RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
LTBP4-229ENST00000601032 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
LTBP4-229ENST00000601032 UBE2Q2Q8WVN8 375 aa24.03■■□□□ 1.44
LTBP4-229ENST00000601032 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
LTBP4-229ENST00000601032 ERICH6BQ5W0A0 696 aa24.01■■□□□ 1.43
LTBP4-229ENST00000601032 TCOF1Q13428 1488 aaKnown RBP23.98■■□□□ 1.43
LTBP4-229ENST00000601032 ATP10BO94823 1461 aa23.97■■□□□ 1.43
LTBP4-229ENST00000601032 SIN3AQ96ST3 1273 aa23.96■■□□□ 1.43
LTBP4-229ENST00000601032 KDM5BQ9UGL1 1544 aa23.96■■□□□ 1.43
LTBP4-229ENST00000601032 ZCCHC11Q5TAX3 1644 aaKnown RBP23.95■■□□□ 1.42
LTBP4-229ENST00000601032 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
LTBP4-229ENST00000601032 NAIPQ13075 1403 aa23.94■■□□□ 1.42
LTBP4-229ENST00000601032 ANO8Q9HCE9 1232 aaPredicted RBP23.93■■□□□ 1.42
LTBP4-229ENST00000601032 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
LTBP4-229ENST00000601032 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
LTBP4-229ENST00000601032 RRP7BPQ9NSQ0 103 aa23.87■■□□□ 1.41
LTBP4-229ENST00000601032 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
LTBP4-229ENST00000601032 KDM6BO15054 1643 aa23.85■■□□□ 1.41
LTBP4-229ENST00000601032 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
LTBP4-229ENST00000601032 ZNF644Q9H582 1327 aaPredicted RBP23.85■■□□□ 1.41
LTBP4-229ENST00000601032 RBM19Q9Y4C8 960 aaKnown RBP23.84■■□□□ 1.41
LTBP4-229ENST00000601032 KIF14Q15058 1648 aa23.82■■□□□ 1.4
LTBP4-229ENST00000601032 TROQ12816 1431 aaPredicted RBP23.81■■□□□ 1.4
LTBP4-229ENST00000601032 ASXL2Q76L83 1435 aa23.81■■□□□ 1.4
LTBP4-229ENST00000601032 GCC2Q8IWJ2 1684 aa23.8■■□□□ 1.4
LTBP4-229ENST00000601032 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
LTBP4-229ENST00000601032 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
LTBP4-229ENST00000601032 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
LTBP4-229ENST00000601032 ABCC5O15440 1437 aa23.75■■□□□ 1.39
LTBP4-229ENST00000601032 DAPK1P53355 1430 aa23.75■■□□□ 1.39
LTBP4-229ENST00000601032 KCNH8Q96L42 1107 aa23.74■■□□□ 1.39
LTBP4-229ENST00000601032 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
LTBP4-229ENST00000601032 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
LTBP4-229ENST00000601032 DENND4BO75064 1496 aaPredicted RBP23.73■■□□□ 1.39
LTBP4-229ENST00000601032 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
LTBP4-229ENST00000601032 AKNAQ7Z591 1439 aa23.71■■□□□ 1.39
LTBP4-229ENST00000601032 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
LTBP4-229ENST00000601032 DEKP35659 375 aaKnown RBP23.66■■□□□ 1.38
LTBP4-229ENST00000601032 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
LTBP4-229ENST00000601032 MSH5O43196 834 aa23.66■■□□□ 1.38
LTBP4-229ENST00000601032 EIF5BO60841 1220 aaKnown RBP23.66■■□□□ 1.38
LTBP4-229ENST00000601032 CFDP1Q9UEE9 299 aaPredicted RBP23.65■■□□□ 1.38
LTBP4-229ENST00000601032 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.37
LTBP4-229ENST00000601032 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
LTBP4-229ENST00000601032 CDC42BPAQ5VT25 1732 aa23.63■■□□□ 1.37
LTBP4-229ENST00000601032 TRIM52Q96A61 297 aa23.63■■□□□ 1.37
LTBP4-229ENST00000601032 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
LTBP4-229ENST00000601032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.62■■□□□ 1.371e-7■■□□□ 13.4
LTBP4-229ENST00000601032 TTC37Q6PGP7 1564 aa23.62■■□□□ 1.37
LTBP4-229ENST00000601032 ROCK1Q13464 1354 aa23.62■■□□□ 1.37
LTBP4-229ENST00000601032 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
LTBP4-229ENST00000601032 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
LTBP4-229ENST00000601032 KIF13AQ9H1H9 1805 aa23.58■■□□□ 1.37
LTBP4-229ENST00000601032 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.37
LTBP4-229ENST00000601032 FOXD1Q16676 465 aa23.57■■□□□ 1.36
LTBP4-229ENST00000601032 SALL2Q9Y467 1007 aaPredicted RBP23.57■■□□□ 1.36
LTBP4-229ENST00000601032 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
LTBP4-229ENST00000601032 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
LTBP4-229ENST00000601032 CROCC2H7BZ55 1655 aa23.56■■□□□ 1.36
LTBP4-229ENST00000601032 ABCA9Q8IUA7 1624 aa23.55■■□□□ 1.36
LTBP4-229ENST00000601032 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
LTBP4-229ENST00000601032 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-229ENST00000601032 ADGBQ8N7X0 1667 aa23.52■■□□□ 1.36
LTBP4-229ENST00000601032 GLI2P10070 1586 aa23.51■■□□□ 1.35
LTBP4-229ENST00000601032 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
LTBP4-229ENST00000601032 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-229ENST00000601032 MAP3K4Q9Y6R4 1608 aa23.49■■□□□ 1.35
LTBP4-229ENST00000601032 CD109Q6YHK3 1445 aa23.48■■□□□ 1.35
LTBP4-229ENST00000601032 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
LTBP4-229ENST00000601032 TSPOAP1O95153 1857 aa23.48■■□□□ 1.35
LTBP4-229ENST00000601032 ADGRL2O95490 1459 aa23.47■■□□□ 1.35
LTBP4-229ENST00000601032 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
LTBP4-229ENST00000601032 PREX2Q70Z35 1606 aa23.45■■□□□ 1.34
LTBP4-229ENST00000601032 PZPP20742 1482 aa23.44■■□□□ 1.34
LTBP4-229ENST00000601032 PLCH2O75038 1416 aa23.44■■□□□ 1.34
LTBP4-229ENST00000601032 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.34
LTBP4-229ENST00000601032 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
LTBP4-229ENST00000601032 ANKRD30BQ9BXX2 1392 aa23.41■■□□□ 1.34
LTBP4-229ENST00000601032 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
LTBP4-229ENST00000601032 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
LTBP4-229ENST00000601032 C9orf84Q5VXU9 1444 aa23.38■■□□□ 1.33
LTBP4-229ENST00000601032 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
LTBP4-229ENST00000601032 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
LTBP4-229ENST00000601032 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
LTBP4-229ENST00000601032 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
LTBP4-229ENST00000601032 FANCAO15360 1455 aa23.36■■□□□ 1.33
LTBP4-229ENST00000601032 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
LTBP4-229ENST00000601032 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
LTBP4-229ENST00000601032 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
LTBP4-229ENST00000601032 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
LTBP4-229ENST00000601032 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.33
LTBP4-229ENST00000601032 FKBP8Q14318 412 aa23.33■■□□□ 1.32
LTBP4-229ENST00000601032 EFCAB2Q5VUJ9 269 aa23.33■■□□□ 1.32
LTBP4-229ENST00000601032 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
LTBP4-229ENST00000601032 NEFLP07196 543 aa23.3■■□□□ 1.32
LTBP4-229ENST00000601032 PKNOX2Q96KN3 472 aa23.3■■□□□ 1.32
LTBP4-229ENST00000601032 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
LTBP4-229ENST00000601032 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
LTBP4-229ENST00000601032 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
LTBP4-229ENST00000601032 CCDC141Q6ZP82 1450 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms