RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
SMG9-212ENST00000601925 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
SMG9-212ENST00000601925 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
SMG9-212ENST00000601925 KIF14Q15058 1648 aa21.4■■□□□ 1.02
SMG9-212ENST00000601925 TROQ12816 1431 aaPredicted RBP21.4■■□□□ 1.02
SMG9-212ENST00000601925 MAGI2Q86UL8 1455 aa21.39■■□□□ 1.02
SMG9-212ENST00000601925 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.01
SMG9-212ENST00000601925 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
SMG9-212ENST00000601925 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
SMG9-212ENST00000601925 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
SMG9-212ENST00000601925 EFCAB2Q5VUJ9 269 aa21.37■■□□□ 1.01
SMG9-212ENST00000601925 SOCS7O14512 581 aa21.34■■□□□ 1.01
SMG9-212ENST00000601925 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
SMG9-212ENST00000601925 PCF11O94913 1555 aaKnown RBP21.31■■□□□ 1
SMG9-212ENST00000601925 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
SMG9-212ENST00000601925 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
SMG9-212ENST00000601925 ATP10AO60312 1499 aa21.28■■□□□ 1
SMG9-212ENST00000601925 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
SMG9-212ENST00000601925 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
SMG9-212ENST00000601925 AFAP1Q8N556 730 aa21.27■■□□□ 1
SMG9-212ENST00000601925 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
SMG9-212ENST00000601925 KDM5CP41229 1560 aa21.26■□□□□ 0.99
SMG9-212ENST00000601925 C9orf84Q5VXU9 1444 aa21.24■□□□□ 0.99
SMG9-212ENST00000601925 MLECQ14165 292 aa21.24■□□□□ 0.99
SMG9-212ENST00000601925 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
SMG9-212ENST00000601925 PREX2Q70Z35 1606 aa21.22■□□□□ 0.99
SMG9-212ENST00000601925 ARHGEF12Q9NZN5 1544 aa21.21■□□□□ 0.99
SMG9-212ENST00000601925 FER1L4A9Z1Z3 1794 aa21.2■□□□□ 0.98
SMG9-212ENST00000601925 TRAPPC8Q9Y2L5 1435 aa21.18■□□□□ 0.98
SMG9-212ENST00000601925 MLH3Q9UHC1 1453 aa21.18■□□□□ 0.98
SMG9-212ENST00000601925 ABCC1P33527 1531 aa21.18■□□□□ 0.98
SMG9-212ENST00000601925 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
SMG9-212ENST00000601925 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
SMG9-212ENST00000601925 DIP2CQ9Y2E4 1556 aa21.17■□□□□ 0.98
SMG9-212ENST00000601925 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
SMG9-212ENST00000601925 REREQ9P2R6 1566 aa21.14■□□□□ 0.98
SMG9-212ENST00000601925 HSPA2P54652 639 aa21.14■□□□□ 0.97
SMG9-212ENST00000601925 ABCA6Q8N139 1617 aa21.14■□□□□ 0.97
SMG9-212ENST00000601925 ITSN2Q9NZM3 1697 aa21.13■□□□□ 0.97
SMG9-212ENST00000601925 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
SMG9-212ENST00000601925 CEBPAP49715 358 aaPredicted RBP21.1■□□□□ 0.97
SMG9-212ENST00000601925 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
SMG9-212ENST00000601925 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
SMG9-212ENST00000601925 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
SMG9-212ENST00000601925 SAMD9LQ8IVG5 1584 aa21.08■□□□□ 0.97
SMG9-212ENST00000601925 AGLP35573 1532 aa21.08■□□□□ 0.96
SMG9-212ENST00000601925 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
SMG9-212ENST00000601925 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
SMG9-212ENST00000601925 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMG9-212ENST00000601925 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
SMG9-212ENST00000601925 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.96
SMG9-212ENST00000601925 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.96
SMG9-212ENST00000601925 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
SMG9-212ENST00000601925 CFDP1Q9UEE9 299 aaPredicted RBP21.01■□□□□ 0.95
SMG9-212ENST00000601925 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
SMG9-212ENST00000601925 APLP2Q06481 763 aa20.99■□□□□ 0.95
SMG9-212ENST00000601925 C3P01024 1663 aa20.99■□□□□ 0.95
SMG9-212ENST00000601925 SPAG9O60271 1321 aaKnown RBP20.98■□□□□ 0.95
SMG9-212ENST00000601925 PLEKHH2Q8IVE3 1493 aa20.97■□□□□ 0.95
SMG9-212ENST00000601925 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
SMG9-212ENST00000601925 UHRF1BP1Q6BDS2 1440 aa20.95■□□□□ 0.94
SMG9-212ENST00000601925 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
SMG9-212ENST00000601925 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
SMG9-212ENST00000601925 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
SMG9-212ENST00000601925 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
SMG9-212ENST00000601925 STRCQ7RTU9 1775 aa20.93■□□□□ 0.94
SMG9-212ENST00000601925 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
SMG9-212ENST00000601925 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
SMG9-212ENST00000601925 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
SMG9-212ENST00000601925 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
SMG9-212ENST00000601925 SUPT6HQ7KZ85 1726 aaKnown RBP20.9■□□□□ 0.94
SMG9-212ENST00000601925 MAP3K1Q13233 1512 aa20.9■□□□□ 0.94
SMG9-212ENST00000601925 DISP3Q9P2K9 1392 aa20.9■□□□□ 0.94
SMG9-212ENST00000601925 A2MP01023 1474 aa20.89■□□□□ 0.94
SMG9-212ENST00000601925 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
SMG9-212ENST00000601925 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
SMG9-212ENST00000601925 ZMYM3Q14202 1370 aa20.86■□□□□ 0.93
SMG9-212ENST00000601925 NPATQ14207 1427 aa20.85■□□□□ 0.93
SMG9-212ENST00000601925 NCOA2Q15596 1464 aa20.84■□□□□ 0.93
SMG9-212ENST00000601925 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
SMG9-212ENST00000601925 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.93
SMG9-212ENST00000601925 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
SMG9-212ENST00000601925 ADGBQ8N7X0 1667 aa20.82■□□□□ 0.92
SMG9-212ENST00000601925 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
SMG9-212ENST00000601925 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
SMG9-212ENST00000601925 GGT6Q6P531 493 aa20.8■□□□□ 0.92
SMG9-212ENST00000601925 PTPRTO14522 1441 aa20.79■□□□□ 0.92
SMG9-212ENST00000601925 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
SMG9-212ENST00000601925 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
SMG9-212ENST00000601925 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
SMG9-212ENST00000601925 SPATA31D1Q6ZQQ2 1576 aa20.77■□□□□ 0.92
SMG9-212ENST00000601925 CAMSAP2Q08AD1 1489 aa20.77■□□□□ 0.92
SMG9-212ENST00000601925 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
SMG9-212ENST00000601925 CCDC141Q6ZP82 1450 aa20.76■□□□□ 0.91
SMG9-212ENST00000601925 RSPH4AQ5TD94 716 aa20.75■□□□□ 0.91
SMG9-212ENST00000601925 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
SMG9-212ENST00000601925 CAMSAP1Q5T5Y3 1602 aa20.73■□□□□ 0.91
SMG9-212ENST00000601925 ARHGEF5Q12774 1597 aa20.71■□□□□ 0.91
SMG9-212ENST00000601925 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
SMG9-212ENST00000601925 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms