RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
PDE4C-214ENST00000599188 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
PDE4C-214ENST00000599188 CHIC2Q9UKJ5 165 aa17.6■□□□□ 0.41
PDE4C-214ENST00000599188 TONSLQ96HA7 1378 aa17.59■□□□□ 0.41
PDE4C-214ENST00000599188 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
PDE4C-214ENST00000599188 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
PDE4C-214ENST00000599188 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
PDE4C-214ENST00000599188 FAM69CQ0P6D2 419 aa17.54■□□□□ 0.4
PDE4C-214ENST00000599188 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
PDE4C-214ENST00000599188 KDM6BO15054 1643 aa17.54■□□□□ 0.4
PDE4C-214ENST00000599188 DAPK1P53355 1430 aa17.52■□□□□ 0.4
PDE4C-214ENST00000599188 DENND4BO75064 1496 aaPredicted RBP17.51■□□□□ 0.39
PDE4C-214ENST00000599188 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
PDE4C-214ENST00000599188 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
PDE4C-214ENST00000599188 ROCK1Q13464 1354 aa17.5■□□□□ 0.39
PDE4C-214ENST00000599188 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
PDE4C-214ENST00000599188 ABCC5O15440 1437 aa17.49■□□□□ 0.39
PDE4C-214ENST00000599188 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
PDE4C-214ENST00000599188 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
PDE4C-214ENST00000599188 TSPOAP1O95153 1857 aa17.49■□□□□ 0.39
PDE4C-214ENST00000599188 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
PDE4C-214ENST00000599188 ZNF644Q9H582 1327 aaPredicted RBP17.48■□□□□ 0.39
PDE4C-214ENST00000599188 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
PDE4C-214ENST00000599188 KDM5BQ9UGL1 1544 aa17.48■□□□□ 0.39
PDE4C-214ENST00000599188 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
PDE4C-214ENST00000599188 ABCA8O94911 1581 aa17.47■□□□□ 0.39
PDE4C-214ENST00000599188 DIP2BQ9P265 1576 aa17.47■□□□□ 0.39
PDE4C-214ENST00000599188 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
PDE4C-214ENST00000599188 MPHOSPH9Q99550 1183 aa17.45■□□□□ 0.38
PDE4C-214ENST00000599188 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
PDE4C-214ENST00000599188 KIF14Q15058 1648 aa17.43■□□□□ 0.38
PDE4C-214ENST00000599188 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
PDE4C-214ENST00000599188 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
PDE4C-214ENST00000599188 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
PDE4C-214ENST00000599188 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
PDE4C-214ENST00000599188 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
PDE4C-214ENST00000599188 ATP10BO94823 1461 aa17.37■□□□□ 0.37
PDE4C-214ENST00000599188 FOXD1Q16676 465 aa17.36■□□□□ 0.37
PDE4C-214ENST00000599188 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
PDE4C-214ENST00000599188 WDR7Q9Y4E6 1490 aa17.35■□□□□ 0.37
PDE4C-214ENST00000599188 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
PDE4C-214ENST00000599188 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
PDE4C-214ENST00000599188 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
PDE4C-214ENST00000599188 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
PDE4C-214ENST00000599188 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
PDE4C-214ENST00000599188 ADGRL2O95490 1459 aa17.33■□□□□ 0.37
PDE4C-214ENST00000599188 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
PDE4C-214ENST00000599188 ANP32CO43423 234 aa17.32■□□□□ 0.36
PDE4C-214ENST00000599188 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
PDE4C-214ENST00000599188 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
PDE4C-214ENST00000599188 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
PDE4C-214ENST00000599188 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
PDE4C-214ENST00000599188 PZPP20742 1482 aa17.29■□□□□ 0.36
PDE4C-214ENST00000599188 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
PDE4C-214ENST00000599188 ANKRD30AQ9BXX3 1397 aa17.29■□□□□ 0.36
PDE4C-214ENST00000599188 GLI2P10070 1586 aa17.28■□□□□ 0.36
PDE4C-214ENST00000599188 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
PDE4C-214ENST00000599188 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
PDE4C-214ENST00000599188 MAP3K4Q9Y6R4 1608 aa17.26■□□□□ 0.35
PDE4C-214ENST00000599188 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
PDE4C-214ENST00000599188 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDE4C-214ENST00000599188 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
PDE4C-214ENST00000599188 WASHC2AQ641Q2 1341 aa17.23■□□□□ 0.35
PDE4C-214ENST00000599188 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
PDE4C-214ENST00000599188 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
PDE4C-214ENST00000599188 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.35
PDE4C-214ENST00000599188 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
PDE4C-214ENST00000599188 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
PDE4C-214ENST00000599188 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
PDE4C-214ENST00000599188 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
PDE4C-214ENST00000599188 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
PDE4C-214ENST00000599188 COL17A1Q9UMD9 1497 aaPredicted RBP17.17■□□□□ 0.34
PDE4C-214ENST00000599188 PKD2Q13563 968 aa17.17■□□□□ 0.34
PDE4C-214ENST00000599188 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
PDE4C-214ENST00000599188 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDE4C-214ENST00000599188 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
PDE4C-214ENST00000599188 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
PDE4C-214ENST00000599188 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.34
PDE4C-214ENST00000599188 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
PDE4C-214ENST00000599188 NUP155O75694 1391 aa17.14■□□□□ 0.33
PDE4C-214ENST00000599188 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
PDE4C-214ENST00000599188 KDM5DQ9BY66 1539 aa17.13■□□□□ 0.33
PDE4C-214ENST00000599188 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
PDE4C-214ENST00000599188 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
PDE4C-214ENST00000599188 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
PDE4C-214ENST00000599188 CCDC7Q96M83 1385 aa17.12■□□□□ 0.33
PDE4C-214ENST00000599188 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
PDE4C-214ENST00000599188 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
PDE4C-214ENST00000599188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDE4C-214ENST00000599188 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
PDE4C-214ENST00000599188 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
PDE4C-214ENST00000599188 SYCP2Q9BX26 1530 aa17.07■□□□□ 0.32
PDE4C-214ENST00000599188 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
PDE4C-214ENST00000599188 POLR1AO95602 1720 aaPredicted RBP17.06■□□□□ 0.32
PDE4C-214ENST00000599188 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
PDE4C-214ENST00000599188 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
PDE4C-214ENST00000599188 UHRF1BP1Q6BDS2 1440 aa17.03■□□□□ 0.32
PDE4C-214ENST00000599188 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
PDE4C-214ENST00000599188 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
PDE4C-214ENST00000599188 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms