RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
NOLC1-208ENST00000603946 MLECQ14165 292 aa12.23□□□□□ -0.45
NOLC1-208ENST00000603946 TSPY4P0CV99 314 aa12.22□□□□□ -0.45
NOLC1-208ENST00000603946 TSPY10P0CW01 314 aa12.22□□□□□ -0.45
NOLC1-208ENST00000603946 EHBP1L1Q8N3D4 1523 aa12.22□□□□□ -0.45
NOLC1-208ENST00000603946 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
NOLC1-208ENST00000603946 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
NOLC1-208ENST00000603946 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
NOLC1-208ENST00000603946 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
NOLC1-208ENST00000603946 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
NOLC1-208ENST00000603946 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
NOLC1-208ENST00000603946 FOXD1Q16676 465 aa12.18□□□□□ -0.46
NOLC1-208ENST00000603946 FANCAO15360 1455 aa12.18□□□□□ -0.46
NOLC1-208ENST00000603946 TRAPPC8Q9Y2L5 1435 aa12.17□□□□□ -0.46
NOLC1-208ENST00000603946 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
NOLC1-208ENST00000603946 PLCH2O75038 1416 aa12.17□□□□□ -0.46
NOLC1-208ENST00000603946 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
NOLC1-208ENST00000603946 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
NOLC1-208ENST00000603946 GGT6Q6P531 493 aa12.15□□□□□ -0.47
NOLC1-208ENST00000603946 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.47
NOLC1-208ENST00000603946 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
NOLC1-208ENST00000603946 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
NOLC1-208ENST00000603946 AKNAQ7Z591 1439 aa12.14□□□□□ -0.47
NOLC1-208ENST00000603946 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
NOLC1-208ENST00000603946 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
NOLC1-208ENST00000603946 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
NOLC1-208ENST00000603946 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
NOLC1-208ENST00000603946 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
NOLC1-208ENST00000603946 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
NOLC1-208ENST00000603946 CDC42BPAQ5VT25 1732 aa12.12□□□□□ -0.47
NOLC1-208ENST00000603946 ABCC5O15440 1437 aa12.12□□□□□ -0.47
NOLC1-208ENST00000603946 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
NOLC1-208ENST00000603946 KIF3BO15066 747 aa12.11□□□□□ -0.47
NOLC1-208ENST00000603946 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
NOLC1-208ENST00000603946 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
NOLC1-208ENST00000603946 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
NOLC1-208ENST00000603946 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
NOLC1-208ENST00000603946 DAPK1P53355 1430 aa12.08□□□□□ -0.48
NOLC1-208ENST00000603946 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
NOLC1-208ENST00000603946 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
NOLC1-208ENST00000603946 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
NOLC1-208ENST00000603946 YEATS2Q9ULM3 1422 aa12.06□□□□□ -0.48
NOLC1-208ENST00000603946 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
NOLC1-208ENST00000603946 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
NOLC1-208ENST00000603946 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
NOLC1-208ENST00000603946 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
NOLC1-208ENST00000603946 SIN3AQ96ST3 1273 aa12.05□□□□□ -0.48
NOLC1-208ENST00000603946 KIF15Q9NS87 1388 aa12.04□□□□□ -0.48
NOLC1-208ENST00000603946 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
NOLC1-208ENST00000603946 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.48
NOLC1-208ENST00000603946 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
NOLC1-208ENST00000603946 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
NOLC1-208ENST00000603946 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
NOLC1-208ENST00000603946 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
NOLC1-208ENST00000603946 KDM6BO15054 1643 aa12□□□□□ -0.49
NOLC1-208ENST00000603946 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
NOLC1-208ENST00000603946 CCDC141Q6ZP82 1450 aa12□□□□□ -0.49
NOLC1-208ENST00000603946 PLEKHH2Q8IVE3 1493 aa12□□□□□ -0.49
NOLC1-208ENST00000603946 NAIPQ13075 1403 aa12□□□□□ -0.49
NOLC1-208ENST00000603946 NUP155O75694 1391 aa11.99□□□□□ -0.49
NOLC1-208ENST00000603946 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
NOLC1-208ENST00000603946 TCOF1Q13428 1488 aaKnown RBP11.98□□□□□ -0.49
NOLC1-208ENST00000603946 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
NOLC1-208ENST00000603946 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
NOLC1-208ENST00000603946 ANKRD50Q9ULJ7 1429 aa11.98□□□□□ -0.49
NOLC1-208ENST00000603946 ABCC1P33527 1531 aa11.98□□□□□ -0.49
NOLC1-208ENST00000603946 PKD2Q13563 968 aa11.97□□□□□ -0.49
NOLC1-208ENST00000603946 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
NOLC1-208ENST00000603946 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.49
NOLC1-208ENST00000603946 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.49
NOLC1-208ENST00000603946 KIAA1107Q9UPP5 1409 aa11.96□□□□□ -0.5
NOLC1-208ENST00000603946 RGL3Q3MIN7 710 aa11.96□□□□□ -0.5
NOLC1-208ENST00000603946 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
NOLC1-208ENST00000603946 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
NOLC1-208ENST00000603946 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
NOLC1-208ENST00000603946 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
NOLC1-208ENST00000603946 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
NOLC1-208ENST00000603946 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
NOLC1-208ENST00000603946 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
NOLC1-208ENST00000603946 GLI2P10070 1586 aa11.93□□□□□ -0.5
NOLC1-208ENST00000603946 NEO1Q92859 1461 aa11.93□□□□□ -0.5
NOLC1-208ENST00000603946 ESF1Q9H501 851 aaKnown RBP11.93□□□□□ -0.5
NOLC1-208ENST00000603946 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
NOLC1-208ENST00000603946 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
NOLC1-208ENST00000603946 HFM1A2PYH4 1435 aa11.92□□□□□ -0.5
NOLC1-208ENST00000603946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
NOLC1-208ENST00000603946 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
NOLC1-208ENST00000603946 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
NOLC1-208ENST00000603946 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.51
NOLC1-208ENST00000603946 DHX29Q7Z478 1369 aaKnown RBP11.89□□□□□ -0.51
NOLC1-208ENST00000603946 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
NOLC1-208ENST00000603946 A2MP01023 1474 aa11.88□□□□□ -0.51
NOLC1-208ENST00000603946 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
NOLC1-208ENST00000603946 ZFYVE16Q7Z3T8 1539 aa11.87□□□□□ -0.51
NOLC1-208ENST00000603946 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
NOLC1-208ENST00000603946 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
NOLC1-208ENST00000603946 ROCK1Q13464 1354 aa11.86□□□□□ -0.51
NOLC1-208ENST00000603946 ARAP3Q8WWN8 1544 aa11.85□□□□□ -0.51
NOLC1-208ENST00000603946 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
NOLC1-208ENST00000603946 RICTORQ6R327 1708 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms