RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 HFM1A2PYH4 1435 aa26.58■■□□□ 1.85
ARHGEF1-218ENST00000599589 PTPRKQ15262 1439 aa26.58■■□□□ 1.85
ARHGEF1-218ENST00000599589 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
ARHGEF1-218ENST00000599589 CCDC184Q52MB2 194 aa26.58■■□□□ 1.85
ARHGEF1-218ENST00000599589 B4GALNT3Q6L9W6 998 aa26.57■■□□□ 1.84
ARHGEF1-218ENST00000599589 CEP170Q5SW79 1584 aa26.57■■□□□ 1.84
ARHGEF1-218ENST00000599589 HSPA5P11021 654 aaKnown RBP26.56■■□□□ 1.84
ARHGEF1-218ENST00000599589 NUP160Q12769 1436 aa26.53■■□□□ 1.84
ARHGEF1-218ENST00000599589 ARID3CA6NKF2 412 aa26.51■■□□□ 1.83
ARHGEF1-218ENST00000599589 TCOF1Q13428 1488 aaKnown RBP26.5■■□□□ 1.83
ARHGEF1-218ENST00000599589 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
ARHGEF1-218ENST00000599589 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
ARHGEF1-218ENST00000599589 NAIPQ13075 1403 aa26.49■■□□□ 1.83
ARHGEF1-218ENST00000599589 FAM9BQ8IZU0 186 aa26.49■■□□□ 1.83
ARHGEF1-218ENST00000599589 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
ARHGEF1-218ENST00000599589 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
ARHGEF1-218ENST00000599589 CNTLNQ9NXG0 1405 aa26.47■■□□□ 1.83
ARHGEF1-218ENST00000599589 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
ARHGEF1-218ENST00000599589 NOP58Q9Y2X3 529 aaKnown RBP26.45■■□□□ 1.82
ARHGEF1-218ENST00000599589 EIF4G2P78344 907 aaKnown RBP eCLIP26.43■■□□□ 1.824e-7■■■■□ 23.6
ARHGEF1-218ENST00000599589 NBR1Q14596 966 aa26.42■■□□□ 1.82
ARHGEF1-218ENST00000599589 ZBED9Q6R2W3 1325 aa26.42■■□□□ 1.82
ARHGEF1-218ENST00000599589 PRKRIP1Q9H875 184 aaPredicted RBP26.41■■□□□ 1.82
ARHGEF1-218ENST00000599589 MRS2Q9HD23 443 aa26.4■■□□□ 1.82
ARHGEF1-218ENST00000599589 PAK3O75914 559 aaPredicted RBP26.4■■□□□ 1.82
ARHGEF1-218ENST00000599589 C11orf95C9JLR9 678 aaPredicted RBP26.36■■□□□ 1.81
ARHGEF1-218ENST00000599589 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
ARHGEF1-218ENST00000599589 CCDC7Q96M83 1385 aa26.32■■□□□ 1.8
ARHGEF1-218ENST00000599589 AKNAQ7Z591 1439 aa26.32■■□□□ 1.8
ARHGEF1-218ENST00000599589 RRP7BPQ9NSQ0 103 aa26.31■■□□□ 1.8
ARHGEF1-218ENST00000599589 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
ARHGEF1-218ENST00000599589 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
ARHGEF1-218ENST00000599589 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
ARHGEF1-218ENST00000599589 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
ARHGEF1-218ENST00000599589 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
ARHGEF1-218ENST00000599589 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
ARHGEF1-218ENST00000599589 L3MBTL2Q969R5 705 aa26.25■■□□□ 1.79
ARHGEF1-218ENST00000599589 ABCA8O94911 1581 aa26.22■■□□□ 1.79
ARHGEF1-218ENST00000599589 DAPK1P53355 1430 aa26.21■■□□□ 1.79
ARHGEF1-218ENST00000599589 KDM6BO15054 1643 aa26.2■■□□□ 1.78
ARHGEF1-218ENST00000599589 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
ARHGEF1-218ENST00000599589 IPO9Q96P70 1041 aaKnown RBP26.19■■□□□ 1.78
ARHGEF1-218ENST00000599589 ANP32AP39687 249 aaKnown RBP26.19■■□□□ 1.78
ARHGEF1-218ENST00000599589 SMG6Q86US8 1419 aaKnown RBP26.18■■□□□ 1.78
ARHGEF1-218ENST00000599589 ZNF644Q9H582 1327 aaPredicted RBP26.18■■□□□ 1.78
ARHGEF1-218ENST00000599589 ABCC5O15440 1437 aa26.18■■□□□ 1.78
ARHGEF1-218ENST00000599589 CCDC136Q96JN2 1154 aa26.18■■□□□ 1.78
ARHGEF1-218ENST00000599589 DNMT1P26358 1616 aaKnown RBP26.17■■□□□ 1.78
ARHGEF1-218ENST00000599589 ADCY10Q96PN6 1610 aa26.17■■□□□ 1.78
ARHGEF1-218ENST00000599589 FOXD1Q16676 465 aa26.17■■□□□ 1.78
ARHGEF1-218ENST00000599589 MPHOSPH9Q99550 1183 aa26.17■■□□□ 1.78
ARHGEF1-218ENST00000599589 CFDP1Q9UEE9 299 aaPredicted RBP26.17■■□□□ 1.78
ARHGEF1-218ENST00000599589 PLEKHD1A6NEE1 506 aa26.16■■□□□ 1.78
ARHGEF1-218ENST00000599589 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
ARHGEF1-218ENST00000599589 GPATCH8Q9UKJ3 1502 aaKnown RBP26.15■■□□□ 1.78
ARHGEF1-218ENST00000599589 PRKCSHP14314 528 aaPredicted RBP26.14■■□□□ 1.78
ARHGEF1-218ENST00000599589 ATP10BO94823 1461 aa26.14■■□□□ 1.78
ARHGEF1-218ENST00000599589 NBPF8Q3BBV2 869 aa26.14■■□□□ 1.77
ARHGEF1-218ENST00000599589 PTPRGP23470 1445 aa26.14■■□□□ 1.77
ARHGEF1-218ENST00000599589 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.77
ARHGEF1-218ENST00000599589 RTL5Q5HYW3 569 aaPredicted RBP26.13■■□□□ 1.77
ARHGEF1-218ENST00000599589 ZBTB47Q9UFB7 747 aaPredicted RBP26.13■■□□□ 1.77
ARHGEF1-218ENST00000599589 CHD1O14646 1710 aa26.12■■□□□ 1.77
ARHGEF1-218ENST00000599589 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
ARHGEF1-218ENST00000599589 KIF14Q15058 1648 aa26.12■■□□□ 1.77
ARHGEF1-218ENST00000599589 POLR1AO95602 1720 aaPredicted RBP26.11■■□□□ 1.77
ARHGEF1-218ENST00000599589 RNF123Q5XPI4 1314 aa26.1■■□□□ 1.77
ARHGEF1-218ENST00000599589 CAMSAP2Q08AD1 1489 aa26.1■■□□□ 1.77
ARHGEF1-218ENST00000599589 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.77
ARHGEF1-218ENST00000599589 SPATA31E1Q6ZUB1 1445 aa26.06■■□□□ 1.76
ARHGEF1-218ENST00000599589 ZNF777Q9ULD5 760 aaPredicted RBP26.04■■□□□ 1.76
ARHGEF1-218ENST00000599589 SENP3-EIF4A1A0A087X0R7 540 aa26.03■■□□□ 1.76
ARHGEF1-218ENST00000599589 ABCC10Q5T3U5 1492 aa26.02■■□□□ 1.76
ARHGEF1-218ENST00000599589 RPRD2Q5VT52 1461 aaKnown RBP26.02■■□□□ 1.76
ARHGEF1-218ENST00000599589 TEX14Q8IWB6 1497 aa26.02■■□□□ 1.76
ARHGEF1-218ENST00000599589 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
ARHGEF1-218ENST00000599589 ANO8Q9HCE9 1232 aaPredicted RBP26.01■■□□□ 1.76
ARHGEF1-218ENST00000599589 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
ARHGEF1-218ENST00000599589 DHX29Q7Z478 1369 aaKnown RBP25.99■■□□□ 1.75
ARHGEF1-218ENST00000599589 ADGRL2O95490 1459 aa25.95■■□□□ 1.74
ARHGEF1-218ENST00000599589 CDC42BPAQ5VT25 1732 aa25.95■■□□□ 1.74
ARHGEF1-218ENST00000599589 POLR3GLQ9BT43 218 aa25.94■■□□□ 1.74
ARHGEF1-218ENST00000599589 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
ARHGEF1-218ENST00000599589 NPM2Q86SE8 214 aaKnown RBP25.92■■□□□ 1.74
ARHGEF1-218ENST00000599589 IL27Q8NEV9 243 aa25.92■■□□□ 1.74
ARHGEF1-218ENST00000599589 ANKRD30AQ9BXX3 1397 aa25.92■■□□□ 1.74
ARHGEF1-218ENST00000599589 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
ARHGEF1-218ENST00000599589 SALL2Q9Y467 1007 aaPredicted RBP25.89■■□□□ 1.74
ARHGEF1-218ENST00000599589 SLC4A1APQ9BWU0 796 aaKnown RBP25.89■■□□□ 1.73
ARHGEF1-218ENST00000599589 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
ARHGEF1-218ENST00000599589 PNISRQ8TF01 805 aaKnown RBP25.86■■□□□ 1.73
ARHGEF1-218ENST00000599589 SHANK2Q9UPX8 1470 aa25.86■■□□□ 1.73
ARHGEF1-218ENST00000599589 ERCC6L2Q5T890 1561 aa25.85■■□□□ 1.73
ARHGEF1-218ENST00000599589 LAS1LQ9Y4W2 734 aaKnown RBP25.84■■□□□ 1.73
ARHGEF1-218ENST00000599589 TSPY4P0CV99 314 aa25.83■■□□□ 1.73
ARHGEF1-218ENST00000599589 TSPY10P0CW01 314 aa25.83■■□□□ 1.73
ARHGEF1-218ENST00000599589 RTN4Q9NQC3 1192 aaKnown RBP25.83■■□□□ 1.73
ARHGEF1-218ENST00000599589 ABCC2Q92887 1545 aa25.83■■□□□ 1.73
ARHGEF1-218ENST00000599589 TMC1Q8TDI8 760 aa25.83■■□□□ 1.72
ARHGEF1-218ENST00000599589 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms