RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 CDC42BPAQ5VT25 1732 aa33.02■■■□□ 2.88
PPFIA3-211ENST00000602848 DHX57Q6P158 1386 aaKnown RBP33■■■□□ 2.87
PPFIA3-211ENST00000602848 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
PPFIA3-211ENST00000602848 CAMSAP2Q08AD1 1489 aa32.98■■■□□ 2.87
PPFIA3-211ENST00000602848 DAPK1P53355 1430 aa32.95■■■□□ 2.87
PPFIA3-211ENST00000602848 ASXL2Q76L83 1435 aa32.94■■■□□ 2.86
PPFIA3-211ENST00000602848 ROCK1Q13464 1354 aa32.93■■■□□ 2.86
PPFIA3-211ENST00000602848 ZNF644Q9H582 1327 aaPredicted RBP32.92■■■□□ 2.86
PPFIA3-211ENST00000602848 ABCC5O15440 1437 aa32.92■■■□□ 2.86
PPFIA3-211ENST00000602848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.91■■■□□ 2.86
PPFIA3-211ENST00000602848 NAIPQ13075 1403 aa32.91■■■□□ 2.86
PPFIA3-211ENST00000602848 ACIN1Q9UKV3 1341 aaKnown RBP32.91■■■□□ 2.86
PPFIA3-211ENST00000602848 PREX2Q70Z35 1606 aa32.91■■■□□ 2.86
PPFIA3-211ENST00000602848 GCC2Q8IWJ2 1684 aa32.85■■■□□ 2.85
PPFIA3-211ENST00000602848 WDR7Q9Y4E6 1490 aa32.84■■■□□ 2.85
PPFIA3-211ENST00000602848 TTC37Q6PGP7 1564 aa32.84■■■□□ 2.85
PPFIA3-211ENST00000602848 ZNF777Q9ULD5 760 aaPredicted RBP32.84■■■□□ 2.85
PPFIA3-211ENST00000602848 KIF13AQ9H1H9 1805 aa32.83■■■□□ 2.85
PPFIA3-211ENST00000602848 DIP2BQ9P265 1576 aa32.83■■■□□ 2.85
PPFIA3-211ENST00000602848 CDC42BPBQ9Y5S2 1711 aa32.83■■■□□ 2.85
PPFIA3-211ENST00000602848 MYO5CQ9NQX4 1742 aa32.82■■■□□ 2.84
PPFIA3-211ENST00000602848 RSPH4AQ5TD94 716 aa32.81■■■□□ 2.84
PPFIA3-211ENST00000602848 KCNH8Q96L42 1107 aa32.8■■■□□ 2.84
PPFIA3-211ENST00000602848 CHIC2Q9UKJ5 165 aa32.79■■■□□ 2.84
PPFIA3-211ENST00000602848 ARHGEF5Q12774 1597 aa32.79■■■□□ 2.84
PPFIA3-211ENST00000602848 PLCH2O75038 1416 aa32.78■■■□□ 2.84
PPFIA3-211ENST00000602848 CROCC2H7BZ55 1655 aa32.78■■■□□ 2.84
PPFIA3-211ENST00000602848 SHANK2Q9UPX8 1470 aa32.77■■■□□ 2.84
PPFIA3-211ENST00000602848 ADGRL2O95490 1459 aa32.77■■■□□ 2.84
PPFIA3-211ENST00000602848 PLEKHH2Q8IVE3 1493 aa32.77■■■□□ 2.84
PPFIA3-211ENST00000602848 ARAP3Q8WWN8 1544 aa32.75■■■□□ 2.83
PPFIA3-211ENST00000602848 TRHP20396 242 aaPredicted RBP32.75■■■□□ 2.83
PPFIA3-211ENST00000602848 RRP7BPQ9NSQ0 103 aa32.75■■■□□ 2.83
PPFIA3-211ENST00000602848 ADGBQ8N7X0 1667 aa32.74■■■□□ 2.83
PPFIA3-211ENST00000602848 ARHGAP5Q13017 1502 aa32.74■■■□□ 2.83
PPFIA3-211ENST00000602848 SAMD9LQ8IVG5 1584 aa32.73■■■□□ 2.83
PPFIA3-211ENST00000602848 GLI2P10070 1586 aa32.72■■■□□ 2.83
PPFIA3-211ENST00000602848 KIAA1107Q9UPP5 1409 aa32.72■■■□□ 2.83
PPFIA3-211ENST00000602848 MBD5Q9P267 1494 aa32.7■■■□□ 2.83
PPFIA3-211ENST00000602848 FAM69CQ0P6D2 419 aa32.69■■■□□ 2.82
PPFIA3-211ENST00000602848 NCOA1Q15788 1441 aa32.69■■■□□ 2.82
PPFIA3-211ENST00000602848 ANKRD30AQ9BXX3 1397 aa32.68■■■□□ 2.82
PPFIA3-211ENST00000602848 EFCAB2Q5VUJ9 269 aa32.68■■■□□ 2.82
PPFIA3-211ENST00000602848 TSPY4P0CV99 314 aa32.67■■■□□ 2.82
PPFIA3-211ENST00000602848 TSPY10P0CW01 314 aa32.67■■■□□ 2.82
PPFIA3-211ENST00000602848 ABCA9Q8IUA7 1624 aa32.66■■■□□ 2.82
PPFIA3-211ENST00000602848 CCDC141Q6ZP82 1450 aa32.65■■■□□ 2.82
PPFIA3-211ENST00000602848 HNRNPMP52272 730 aaKnown RBP eCLIP32.62■■■□□ 2.81
PPFIA3-211ENST00000602848 C9orf84Q5VXU9 1444 aa32.62■■■□□ 2.81
PPFIA3-211ENST00000602848 MAP3K4Q9Y6R4 1608 aa32.6■■■□□ 2.81
PPFIA3-211ENST00000602848 MAST1Q9Y2H9 1570 aa32.57■■■□□ 2.8
PPFIA3-211ENST00000602848 SYCP2Q9BX26 1530 aa32.56■■■□□ 2.8
PPFIA3-211ENST00000602848 KDM6BO15054 1643 aa32.55■■■□□ 2.8
PPFIA3-211ENST00000602848 PPRC1Q5VV67 1664 aaKnown RBP32.54■■■□□ 2.8
PPFIA3-211ENST00000602848 TSPOAP1O95153 1857 aa32.52■■■□□ 2.8
PPFIA3-211ENST00000602848 ABCC1P33527 1531 aa32.52■■■□□ 2.8
PPFIA3-211ENST00000602848 TIMELESSQ9UNS1 1208 aa32.5■■■□□ 2.79
PPFIA3-211ENST00000602848 TRIM52Q96A61 297 aa32.48■■■□□ 2.79
PPFIA3-211ENST00000602848 CD109Q6YHK3 1445 aa32.47■■■□□ 2.79
PPFIA3-211ENST00000602848 ANKRD50Q9ULJ7 1429 aa32.47■■■□□ 2.79
PPFIA3-211ENST00000602848 ARHGEF12Q9NZN5 1544 aa32.46■■■□□ 2.79
PPFIA3-211ENST00000602848 FANCAO15360 1455 aa32.45■■■□□ 2.78
PPFIA3-211ENST00000602848 KIF15Q9NS87 1388 aa32.43■■■□□ 2.78
PPFIA3-211ENST00000602848 PLXNC1O60486 1568 aa32.41■■■□□ 2.78
PPFIA3-211ENST00000602848 MPHOSPH9Q99550 1183 aa32.4■■■□□ 2.78
PPFIA3-211ENST00000602848 RTEL1-TNFRSF6BF6WH68 1400 aa32.37■■■□□ 2.77
PPFIA3-211ENST00000602848 CFAP74Q9C0B2 1584 aa32.37■■■□□ 2.77
PPFIA3-211ENST00000602848 TRAPPC8Q9Y2L5 1435 aa32.34■■■□□ 2.77
PPFIA3-211ENST00000602848 DENND4BO75064 1496 aaPredicted RBP32.32■■■□□ 2.77
PPFIA3-211ENST00000602848 TEX14Q8IWB6 1497 aa32.32■■■□□ 2.76
PPFIA3-211ENST00000602848 ADGRL1O94910 1474 aa32.31■■■□□ 2.76
PPFIA3-211ENST00000602848 SIN3AQ96ST3 1273 aa32.3■■■□□ 2.76
PPFIA3-211ENST00000602848 DUOX2Q9NRD8 1548 aa32.29■■■□□ 2.76
PPFIA3-211ENST00000602848 KDM5DQ9BY66 1539 aa32.29■■■□□ 2.76
PPFIA3-211ENST00000602848 SCAPERQ9BY12 1400 aa32.28■■■□□ 2.76
PPFIA3-211ENST00000602848 SPAG9O60271 1321 aaKnown RBP32.28■■■□□ 2.76
PPFIA3-211ENST00000602848 PZPP20742 1482 aa32.27■■■□□ 2.76
PPFIA3-211ENST00000602848 SLC4A1APQ9BWU0 796 aaKnown RBP32.26■■■□□ 2.76
PPFIA3-211ENST00000602848 NEUROD1Q13562 356 aa32.25■■■□□ 2.75
PPFIA3-211ENST00000602848 NEO1Q92859 1461 aa32.24■■■□□ 2.75
PPFIA3-211ENST00000602848 ERBINQ96RT1 1412 aa32.23■■■□□ 2.75
PPFIA3-211ENST00000602848 AFAP1Q8N556 730 aa32.21■■■□□ 2.75
PPFIA3-211ENST00000602848 ZFYVE16Q7Z3T8 1539 aa32.2■■■□□ 2.74
PPFIA3-211ENST00000602848 NUP155O75694 1391 aa32.19■■■□□ 2.74
PPFIA3-211ENST00000602848 COL17A1Q9UMD9 1497 aaPredicted RBP32.19■■■□□ 2.74
PPFIA3-211ENST00000602848 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
PPFIA3-211ENST00000602848 INO80Q9ULG1 1556 aaPredicted RBP32.18■■■□□ 2.74
PPFIA3-211ENST00000602848 ZNF518AQ6AHZ1 1483 aa32.18■■■□□ 2.74
PPFIA3-211ENST00000602848 TONSLQ96HA7 1378 aa32.16■■■□□ 2.74
PPFIA3-211ENST00000602848 UNC13BO14795 1591 aa32.15■■■□□ 2.74
PPFIA3-211ENST00000602848 ATP7AQ04656 1500 aa32.15■■■□□ 2.74
PPFIA3-211ENST00000602848 ZNF316A6NFI3 1004 aaPredicted RBP32.15■■■□□ 2.74
PPFIA3-211ENST00000602848 PPP1R15AO75807 674 aaPredicted RBP32.11■■■□□ 2.73
PPFIA3-211ENST00000602848 POGZQ7Z3K3 1410 aa32.1■■■□□ 2.73
PPFIA3-211ENST00000602848 KDM5CP41229 1560 aa32.08■■■□□ 2.73
PPFIA3-211ENST00000602848 PKD2Q13563 968 aa32.08■■■□□ 2.73
PPFIA3-211ENST00000602848 MAGI2Q86UL8 1455 aa32.07■■■□□ 2.72
PPFIA3-211ENST00000602848 RPRD2Q5VT52 1461 aaKnown RBP32.05■■■□□ 2.72
PPFIA3-211ENST00000602848 FAM135AQ9P2D6 1515 aa32.05■■■□□ 2.72
PPFIA3-211ENST00000602848 MLH3Q9UHC1 1453 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms