RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ZFYVE16Q7Z3T8 1539 aa22.6■■□□□ 1.21
IRF3-225ENST00000600022 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
IRF3-225ENST00000600022 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
IRF3-225ENST00000600022 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
IRF3-225ENST00000600022 EFCAB2Q5VUJ9 269 aa22.57■■□□□ 1.2
IRF3-225ENST00000600022 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
IRF3-225ENST00000600022 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
IRF3-225ENST00000600022 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
IRF3-225ENST00000600022 KIF14Q15058 1648 aa22.55■■□□□ 1.2
IRF3-225ENST00000600022 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
IRF3-225ENST00000600022 CEBPAP49715 358 aaPredicted RBP22.52■■□□□ 1.2
IRF3-225ENST00000600022 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
IRF3-225ENST00000600022 ATP10AO60312 1499 aa22.49■■□□□ 1.19
IRF3-225ENST00000600022 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
IRF3-225ENST00000600022 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
IRF3-225ENST00000600022 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
IRF3-225ENST00000600022 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
IRF3-225ENST00000600022 C9orf84Q5VXU9 1444 aa22.43■■□□□ 1.18
IRF3-225ENST00000600022 FER1L4A9Z1Z3 1794 aa22.43■■□□□ 1.18
IRF3-225ENST00000600022 ARHGEF12Q9NZN5 1544 aa22.42■■□□□ 1.18
IRF3-225ENST00000600022 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
IRF3-225ENST00000600022 ZNF518AQ6AHZ1 1483 aa22.39■■□□□ 1.17
IRF3-225ENST00000600022 CLIP1P30622 1438 aa22.39■■□□□ 1.17
IRF3-225ENST00000600022 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.17
IRF3-225ENST00000600022 CDC42BPBQ9Y5S2 1711 aa22.37■■□□□ 1.17
IRF3-225ENST00000600022 KDM5CP41229 1560 aa22.37■■□□□ 1.17
IRF3-225ENST00000600022 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
IRF3-225ENST00000600022 DIP2CQ9Y2E4 1556 aa22.34■■□□□ 1.17
IRF3-225ENST00000600022 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
IRF3-225ENST00000600022 ABCA6Q8N139 1617 aa22.31■■□□□ 1.16
IRF3-225ENST00000600022 MLH3Q9UHC1 1453 aa22.3■■□□□ 1.16
IRF3-225ENST00000600022 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
IRF3-225ENST00000600022 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
IRF3-225ENST00000600022 ABCC1P33527 1531 aa22.27■■□□□ 1.16
IRF3-225ENST00000600022 HNRNPMP52272 730 aaKnown RBP eCLIP22.26■■□□□ 1.15
IRF3-225ENST00000600022 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
IRF3-225ENST00000600022 PREX1Q8TCU6 1659 aa22.25■■□□□ 1.15
IRF3-225ENST00000600022 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
IRF3-225ENST00000600022 STRCQ7RTU9 1775 aa22.23■■□□□ 1.15
IRF3-225ENST00000600022 REREQ9P2R6 1566 aa22.23■■□□□ 1.15
IRF3-225ENST00000600022 ITSN2Q9NZM3 1697 aa22.23■■□□□ 1.15
IRF3-225ENST00000600022 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
IRF3-225ENST00000600022 GPATCH8Q9UKJ3 1502 aaKnown RBP22.21■■□□□ 1.15
IRF3-225ENST00000600022 UHRF1BP1Q6BDS2 1440 aa22.21■■□□□ 1.15
IRF3-225ENST00000600022 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
IRF3-225ENST00000600022 AGLP35573 1532 aa22.2■■□□□ 1.14
IRF3-225ENST00000600022 C3P01024 1663 aa22.2■■□□□ 1.14
IRF3-225ENST00000600022 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
IRF3-225ENST00000600022 ESF1Q9H501 851 aaKnown RBP22.18■■□□□ 1.14
IRF3-225ENST00000600022 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
IRF3-225ENST00000600022 SPAG9O60271 1321 aaKnown RBP22.16■■□□□ 1.14
IRF3-225ENST00000600022 SYCP2Q9BX26 1530 aa22.16■■□□□ 1.14
IRF3-225ENST00000600022 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.14
IRF3-225ENST00000600022 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
IRF3-225ENST00000600022 DMRT2Q9Y5R5 561 aa22.14■■□□□ 1.13
IRF3-225ENST00000600022 ZMYM3Q14202 1370 aa22.1■■□□□ 1.13
IRF3-225ENST00000600022 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
IRF3-225ENST00000600022 SUPT6HQ7KZ85 1726 aaKnown RBP22.08■■□□□ 1.12
IRF3-225ENST00000600022 PTPRTO14522 1441 aa22.06■■□□□ 1.12
IRF3-225ENST00000600022 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
IRF3-225ENST00000600022 GGT6Q6P531 493 aa22.06■■□□□ 1.12
IRF3-225ENST00000600022 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
IRF3-225ENST00000600022 CNTLNQ9NXG0 1405 aa22.06■■□□□ 1.12
IRF3-225ENST00000600022 ATP7AQ04656 1500 aa22.05■■□□□ 1.12
IRF3-225ENST00000600022 NCKAP5LQ9HCH0 1330 aa22.05■■□□□ 1.12
IRF3-225ENST00000600022 NCOA1Q15788 1441 aa22.04■■□□□ 1.12
IRF3-225ENST00000600022 A2MP01023 1474 aa22.03■■□□□ 1.12
IRF3-225ENST00000600022 INO80Q9ULG1 1556 aaPredicted RBP22.01■■□□□ 1.11
IRF3-225ENST00000600022 LTBP4Q8N2S1 1624 aa22.01■■□□□ 1.11
IRF3-225ENST00000600022 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
IRF3-225ENST00000600022 CAMSAP1Q5T5Y3 1602 aa21.99■■□□□ 1.11
IRF3-225ENST00000600022 NPATQ14207 1427 aa21.99■■□□□ 1.11
IRF3-225ENST00000600022 CLTCQ00610 1675 aaKnown RBP21.99■■□□□ 1.11
IRF3-225ENST00000600022 MBD5Q9P267 1494 aa21.99■■□□□ 1.11
IRF3-225ENST00000600022 PLEKHH2Q8IVE3 1493 aa21.98■■□□□ 1.11
IRF3-225ENST00000600022 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
IRF3-225ENST00000600022 ILDR2Q71H61 639 aa21.97■■□□□ 1.11
IRF3-225ENST00000600022 MROH2AA6NES4 1674 aa21.97■■□□□ 1.11
IRF3-225ENST00000600022 PTPRKQ15262 1439 aa21.97■■□□□ 1.11
IRF3-225ENST00000600022 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
IRF3-225ENST00000600022 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
IRF3-225ENST00000600022 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
IRF3-225ENST00000600022 DISP3Q9P2K9 1392 aa21.91■■□□□ 1.1
IRF3-225ENST00000600022 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
IRF3-225ENST00000600022 DHX29Q7Z478 1369 aaKnown RBP21.89■■□□□ 1.1
IRF3-225ENST00000600022 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
IRF3-225ENST00000600022 LOC105371045A0A1W2PR82 267 aa21.88■■□□□ 1.09
IRF3-225ENST00000600022 KIF3BO15066 747 aa21.88■■□□□ 1.09
IRF3-225ENST00000600022 RTEL1-TNFRSF6BF6WH68 1400 aa21.87■■□□□ 1.09
IRF3-225ENST00000600022 ADGBQ8N7X0 1667 aa21.86■■□□□ 1.09
IRF3-225ENST00000600022 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
IRF3-225ENST00000600022 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
IRF3-225ENST00000600022 CEP170BQ9Y4F5 1589 aaPredicted RBP21.86■■□□□ 1.09
IRF3-225ENST00000600022 PKD2Q13563 968 aa21.85■■□□□ 1.09
IRF3-225ENST00000600022 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
IRF3-225ENST00000600022 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
IRF3-225ENST00000600022 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
IRF3-225ENST00000600022 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
IRF3-225ENST00000600022 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
IRF3-225ENST00000600022 CCDC141Q6ZP82 1450 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms