RNA–Protein interactions for RNA: ENST00000599754.1

PDE4C-215, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 528 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-215ENST00000599754 HSPA2P54652 639 aa23.37■■□□□ 1.33
PDE4C-215ENST00000599754 MLECQ14165 292 aa23.36■■□□□ 1.33
PDE4C-215ENST00000599754 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
PDE4C-215ENST00000599754 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
PDE4C-215ENST00000599754 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
PDE4C-215ENST00000599754 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
PDE4C-215ENST00000599754 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
PDE4C-215ENST00000599754 MYO5CQ9NQX4 1742 aa23.31■■□□□ 1.32
PDE4C-215ENST00000599754 KIF14Q15058 1648 aa23.31■■□□□ 1.32
PDE4C-215ENST00000599754 EFCAB2Q5VUJ9 269 aa23.29■■□□□ 1.32
PDE4C-215ENST00000599754 ATP10AO60312 1499 aa23.29■■□□□ 1.32
PDE4C-215ENST00000599754 C9orf84Q5VXU9 1444 aa23.28■■□□□ 1.32
PDE4C-215ENST00000599754 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
PDE4C-215ENST00000599754 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
PDE4C-215ENST00000599754 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
PDE4C-215ENST00000599754 ARHGAP5Q13017 1502 aa23.23■■□□□ 1.31
PDE4C-215ENST00000599754 ZNF518AQ6AHZ1 1483 aa23.23■■□□□ 1.31
PDE4C-215ENST00000599754 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
PDE4C-215ENST00000599754 KDM5CP41229 1560 aa23.21■■□□□ 1.31
PDE4C-215ENST00000599754 CLIP1P30622 1438 aa23.2■■□□□ 1.3
PDE4C-215ENST00000599754 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
PDE4C-215ENST00000599754 CEBPAP49715 358 aaPredicted RBP23.19■■□□□ 1.3
PDE4C-215ENST00000599754 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
PDE4C-215ENST00000599754 DIP2CQ9Y2E4 1556 aa23.16■■□□□ 1.3
PDE4C-215ENST00000599754 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
PDE4C-215ENST00000599754 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
PDE4C-215ENST00000599754 CERKQ8TCT0 537 aa23.13■■□□□ 1.29
PDE4C-215ENST00000599754 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
PDE4C-215ENST00000599754 ABCA6Q8N139 1617 aa23.12■■□□□ 1.29
PDE4C-215ENST00000599754 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
PDE4C-215ENST00000599754 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
PDE4C-215ENST00000599754 TRAPPC8Q9Y2L5 1435 aa23.1■■□□□ 1.29
PDE4C-215ENST00000599754 ABCC1P33527 1531 aa23.1■■□□□ 1.29
PDE4C-215ENST00000599754 MLH3Q9UHC1 1453 aa23.09■■□□□ 1.29
PDE4C-215ENST00000599754 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
PDE4C-215ENST00000599754 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
PDE4C-215ENST00000599754 UHRF1BP1Q6BDS2 1440 aa23.07■■□□□ 1.28
PDE4C-215ENST00000599754 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
PDE4C-215ENST00000599754 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
PDE4C-215ENST00000599754 AGLP35573 1532 aa23.03■■□□□ 1.28
PDE4C-215ENST00000599754 C3P01024 1663 aa23.02■■□□□ 1.28
PDE4C-215ENST00000599754 CDC42BPAQ5VT25 1732 aa23.01■■□□□ 1.27
PDE4C-215ENST00000599754 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
PDE4C-215ENST00000599754 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
PDE4C-215ENST00000599754 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
PDE4C-215ENST00000599754 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
PDE4C-215ENST00000599754 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
PDE4C-215ENST00000599754 SAMD9LQ8IVG5 1584 aa22.95■■□□□ 1.26
PDE4C-215ENST00000599754 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
PDE4C-215ENST00000599754 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
PDE4C-215ENST00000599754 PTPRTO14522 1441 aa22.91■■□□□ 1.26
PDE4C-215ENST00000599754 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
PDE4C-215ENST00000599754 GPATCH8Q9UKJ3 1502 aaKnown RBP22.91■■□□□ 1.26
PDE4C-215ENST00000599754 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
PDE4C-215ENST00000599754 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
PDE4C-215ENST00000599754 NCOA1Q15788 1441 aa22.86■■□□□ 1.25
PDE4C-215ENST00000599754 ATP7AQ04656 1500 aa22.85■■□□□ 1.25
PDE4C-215ENST00000599754 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
PDE4C-215ENST00000599754 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
PDE4C-215ENST00000599754 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
PDE4C-215ENST00000599754 NPATQ14207 1427 aa22.83■■□□□ 1.25
PDE4C-215ENST00000599754 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
PDE4C-215ENST00000599754 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
PDE4C-215ENST00000599754 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
PDE4C-215ENST00000599754 PLXNC1O60486 1568 aa22.81■■□□□ 1.24
PDE4C-215ENST00000599754 CCNB3Q8WWL7 1395 aa22.81■■□□□ 1.24
PDE4C-215ENST00000599754 CFDP1Q9UEE9 299 aaPredicted RBP22.81■■□□□ 1.24
PDE4C-215ENST00000599754 CAMSAP1Q5T5Y3 1602 aa22.81■■□□□ 1.24
PDE4C-215ENST00000599754 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
PDE4C-215ENST00000599754 A2MP01023 1474 aa22.79■■□□□ 1.24
PDE4C-215ENST00000599754 CLTCQ00610 1675 aaKnown RBP22.78■■□□□ 1.24
PDE4C-215ENST00000599754 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.24
PDE4C-215ENST00000599754 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
PDE4C-215ENST00000599754 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
PDE4C-215ENST00000599754 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
PDE4C-215ENST00000599754 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
PDE4C-215ENST00000599754 GGT6Q6P531 493 aa22.73■■□□□ 1.23
PDE4C-215ENST00000599754 ILDR2Q71H61 639 aa22.73■■□□□ 1.23
PDE4C-215ENST00000599754 ZNF644Q9H582 1327 aaPredicted RBP22.73■■□□□ 1.23
PDE4C-215ENST00000599754 PTPRKQ15262 1439 aa22.73■■□□□ 1.23
PDE4C-215ENST00000599754 ZNF142P52746 1687 aaPredicted RBP22.72■■□□□ 1.23
PDE4C-215ENST00000599754 IQSEC2Q5JU85 1478 aa22.72■■□□□ 1.23
PDE4C-215ENST00000599754 CEP170BQ9Y4F5 1589 aaPredicted RBP22.7■■□□□ 1.22
PDE4C-215ENST00000599754 ADGBQ8N7X0 1667 aa22.69■■□□□ 1.22
PDE4C-215ENST00000599754 EHBP1L1Q8N3D4 1523 aa22.69■■□□□ 1.22
PDE4C-215ENST00000599754 MBD5Q9P267 1494 aa22.69■■□□□ 1.22
PDE4C-215ENST00000599754 PLA2R1Q13018 1463 aa22.68■■□□□ 1.22
PDE4C-215ENST00000599754 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
PDE4C-215ENST00000599754 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
PDE4C-215ENST00000599754 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
PDE4C-215ENST00000599754 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
PDE4C-215ENST00000599754 PKD2Q13563 968 aa22.63■■□□□ 1.21
PDE4C-215ENST00000599754 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
PDE4C-215ENST00000599754 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
PDE4C-215ENST00000599754 DHX29Q7Z478 1369 aaKnown RBP22.61■■□□□ 1.21
PDE4C-215ENST00000599754 A2ML1A8K2U0 1454 aa22.6■■□□□ 1.21
PDE4C-215ENST00000599754 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
PDE4C-215ENST00000599754 SOCS7O14512 581 aa22.57■■□□□ 1.2
PDE4C-215ENST00000599754 CCDC141Q6ZP82 1450 aa22.57■■□□□ 1.2
PDE4C-215ENST00000599754 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms