RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 DNMT1P26358 1616 aaKnown RBP21.79■■□□□ 1.08
CCDC12-211ENST00000604367 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
CCDC12-211ENST00000604367 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
CCDC12-211ENST00000604367 CAMSAP2Q08AD1 1489 aa21.78■■□□□ 1.08
CCDC12-211ENST00000604367 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
CCDC12-211ENST00000604367 ROCK1Q13464 1354 aa21.73■■□□□ 1.07
CCDC12-211ENST00000604367 MIER1Q8N108 512 aa21.72■■□□□ 1.07
CCDC12-211ENST00000604367 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
CCDC12-211ENST00000604367 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
CCDC12-211ENST00000604367 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.07
CCDC12-211ENST00000604367 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
CCDC12-211ENST00000604367 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
CCDC12-211ENST00000604367 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
CCDC12-211ENST00000604367 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
CCDC12-211ENST00000604367 FOXD1Q16676 465 aa21.64■■□□□ 1.05
CCDC12-211ENST00000604367 ABCC2Q92887 1545 aa21.63■■□□□ 1.05
CCDC12-211ENST00000604367 NCOA1Q15788 1441 aa21.63■■□□□ 1.05
CCDC12-211ENST00000604367 CROCC2H7BZ55 1655 aa21.6■■□□□ 1.05
CCDC12-211ENST00000604367 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCDC12-211ENST00000604367 ADGBQ8N7X0 1667 aa21.59■■□□□ 1.05
CCDC12-211ENST00000604367 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
CCDC12-211ENST00000604367 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.04
CCDC12-211ENST00000604367 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
CCDC12-211ENST00000604367 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
CCDC12-211ENST00000604367 ADGRL2O95490 1459 aa21.56■■□□□ 1.04
CCDC12-211ENST00000604367 TSPY4P0CV99 314 aa21.56■■□□□ 1.04
CCDC12-211ENST00000604367 TSPY10P0CW01 314 aa21.56■■□□□ 1.04
CCDC12-211ENST00000604367 YTHDC1Q96MU7 727 aaKnown RBP21.55■■□□□ 1.04
CCDC12-211ENST00000604367 CDC42BPBQ9Y5S2 1711 aa21.54■■□□□ 1.04
CCDC12-211ENST00000604367 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
CCDC12-211ENST00000604367 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
CCDC12-211ENST00000604367 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
CCDC12-211ENST00000604367 PREX2Q70Z35 1606 aa21.53■■□□□ 1.04
CCDC12-211ENST00000604367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCDC12-211ENST00000604367 SAMD9LQ8IVG5 1584 aa21.51■■□□□ 1.03
CCDC12-211ENST00000604367 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
CCDC12-211ENST00000604367 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
CCDC12-211ENST00000604367 ZCCHC11Q5TAX3 1644 aaKnown RBP21.5■■□□□ 1.03
CCDC12-211ENST00000604367 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
CCDC12-211ENST00000604367 MBD5Q9P267 1494 aa21.49■■□□□ 1.03
CCDC12-211ENST00000604367 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
CCDC12-211ENST00000604367 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
CCDC12-211ENST00000604367 UHRF1BP1LA0JNW5 1464 aa21.47■■□□□ 1.03
CCDC12-211ENST00000604367 PZPP20742 1482 aa21.47■■□□□ 1.03
CCDC12-211ENST00000604367 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
CCDC12-211ENST00000604367 ARHGEF5Q12774 1597 aa21.46■■□□□ 1.03
CCDC12-211ENST00000604367 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
CCDC12-211ENST00000604367 L3MBTL2Q969R5 705 aa21.45■■□□□ 1.02
CCDC12-211ENST00000604367 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
CCDC12-211ENST00000604367 SYCP2Q9BX26 1530 aa21.44■■□□□ 1.02
CCDC12-211ENST00000604367 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
CCDC12-211ENST00000604367 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
CCDC12-211ENST00000604367 RSPH4AQ5TD94 716 aa21.41■■□□□ 1.02
CCDC12-211ENST00000604367 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
CCDC12-211ENST00000604367 PKD2Q13563 968 aa21.41■■□□□ 1.02
CCDC12-211ENST00000604367 NUP155O75694 1391 aa21.41■■□□□ 1.02
CCDC12-211ENST00000604367 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
CCDC12-211ENST00000604367 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
CCDC12-211ENST00000604367 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
CCDC12-211ENST00000604367 PLCH2O75038 1416 aa21.36■■□□□ 1.01
CCDC12-211ENST00000604367 EFCAB2Q5VUJ9 269 aa21.34■■□□□ 1.01
CCDC12-211ENST00000604367 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
CCDC12-211ENST00000604367 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
CCDC12-211ENST00000604367 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
CCDC12-211ENST00000604367 NBPF8Q3BBV2 869 aa21.29■■□□□ 1
CCDC12-211ENST00000604367 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
CCDC12-211ENST00000604367 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
CCDC12-211ENST00000604367 MAST1Q9Y2H9 1570 aa21.28■■□□□ 1
CCDC12-211ENST00000604367 KDM5DQ9BY66 1539 aa21.26■□□□□ 0.99
CCDC12-211ENST00000604367 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC12-211ENST00000604367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■■□□ 15.5
CCDC12-211ENST00000604367 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
CCDC12-211ENST00000604367 ABCC1P33527 1531 aa21.24■□□□□ 0.99
CCDC12-211ENST00000604367 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
CCDC12-211ENST00000604367 AFAP1Q8N556 730 aa21.22■□□□□ 0.99
CCDC12-211ENST00000604367 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
CCDC12-211ENST00000604367 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
CCDC12-211ENST00000604367 PLXNC1O60486 1568 aa21.21■□□□□ 0.99
CCDC12-211ENST00000604367 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
CCDC12-211ENST00000604367 NPM1P06748 294 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC12-211ENST00000604367 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
CCDC12-211ENST00000604367 DUOX2Q9NRD8 1548 aa21.17■□□□□ 0.98
CCDC12-211ENST00000604367 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
CCDC12-211ENST00000604367 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
CCDC12-211ENST00000604367 FANCAO15360 1455 aa21.17■□□□□ 0.98
CCDC12-211ENST00000604367 ARAP3Q8WWN8 1544 aa21.17■□□□□ 0.98
CCDC12-211ENST00000604367 ANP32CO43423 234 aa21.15■□□□□ 0.98
CCDC12-211ENST00000604367 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
CCDC12-211ENST00000604367 UNC13BO14795 1591 aa21.15■□□□□ 0.98
CCDC12-211ENST00000604367 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
CCDC12-211ENST00000604367 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
CCDC12-211ENST00000604367 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
CCDC12-211ENST00000604367 C11orf95C9JLR9 678 aaPredicted RBP21.11■□□□□ 0.97
CCDC12-211ENST00000604367 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
CCDC12-211ENST00000604367 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
CCDC12-211ENST00000604367 DCAF11Q8TEB1 546 aa21.09■□□□□ 0.97
CCDC12-211ENST00000604367 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
CCDC12-211ENST00000604367 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.97
CCDC12-211ENST00000604367 IQGAP3Q86VI3 1631 aa21.08■□□□□ 0.97
CCDC12-211ENST00000604367 RTEL1-TNFRSF6BF6WH68 1400 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms