00000604485 PDCD7Q8N8D1 485 aaKnown RBP11□□□□□ -0.65
LINC01050-201ENST00000604485 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
LINC01050-201ENST00000604485 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
LINC01050-201ENST00000604485 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
LINC01050-201ENST00000604485 NBR1Q14596 966 aa10.94□□□□□ -0.66
LINC01050-201ENST00000604485 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
LINC01050-201ENST00000604485 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
LINC01050-201ENST00000604485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC01050-201ENST00000604485 MFSD10Q14728 455 aa10.91□□□□□ -0.66
LINC01050-201ENST00000604485 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
LINC01050-201ENST00000604485 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
LINC01050-201ENST00000604485 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
LINC01050-201ENST00000604485 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
LINC01050-201ENST00000604485 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
LINC01050-201ENST00000604485 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
LINC01050-201ENST00000604485 PDE4AP27815 886 aa10.86□□□□□ -0.67
LINC01050-201ENST00000604485 ERBB3P21860 1342 aa10.85□□□□□ -0.67
LINC01050-201ENST00000604485 PRKCSHP14314 528 aaPredicted RBP10.85□□□□□ -0.67
LINC01050-201ENST00000604485 E2F4Q16254 413 aa10.83□□□□□ -0.68
LINC01050-201ENST00000604485 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
LINC01050-201ENST00000604485 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
LINC01050-201ENST00000604485 LARP6Q9BRS8 491 aaKnown RBP10.82□□□□□ -0.68
LINC01050-201ENST00000604485 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
LINC01050-201ENST00000604485 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
LINC01050-201ENST00000604485 ARIH1Q9Y4X5 557 aaPredicted RBP10.81□□□□□ -0.68
LINC01050-201ENST00000604485 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
LINC01050-201ENST00000604485 ZNF710Q8N1W2 664 aa10.8□□□□□ -0.68
LINC01050-201ENST00000604485 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
LINC01050-201ENST00000604485 EIF4G1Q04637 1599 aaKnown RBP10.79□□□□□ -0.68
LINC01050-201ENST00000604485 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
LINC01050-201ENST00000604485 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
LINC01050-201ENST00000604485 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
LINC01050-201ENST00000604485 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
LINC01050-201ENST00000604485 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
LINC01050-201ENST00000604485 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
LINC01050-201ENST00000604485 KIF3CO14782 793 aa10.74□□□□□ -0.69
LINC01050-201ENST00000604485 DOK7Q18PE1 504 aa10.74□□□□□ -0.69
LINC01050-201ENST00000604485 PTGER2P43116 358 aa10.73□□□□□ -0.69
LINC01050-201ENST00000604485 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
LINC01050-201ENST00000604485 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
LINC01050-201ENST00000604485 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
LINC01050-201ENST00000604485 FOXK1P85037 733 aa10.71□□□□□ -0.69
LINC01050-201ENST00000604485 DSG2Q14126 1118 aa10.7□□□□□ -0.7
LINC01050-201ENST00000604485 ZNF687Q8N1G0 1237 aa10.7□□□□□ -0.7
LINC01050-201ENST00000604485 TESPA1A2RU30 521 aaPredicted RBP10.69□□□□□ -0.7
LINC01050-201ENST00000604485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC01050-201ENST00000604485 G3V3G9 751 aa10.68□□□□□ -0.7
LINC01050-201ENST00000604485 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
LINC01050-201ENST00000604485 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 SEMA3EO15041 775 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 TMEM92Q6UXU6 159 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 TMC2Q8TDI7 906 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 ATAD2BQ9ULI0 1458 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
LINC01050-201ENST00000604485 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
LINC01050-201ENST00000604485 WIZO95785 1651 aa10.63□□□□□ -0.71
LINC01050-201ENST00000604485 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
LINC01050-201ENST00000604485 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
LINC01050-201ENST00000604485 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
LINC01050-201ENST00000604485 PDIA6Q15084 440 aa10.59□□□□□ -0.71
LINC01050-201ENST00000604485 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
LINC01050-201ENST00000604485 PLA2G2EQ9NZK7 142 aa10.59□□□□□ -0.71
LINC01050-201ENST00000604485 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
LINC01050-201ENST00000604485 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
LINC01050-201ENST00000604485 DPYSL4O14531 572 aa10.57□□□□□ -0.72
LINC01050-201ENST00000604485 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
LINC01050-201ENST00000604485 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms