RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
PRKD2-208ENST00000597390 MAP3K1Q13233 1512 aa21.47■■□□□ 1.03
PRKD2-208ENST00000597390 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
PRKD2-208ENST00000597390 ZMYM4Q5VZL5 1548 aa21.41■■□□□ 1.02
PRKD2-208ENST00000597390 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
PRKD2-208ENST00000597390 ARHGEF40Q8TER5 1519 aa21.41■■□□□ 1.02
PRKD2-208ENST00000597390 SCAPERQ9BY12 1400 aa21.39■■□□□ 1.01
PRKD2-208ENST00000597390 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
PRKD2-208ENST00000597390 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
PRKD2-208ENST00000597390 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
PRKD2-208ENST00000597390 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
PRKD2-208ENST00000597390 KANK4Q5T7N3 995 aaPredicted RBP21.36■■□□□ 1.01
PRKD2-208ENST00000597390 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
PRKD2-208ENST00000597390 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
PRKD2-208ENST00000597390 APLP2Q06481 763 aa21.35■■□□□ 1.01
PRKD2-208ENST00000597390 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
PRKD2-208ENST00000597390 ADAMTSL3P82987 1691 aa21.34■■□□□ 1.01
PRKD2-208ENST00000597390 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
PRKD2-208ENST00000597390 EHBP1L1Q8N3D4 1523 aa21.33■■□□□ 1
PRKD2-208ENST00000597390 CDC42BPAQ5VT25 1732 aa21.32■■□□□ 1
PRKD2-208ENST00000597390 MTUS2Q5JR59 1369 aa21.31■■□□□ 1
PRKD2-208ENST00000597390 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
PRKD2-208ENST00000597390 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
PRKD2-208ENST00000597390 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
PRKD2-208ENST00000597390 KDM5CP41229 1560 aa21.27■□□□□ 0.99
PRKD2-208ENST00000597390 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
PRKD2-208ENST00000597390 ABCC1P33527 1531 aa21.25■□□□□ 0.99
PRKD2-208ENST00000597390 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
PRKD2-208ENST00000597390 SIGLEC1Q9BZZ2 1709 aa21.25■□□□□ 0.99
PRKD2-208ENST00000597390 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
PRKD2-208ENST00000597390 PTPRMP28827 1452 aa21.23■□□□□ 0.99
PRKD2-208ENST00000597390 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
PRKD2-208ENST00000597390 AFAP1Q8N556 730 aa21.23■□□□□ 0.99
PRKD2-208ENST00000597390 ATP10AO60312 1499 aa21.22■□□□□ 0.99
PRKD2-208ENST00000597390 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
PRKD2-208ENST00000597390 LMTK3Q96Q04 1460 aa21.22■□□□□ 0.99
PRKD2-208ENST00000597390 NCOA2Q15596 1464 aa21.21■□□□□ 0.99
PRKD2-208ENST00000597390 C9orf84Q5VXU9 1444 aa21.21■□□□□ 0.99
PRKD2-208ENST00000597390 ARHGEF12Q9NZN5 1544 aa21.2■□□□□ 0.98
PRKD2-208ENST00000597390 RIMS1Q86UR5 1692 aaKnown RBP21.19■□□□□ 0.98
PRKD2-208ENST00000597390 SAMD9LQ8IVG5 1584 aa21.18■□□□□ 0.98
PRKD2-208ENST00000597390 TRAPPC8Q9Y2L5 1435 aa21.18■□□□□ 0.98
PRKD2-208ENST00000597390 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
PRKD2-208ENST00000597390 MLH3Q9UHC1 1453 aa21.18■□□□□ 0.98
PRKD2-208ENST00000597390 DIP2CQ9Y2E4 1556 aa21.16■□□□□ 0.98
PRKD2-208ENST00000597390 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
PRKD2-208ENST00000597390 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
PRKD2-208ENST00000597390 ABCA6Q8N139 1617 aa21.14■□□□□ 0.98
PRKD2-208ENST00000597390 REREQ9P2R6 1566 aa21.14■□□□□ 0.97
PRKD2-208ENST00000597390 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
PRKD2-208ENST00000597390 SYCP2Q9BX26 1530 aa21.13■□□□□ 0.97
PRKD2-208ENST00000597390 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
PRKD2-208ENST00000597390 KIDINS220Q9ULH0 1771 aa21.12■□□□□ 0.97
PRKD2-208ENST00000597390 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
PRKD2-208ENST00000597390 MLECQ14165 292 aa21.11■□□□□ 0.97
PRKD2-208ENST00000597390 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
PRKD2-208ENST00000597390 HNRNPMP52272 730 aaKnown RBP eCLIP21.08■□□□□ 0.96
PRKD2-208ENST00000597390 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
PRKD2-208ENST00000597390 AGLP35573 1532 aa21.06■□□□□ 0.96
PRKD2-208ENST00000597390 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
PRKD2-208ENST00000597390 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
PRKD2-208ENST00000597390 SOCS7O14512 581 aa21.04■□□□□ 0.96
PRKD2-208ENST00000597390 INO80Q9ULG1 1556 aaPredicted RBP21.03■□□□□ 0.96
PRKD2-208ENST00000597390 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
PRKD2-208ENST00000597390 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.95
PRKD2-208ENST00000597390 MIA2Q96PC5 1412 aa21.02■□□□□ 0.95
PRKD2-208ENST00000597390 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
PRKD2-208ENST00000597390 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
PRKD2-208ENST00000597390 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
PRKD2-208ENST00000597390 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
PRKD2-208ENST00000597390 RRBP1Q9P2E9 1410 aaKnown RBP20.97■□□□□ 0.95
PRKD2-208ENST00000597390 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
PRKD2-208ENST00000597390 CAMSAP2Q08AD1 1489 aa20.95■□□□□ 0.94
PRKD2-208ENST00000597390 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
PRKD2-208ENST00000597390 DISP3Q9P2K9 1392 aa20.95■□□□□ 0.94
PRKD2-208ENST00000597390 PLXNC1O60486 1568 aa20.94■□□□□ 0.94
PRKD2-208ENST00000597390 A2MP01023 1474 aa20.93■□□□□ 0.94
PRKD2-208ENST00000597390 RTEL1-TNFRSF6BF6WH68 1400 aa20.92■□□□□ 0.94
PRKD2-208ENST00000597390 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
PRKD2-208ENST00000597390 C3P01024 1663 aa20.91■□□□□ 0.94
PRKD2-208ENST00000597390 PREX1Q8TCU6 1659 aa20.91■□□□□ 0.94
PRKD2-208ENST00000597390 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
PRKD2-208ENST00000597390 CEBPAP49715 358 aaPredicted RBP20.91■□□□□ 0.94
PRKD2-208ENST00000597390 RSPH4AQ5TD94 716 aa20.9■□□□□ 0.94
PRKD2-208ENST00000597390 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
PRKD2-208ENST00000597390 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
PRKD2-208ENST00000597390 ARHGEF5Q12774 1597 aa20.9■□□□□ 0.94
PRKD2-208ENST00000597390 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.93
PRKD2-208ENST00000597390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
PRKD2-208ENST00000597390 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
PRKD2-208ENST00000597390 HSPA2P54652 639 aa20.85■□□□□ 0.93
PRKD2-208ENST00000597390 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
PRKD2-208ENST00000597390 DNMT1P26358 1616 aaKnown RBP20.83■□□□□ 0.93
PRKD2-208ENST00000597390 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.92
PRKD2-208ENST00000597390 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
PRKD2-208ENST00000597390 UHRF1BP1Q6BDS2 1440 aa20.82■□□□□ 0.92
PRKD2-208ENST00000597390 TSPY4P0CV99 314 aa20.81■□□□□ 0.92
PRKD2-208ENST00000597390 TSPY10P0CW01 314 aa20.81■□□□□ 0.92
PRKD2-208ENST00000597390 CROCC2H7BZ55 1655 aa20.8■□□□□ 0.92
PRKD2-208ENST00000597390 ABCC5O15440 1437 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms