RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 KIF14Q15058 1648 aa13.54□□□□□ -0.24
HCG18-242ENST00000602319 E9PCH4 1651 aa13.53□□□□□ -0.24
HCG18-242ENST00000602319 NESP48681 1621 aa13.53□□□□□ -0.24
HCG18-242ENST00000602319 DHX29Q7Z478 1369 aaKnown RBP13.53□□□□□ -0.24
HCG18-242ENST00000602319 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
HCG18-242ENST00000602319 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
HCG18-242ENST00000602319 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
HCG18-242ENST00000602319 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.24
HCG18-242ENST00000602319 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
HCG18-242ENST00000602319 KDM5CP41229 1560 aa13.52□□□□□ -0.25
HCG18-242ENST00000602319 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
HCG18-242ENST00000602319 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
HCG18-242ENST00000602319 IPO9Q96P70 1041 aaKnown RBP13.5□□□□□ -0.25
HCG18-242ENST00000602319 P3H3Q8IVL6 736 aa13.49□□□□□ -0.25
HCG18-242ENST00000602319 ADGBQ8N7X0 1667 aa13.49□□□□□ -0.25
HCG18-242ENST00000602319 WDR62O43379 1518 aa13.48□□□□□ -0.25
HCG18-242ENST00000602319 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
HCG18-242ENST00000602319 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
HCG18-242ENST00000602319 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
HCG18-242ENST00000602319 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.25
HCG18-242ENST00000602319 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
HCG18-242ENST00000602319 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
HCG18-242ENST00000602319 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
HCG18-242ENST00000602319 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
HCG18-242ENST00000602319 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
HCG18-242ENST00000602319 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
HCG18-242ENST00000602319 DAPK1P53355 1430 aa13.43□□□□□ -0.26
HCG18-242ENST00000602319 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
HCG18-242ENST00000602319 PZPP20742 1482 aa13.42□□□□□ -0.26
HCG18-242ENST00000602319 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
HCG18-242ENST00000602319 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
HCG18-242ENST00000602319 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
HCG18-242ENST00000602319 UHRF1BP1Q6BDS2 1440 aa13.4□□□□□ -0.26
HCG18-242ENST00000602319 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
HCG18-242ENST00000602319 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
HCG18-242ENST00000602319 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
HCG18-242ENST00000602319 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
HCG18-242ENST00000602319 IQGAP2Q13576 1575 aa13.38□□□□□ -0.27
HCG18-242ENST00000602319 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
HCG18-242ENST00000602319 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
HCG18-242ENST00000602319 GAPVD1Q14C86 1478 aa13.37□□□□□ -0.27
HCG18-242ENST00000602319 ABCC5O15440 1437 aa13.37□□□□□ -0.27
HCG18-242ENST00000602319 NBR1Q14596 966 aa13.37□□□□□ -0.27
HCG18-242ENST00000602319 ADCY10Q96PN6 1610 aa13.37□□□□□ -0.27
HCG18-242ENST00000602319 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
HCG18-242ENST00000602319 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
HCG18-242ENST00000602319 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
HCG18-242ENST00000602319 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
HCG18-242ENST00000602319 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
HCG18-242ENST00000602319 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
HCG18-242ENST00000602319 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
HCG18-242ENST00000602319 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
HCG18-242ENST00000602319 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
HCG18-242ENST00000602319 INSRP06213 1382 aa13.34□□□□□ -0.27
HCG18-242ENST00000602319 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
HCG18-242ENST00000602319 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
HCG18-242ENST00000602319 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.27
HCG18-242ENST00000602319 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
HCG18-242ENST00000602319 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
HCG18-242ENST00000602319 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
HCG18-242ENST00000602319 MS4A1P11836 297 aa13.32□□□□□ -0.28
HCG18-242ENST00000602319 RTL5Q5HYW3 569 aaPredicted RBP13.32□□□□□ -0.28
HCG18-242ENST00000602319 USP47Q96K76 1375 aa13.31□□□□□ -0.28
HCG18-242ENST00000602319 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
HCG18-242ENST00000602319 LAMC1P11047 1609 aa13.3□□□□□ -0.28
HCG18-242ENST00000602319 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
HCG18-242ENST00000602319 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
HCG18-242ENST00000602319 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
HCG18-242ENST00000602319 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
HCG18-242ENST00000602319 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
HCG18-242ENST00000602319 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
HCG18-242ENST00000602319 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
HCG18-242ENST00000602319 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.28
HCG18-242ENST00000602319 FOXD1Q16676 465 aa13.26□□□□□ -0.29
HCG18-242ENST00000602319 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
HCG18-242ENST00000602319 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
HCG18-242ENST00000602319 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
HCG18-242ENST00000602319 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
HCG18-242ENST00000602319 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
HCG18-242ENST00000602319 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
HCG18-242ENST00000602319 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
HCG18-242ENST00000602319 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
HCG18-242ENST00000602319 PDE4AP27815 886 aa13.24□□□□□ -0.29
HCG18-242ENST00000602319 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
HCG18-242ENST00000602319 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
HCG18-242ENST00000602319 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
HCG18-242ENST00000602319 PARD3Q8TEW0 1356 aa13.23□□□□□ -0.29
HCG18-242ENST00000602319 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
HCG18-242ENST00000602319 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
HCG18-242ENST00000602319 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
HCG18-242ENST00000602319 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.29
HCG18-242ENST00000602319 DISP1Q96F81 1524 aa13.21□□□□□ -0.29
HCG18-242ENST00000602319 RALBP1Q15311 655 aa13.21□□□□□ -0.3
HCG18-242ENST00000602319 PTPRGP23470 1445 aa13.2□□□□□ -0.3
HCG18-242ENST00000602319 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
HCG18-242ENST00000602319 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
HCG18-242ENST00000602319 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
HCG18-242ENST00000602319 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
HCG18-242ENST00000602319 NEFMP07197 916 aa13.18□□□□□ -0.3
HCG18-242ENST00000602319 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms