RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 CAMSAP2Q08AD1 1489 aa22.66■■□□□ 1.22
VRK3-218ENST00000600031 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
VRK3-218ENST00000600031 CDC42BPBQ9Y5S2 1711 aa22.64■■□□□ 1.22
VRK3-218ENST00000600031 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
VRK3-218ENST00000600031 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
VRK3-218ENST00000600031 MYO5CQ9NQX4 1742 aa22.6■■□□□ 1.21
VRK3-218ENST00000600031 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
VRK3-218ENST00000600031 ABCC5O15440 1437 aa22.6■■□□□ 1.21
VRK3-218ENST00000600031 DAPK1P53355 1430 aa22.6■■□□□ 1.21
VRK3-218ENST00000600031 CHIC2Q9UKJ5 165 aa22.59■■□□□ 1.21
VRK3-218ENST00000600031 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
VRK3-218ENST00000600031 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
VRK3-218ENST00000600031 PLCH2O75038 1416 aa22.57■■□□□ 1.2
VRK3-218ENST00000600031 SAMD9LQ8IVG5 1584 aa22.56■■□□□ 1.2
VRK3-218ENST00000600031 HFM1A2PYH4 1435 aa22.54■■□□□ 1.2
VRK3-218ENST00000600031 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
VRK3-218ENST00000600031 NAIPQ13075 1403 aa22.52■■□□□ 1.2
VRK3-218ENST00000600031 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.2
VRK3-218ENST00000600031 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
VRK3-218ENST00000600031 MBD5Q9P267 1494 aa22.5■■□□□ 1.19
VRK3-218ENST00000600031 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
VRK3-218ENST00000600031 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
VRK3-218ENST00000600031 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
VRK3-218ENST00000600031 CROCC2H7BZ55 1655 aa22.48■■□□□ 1.19
VRK3-218ENST00000600031 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
VRK3-218ENST00000600031 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
VRK3-218ENST00000600031 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
VRK3-218ENST00000600031 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
VRK3-218ENST00000600031 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
VRK3-218ENST00000600031 GCC2Q8IWJ2 1684 aa22.44■■□□□ 1.18
VRK3-218ENST00000600031 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
VRK3-218ENST00000600031 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
VRK3-218ENST00000600031 ARHGEF12Q9NZN5 1544 aa22.43■■□□□ 1.18
VRK3-218ENST00000600031 CCDC141Q6ZP82 1450 aa22.42■■□□□ 1.18
VRK3-218ENST00000600031 SHANK2Q9UPX8 1470 aa22.42■■□□□ 1.18
VRK3-218ENST00000600031 RSPH4AQ5TD94 716 aa22.42■■□□□ 1.18
VRK3-218ENST00000600031 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
VRK3-218ENST00000600031 NCOA1Q15788 1441 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 C9orf84Q5VXU9 1444 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 FANCAO15360 1455 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
VRK3-218ENST00000600031 ABCC1P33527 1531 aa22.4■■□□□ 1.18
VRK3-218ENST00000600031 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
VRK3-218ENST00000600031 KDM6BO15054 1643 aa22.39■■□□□ 1.18
VRK3-218ENST00000600031 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
VRK3-218ENST00000600031 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
VRK3-218ENST00000600031 GLI2P10070 1586 aa22.32■■□□□ 1.16
VRK3-218ENST00000600031 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
VRK3-218ENST00000600031 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
VRK3-218ENST00000600031 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
VRK3-218ENST00000600031 MAP3K4Q9Y6R4 1608 aa22.3■■□□□ 1.16
VRK3-218ENST00000600031 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
VRK3-218ENST00000600031 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
VRK3-218ENST00000600031 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
VRK3-218ENST00000600031 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
VRK3-218ENST00000600031 KIF15Q9NS87 1388 aa22.28■■□□□ 1.16
VRK3-218ENST00000600031 CFAP74Q9C0B2 1584 aa22.27■■□□□ 1.15
VRK3-218ENST00000600031 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
VRK3-218ENST00000600031 TRIM52Q96A61 297 aa22.26■■□□□ 1.15
VRK3-218ENST00000600031 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
VRK3-218ENST00000600031 PLXNC1O60486 1568 aa22.23■■□□□ 1.15
VRK3-218ENST00000600031 NEO1Q92859 1461 aa22.22■■□□□ 1.15
VRK3-218ENST00000600031 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
VRK3-218ENST00000600031 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
VRK3-218ENST00000600031 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
VRK3-218ENST00000600031 DENND4BO75064 1496 aaPredicted RBP22.18■■□□□ 1.14
VRK3-218ENST00000600031 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
VRK3-218ENST00000600031 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
VRK3-218ENST00000600031 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
VRK3-218ENST00000600031 ZNF518AQ6AHZ1 1483 aa22.16■■□□□ 1.14
VRK3-218ENST00000600031 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
VRK3-218ENST00000600031 INO80Q9ULG1 1556 aaPredicted RBP22.16■■□□□ 1.14
VRK3-218ENST00000600031 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
VRK3-218ENST00000600031 ATP7AQ04656 1500 aa22.15■■□□□ 1.14
VRK3-218ENST00000600031 DUOX2Q9NRD8 1548 aa22.15■■□□□ 1.14
VRK3-218ENST00000600031 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.14
VRK3-218ENST00000600031 SIN3AQ96ST3 1273 aa22.12■■□□□ 1.13
VRK3-218ENST00000600031 MYT1LQ9UL68 1186 aa22.12■■□□□ 1.13
VRK3-218ENST00000600031 PZPP20742 1482 aa22.12■■□□□ 1.13
VRK3-218ENST00000600031 KDM5CP41229 1560 aa22.11■■□□□ 1.13
VRK3-218ENST00000600031 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
VRK3-218ENST00000600031 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
VRK3-218ENST00000600031 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
VRK3-218ENST00000600031 NUP155O75694 1391 aa22.09■■□□□ 1.13
VRK3-218ENST00000600031 ERBINQ96RT1 1412 aa22.09■■□□□ 1.13
VRK3-218ENST00000600031 FOXD1Q16676 465 aa22.08■■□□□ 1.13
VRK3-218ENST00000600031 TEX14Q8IWB6 1497 aa22.07■■□□□ 1.12
VRK3-218ENST00000600031 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
VRK3-218ENST00000600031 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
VRK3-218ENST00000600031 RICTORQ6R327 1708 aa22.06■■□□□ 1.12
VRK3-218ENST00000600031 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
VRK3-218ENST00000600031 HECW2Q9P2P5 1572 aa22.05■■□□□ 1.12
VRK3-218ENST00000600031 UNC13BO14795 1591 aa22.04■■□□□ 1.12
VRK3-218ENST00000600031 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
VRK3-218ENST00000600031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.01■■□□□ 1.11
VRK3-218ENST00000600031 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
VRK3-218ENST00000600031 PKD2Q13563 968 aa22.01■■□□□ 1.11
VRK3-218ENST00000600031 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms