RNA–Protein interactions for RNA: ENST00000599329.1

GTPBP3-219, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 3

Gene GTPBP3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-219ENST00000599329 PREX2Q70Z35 1606 aa24.79■■□□□ 1.56
GTPBP3-219ENST00000599329 SCAPERQ9BY12 1400 aa24.76■■□□□ 1.55
GTPBP3-219ENST00000599329 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
GTPBP3-219ENST00000599329 MAP3K1Q13233 1512 aa24.75■■□□□ 1.55
GTPBP3-219ENST00000599329 GPATCH8Q9UKJ3 1502 aaKnown RBP24.75■■□□□ 1.55
GTPBP3-219ENST00000599329 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
GTPBP3-219ENST00000599329 RICTORQ6R327 1708 aa24.74■■□□□ 1.55
GTPBP3-219ENST00000599329 POGZQ7Z3K3 1410 aa24.73■■□□□ 1.55
GTPBP3-219ENST00000599329 LRRC9Q6ZRR7 1453 aa24.7■■□□□ 1.55
GTPBP3-219ENST00000599329 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.55
GTPBP3-219ENST00000599329 ZMYM4Q5VZL5 1548 aa24.7■■□□□ 1.54
GTPBP3-219ENST00000599329 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
GTPBP3-219ENST00000599329 ABCC1P33527 1531 aa24.66■■□□□ 1.54
GTPBP3-219ENST00000599329 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
GTPBP3-219ENST00000599329 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.54
GTPBP3-219ENST00000599329 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.54
GTPBP3-219ENST00000599329 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.53
GTPBP3-219ENST00000599329 ZNF518AQ6AHZ1 1483 aa24.64■■□□□ 1.53
GTPBP3-219ENST00000599329 ARHGEF40Q8TER5 1519 aa24.63■■□□□ 1.53
GTPBP3-219ENST00000599329 MAGI2Q86UL8 1455 aa24.63■■□□□ 1.53
GTPBP3-219ENST00000599329 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
GTPBP3-219ENST00000599329 KDM4FA0A1W2PPD8 638 aa24.62■■□□□ 1.53
GTPBP3-219ENST00000599329 ZNF777Q9ULD5 760 aaPredicted RBP24.61■■□□□ 1.53
GTPBP3-219ENST00000599329 KDM5CP41229 1560 aa24.61■■□□□ 1.53
GTPBP3-219ENST00000599329 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
GTPBP3-219ENST00000599329 AFAP1Q8N556 730 aa24.6■■□□□ 1.53
GTPBP3-219ENST00000599329 TRAPPC8Q9Y2L5 1435 aa24.6■■□□□ 1.53
GTPBP3-219ENST00000599329 APLP2Q06481 763 aa24.59■■□□□ 1.53
GTPBP3-219ENST00000599329 ZFYVE16Q7Z3T8 1539 aa24.59■■□□□ 1.53
GTPBP3-219ENST00000599329 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
GTPBP3-219ENST00000599329 KIAA1107Q9UPP5 1409 aa24.58■■□□□ 1.53
GTPBP3-219ENST00000599329 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.52
GTPBP3-219ENST00000599329 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
GTPBP3-219ENST00000599329 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
GTPBP3-219ENST00000599329 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
GTPBP3-219ENST00000599329 HECW2Q9P2P5 1572 aa24.52■■□□□ 1.52
GTPBP3-219ENST00000599329 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.52
GTPBP3-219ENST00000599329 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
GTPBP3-219ENST00000599329 ATP10AO60312 1499 aa24.49■■□□□ 1.51
GTPBP3-219ENST00000599329 MBD5Q9P267 1494 aa24.48■■□□□ 1.51
GTPBP3-219ENST00000599329 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
GTPBP3-219ENST00000599329 MYOM3Q5VTT5 1437 aa24.46■■□□□ 1.51
GTPBP3-219ENST00000599329 C9orf84Q5VXU9 1444 aa24.45■■□□□ 1.51
GTPBP3-219ENST00000599329 ARID4BQ4LE39 1312 aaPredicted RBP24.45■■□□□ 1.5
GTPBP3-219ENST00000599329 DIP2CQ9Y2E4 1556 aa24.45■■□□□ 1.5
GTPBP3-219ENST00000599329 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
GTPBP3-219ENST00000599329 SIGLEC1Q9BZZ2 1709 aa24.44■■□□□ 1.5
GTPBP3-219ENST00000599329 ABCA6Q8N139 1617 aa24.43■■□□□ 1.5
GTPBP3-219ENST00000599329 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
GTPBP3-219ENST00000599329 MIA2Q96PC5 1412 aa24.43■■□□□ 1.5
GTPBP3-219ENST00000599329 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
GTPBP3-219ENST00000599329 REREQ9P2R6 1566 aa24.4■■□□□ 1.5
GTPBP3-219ENST00000599329 BCORL1Q5H9F3 1711 aa24.4■■□□□ 1.5
GTPBP3-219ENST00000599329 ADAMTSL3P82987 1691 aa24.4■■□□□ 1.5
GTPBP3-219ENST00000599329 INO80Q9ULG1 1556 aaPredicted RBP24.39■■□□□ 1.5
GTPBP3-219ENST00000599329 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
GTPBP3-219ENST00000599329 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
GTPBP3-219ENST00000599329 ARHGEF5Q12774 1597 aa24.36■■□□□ 1.49
GTPBP3-219ENST00000599329 RSPH4AQ5TD94 716 aa24.35■■□□□ 1.49
GTPBP3-219ENST00000599329 RTEL1-TNFRSF6BF6WH68 1400 aa24.33■■□□□ 1.49
GTPBP3-219ENST00000599329 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
GTPBP3-219ENST00000599329 AGLP35573 1532 aa24.32■■□□□ 1.48
GTPBP3-219ENST00000599329 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
GTPBP3-219ENST00000599329 MLECQ14165 292 aa24.29■■□□□ 1.48
GTPBP3-219ENST00000599329 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
GTPBP3-219ENST00000599329 PTPRMP28827 1452 aa24.27■■□□□ 1.48
GTPBP3-219ENST00000599329 TCOF1Q13428 1488 aaKnown RBP24.27■■□□□ 1.48
GTPBP3-219ENST00000599329 A2MP01023 1474 aa24.26■■□□□ 1.47
GTPBP3-219ENST00000599329 PLXNC1O60486 1568 aa24.26■■□□□ 1.47
GTPBP3-219ENST00000599329 TSPY4P0CV99 314 aa24.24■■□□□ 1.47
GTPBP3-219ENST00000599329 TSPY10P0CW01 314 aa24.24■■□□□ 1.47
GTPBP3-219ENST00000599329 ADGBQ8N7X0 1667 aa24.22■■□□□ 1.47
GTPBP3-219ENST00000599329 MAST1Q9Y2H9 1570 aa24.22■■□□□ 1.47
GTPBP3-219ENST00000599329 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
GTPBP3-219ENST00000599329 ABCC5O15440 1437 aa24.2■■□□□ 1.46
GTPBP3-219ENST00000599329 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
GTPBP3-219ENST00000599329 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
GTPBP3-219ENST00000599329 FER1L4A9Z1Z3 1794 aa24.19■■□□□ 1.46
GTPBP3-219ENST00000599329 SHANK2Q9UPX8 1470 aa24.18■■□□□ 1.46
GTPBP3-219ENST00000599329 DAPK1P53355 1430 aa24.17■■□□□ 1.46
GTPBP3-219ENST00000599329 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
GTPBP3-219ENST00000599329 CROCC2H7BZ55 1655 aa24.14■■□□□ 1.45
GTPBP3-219ENST00000599329 FAM50AQ14320 339 aaKnown RBP24.12■■□□□ 1.45
GTPBP3-219ENST00000599329 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
GTPBP3-219ENST00000599329 KIF3BO15066 747 aa24.07■■□□□ 1.44
GTPBP3-219ENST00000599329 GGT6Q6P531 493 aa24.07■■□□□ 1.44
GTPBP3-219ENST00000599329 ESF1Q9H501 851 aaKnown RBP24.07■■□□□ 1.44
GTPBP3-219ENST00000599329 KIF15Q9NS87 1388 aa24.06■■□□□ 1.44
GTPBP3-219ENST00000599329 CEBPAP49715 358 aaPredicted RBP24.05■■□□□ 1.44
GTPBP3-219ENST00000599329 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
GTPBP3-219ENST00000599329 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
GTPBP3-219ENST00000599329 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
GTPBP3-219ENST00000599329 ANKRD30AQ9BXX3 1397 aa24.03■■□□□ 1.44
GTPBP3-219ENST00000599329 NCOA1Q15788 1441 aa24.02■■□□□ 1.44
GTPBP3-219ENST00000599329 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
GTPBP3-219ENST00000599329 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
GTPBP3-219ENST00000599329 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
GTPBP3-219ENST00000599329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.44
GTPBP3-219ENST00000599329 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
GTPBP3-219ENST00000599329 MROH2AA6NES4 1674 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms