RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ABCC9O60706 1549 aa15.33■□□□□ 0.05
SHANK2-218ENST00000601538 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.05
SHANK2-218ENST00000601538 TPM3P06753 285 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 APPP05067 770 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
SHANK2-218ENST00000601538 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
SHANK2-218ENST00000601538 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
SHANK2-218ENST00000601538 CLSTN1O94985 981 aa15.3■□□□□ 0.04
SHANK2-218ENST00000601538 ARID3AQ99856 593 aa15.3■□□□□ 0.04
SHANK2-218ENST00000601538 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
SHANK2-218ENST00000601538 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
SHANK2-218ENST00000601538 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
SHANK2-218ENST00000601538 TSPYL1Q9H0U9 437 aa15.27■□□□□ 0.04
SHANK2-218ENST00000601538 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.03
SHANK2-218ENST00000601538 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
SHANK2-218ENST00000601538 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SHANK2-218ENST00000601538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■□□□□ 10.6
SHANK2-218ENST00000601538 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-218ENST00000601538 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
SHANK2-218ENST00000601538 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
SHANK2-218ENST00000601538 CWC15Q9P013 229 aaKnown RBP15.23■□□□□ 0.03
SHANK2-218ENST00000601538 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
SHANK2-218ENST00000601538 HMMRO75330 724 aa15.22■□□□□ 0.03
SHANK2-218ENST00000601538 ARID3CA6NKF2 412 aa15.22■□□□□ 0.03
SHANK2-218ENST00000601538 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 ROCK2O75116 1388 aaKnown RBP15.21■□□□□ 0.03
SHANK2-218ENST00000601538 ATP6V1DQ9Y5K8 247 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 TPM1P09493 284 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
SHANK2-218ENST00000601538 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-218ENST00000601538 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHANK2-218ENST00000601538 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
SHANK2-218ENST00000601538 ACBD3Q9H3P7 528 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 A0A0G2JS52 829 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 CDR1P51861 262 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 ST18O60284 1047 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
SHANK2-218ENST00000601538 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 PPP1R15AO75807 674 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 GOLGA6L19H0YKK7 550 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 AK7Q96M32 723 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 NPHP1O15259 732 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 AAMPQ13685 434 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-218ENST00000601538 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
SHANK2-218ENST00000601538 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
SHANK2-218ENST00000601538 RDXP35241 583 aaKnown RBP15.11■□□□□ 0.01
SHANK2-218ENST00000601538 ZBTB7CA1YPR0 619 aa15.11■□□□□ 0.01
SHANK2-218ENST00000601538 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 IPO7O95373 1038 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
SHANK2-218ENST00000601538 EIF3AQ14152 1382 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
SHANK2-218ENST00000601538 RUFY1Q96T51 708 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 MRE11P49959 708 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 TMF1P82094 1093 aa15.06■□□□□ 0
SHANK2-218ENST00000601538 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
SHANK2-218ENST00000601538 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
SHANK2-218ENST00000601538 CCAR2Q8N163 923 aaKnown RBP15.05■□□□□ -0
SHANK2-218ENST00000601538 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
SHANK2-218ENST00000601538 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
SHANK2-218ENST00000601538 BECN2A8MW95 431 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 RASSF8Q8NHQ8 419 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 ANKRD20A12PQ8NF67 263 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
SHANK2-218ENST00000601538 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
SHANK2-218ENST00000601538 RALBP1Q15311 655 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
SHANK2-218ENST00000601538 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
SHANK2-218ENST00000601538 PDCL3Q9H2J4 239 aa15.03■□□□□ -0
SHANK2-218ENST00000601538 FAM161AQ3B820 660 aa15.03■□□□□ -0
SHANK2-218ENST00000601538 STK11IPQ8N1F8 1099 aa15.02■□□□□ -0
SHANK2-218ENST00000601538 FAM13BQ9NYF5 915 aa15.02■□□□□ -0
SHANK2-218ENST00000601538 CAVIN1Q6NZI2 390 aaKnown RBP15.02□□□□□ -0.01
SHANK2-218ENST00000601538 ERCC4Q92889 916 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-218ENST00000601538 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
SHANK2-218ENST00000601538 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms