RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
SIN3B-208ENST00000596638 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
SIN3B-208ENST00000596638 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
SIN3B-208ENST00000596638 ABCA9Q8IUA7 1624 aa12.43□□□□□ -0.42
SIN3B-208ENST00000596638 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
SIN3B-208ENST00000596638 ARHGAP35Q9NRY4 1499 aa12.42□□□□□ -0.42
SIN3B-208ENST00000596638 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-208ENST00000596638 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-208ENST00000596638 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
SIN3B-208ENST00000596638 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
SIN3B-208ENST00000596638 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
SIN3B-208ENST00000596638 NEO1Q92859 1461 aa12.38□□□□□ -0.43
SIN3B-208ENST00000596638 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
SIN3B-208ENST00000596638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.37□□□□□ -0.43
SIN3B-208ENST00000596638 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
SIN3B-208ENST00000596638 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
SIN3B-208ENST00000596638 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
SIN3B-208ENST00000596638 FRMPD1Q5SYB0 1578 aa12.35□□□□□ -0.43
SIN3B-208ENST00000596638 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
SIN3B-208ENST00000596638 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
SIN3B-208ENST00000596638 PLCH2O75038 1416 aa12.32□□□□□ -0.44
SIN3B-208ENST00000596638 FANCAO15360 1455 aa12.32□□□□□ -0.44
SIN3B-208ENST00000596638 LMTK3Q96Q04 1460 aa12.32□□□□□ -0.44
SIN3B-208ENST00000596638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■■□□ 17.8
SIN3B-208ENST00000596638 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
SIN3B-208ENST00000596638 YEATS2Q9ULM3 1422 aa12.31□□□□□ -0.44
SIN3B-208ENST00000596638 AFAP1Q8N556 730 aa12.31□□□□□ -0.44
SIN3B-208ENST00000596638 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 SCAPERQ9BY12 1400 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 PTPRMP28827 1452 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
SIN3B-208ENST00000596638 FMN1Q68DA7 1419 aa12.29□□□□□ -0.44
SIN3B-208ENST00000596638 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
SIN3B-208ENST00000596638 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
SIN3B-208ENST00000596638 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
SIN3B-208ENST00000596638 MLECQ14165 292 aa12.28□□□□□ -0.44
SIN3B-208ENST00000596638 SOCS7O14512 581 aa12.27□□□□□ -0.45
SIN3B-208ENST00000596638 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
SIN3B-208ENST00000596638 SIGLEC1Q9BZZ2 1709 aa12.26□□□□□ -0.45
SIN3B-208ENST00000596638 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
SIN3B-208ENST00000596638 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
SIN3B-208ENST00000596638 BCORL1Q5H9F3 1711 aa12.23□□□□□ -0.45
SIN3B-208ENST00000596638 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
SIN3B-208ENST00000596638 KIF14Q15058 1648 aa12.23□□□□□ -0.45
SIN3B-208ENST00000596638 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
SIN3B-208ENST00000596638 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
SIN3B-208ENST00000596638 HSPA2P54652 639 aa12.23□□□□□ -0.45
SIN3B-208ENST00000596638 FYCO1Q9BQS8 1478 aa12.21□□□□□ -0.45
SIN3B-208ENST00000596638 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
SIN3B-208ENST00000596638 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.45
SIN3B-208ENST00000596638 MADDQ8WXG6 1647 aa12.21□□□□□ -0.46
SIN3B-208ENST00000596638 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
SIN3B-208ENST00000596638 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.46
SIN3B-208ENST00000596638 ZMYM4Q5VZL5 1548 aa12.2□□□□□ -0.46
SIN3B-208ENST00000596638 ATP10AO60312 1499 aa12.2□□□□□ -0.46
SIN3B-208ENST00000596638 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
SIN3B-208ENST00000596638 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
SIN3B-208ENST00000596638 ARHGEF40Q8TER5 1519 aa12.19□□□□□ -0.46
SIN3B-208ENST00000596638 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
SIN3B-208ENST00000596638 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
SIN3B-208ENST00000596638 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIN3B-208ENST00000596638 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
SIN3B-208ENST00000596638 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
SIN3B-208ENST00000596638 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
SIN3B-208ENST00000596638 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
SIN3B-208ENST00000596638 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
SIN3B-208ENST00000596638 CDC42BPBQ9Y5S2 1711 aa12.14□□□□□ -0.47
SIN3B-208ENST00000596638 RIMS1Q86UR5 1692 aaKnown RBP12.14□□□□□ -0.47
SIN3B-208ENST00000596638 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
SIN3B-208ENST00000596638 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
SIN3B-208ENST00000596638 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
SIN3B-208ENST00000596638 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
SIN3B-208ENST00000596638 MYO5CQ9NQX4 1742 aa12.12□□□□□ -0.47
SIN3B-208ENST00000596638 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
SIN3B-208ENST00000596638 KDM5CP41229 1560 aa12.11□□□□□ -0.47
SIN3B-208ENST00000596638 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
SIN3B-208ENST00000596638 ITGAEP38570 1179 aa12.11□□□□□ -0.47
SIN3B-208ENST00000596638 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
SIN3B-208ENST00000596638 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
SIN3B-208ENST00000596638 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
SIN3B-208ENST00000596638 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
SIN3B-208ENST00000596638 DIP2CQ9Y2E4 1556 aa12.08□□□□□ -0.48
SIN3B-208ENST00000596638 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
SIN3B-208ENST00000596638 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
SIN3B-208ENST00000596638 SIN3AQ96ST3 1273 aa12.07□□□□□ -0.48
SIN3B-208ENST00000596638 ABCC1P33527 1531 aa12.06□□□□□ -0.48
SIN3B-208ENST00000596638 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
SIN3B-208ENST00000596638 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
SIN3B-208ENST00000596638 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
SIN3B-208ENST00000596638 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
SIN3B-208ENST00000596638 ANP32CO43423 234 aa12.05□□□□□ -0.48
SIN3B-208ENST00000596638 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
SIN3B-208ENST00000596638 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
SIN3B-208ENST00000596638 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
SIN3B-208ENST00000596638 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
SIN3B-208ENST00000596638 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
SIN3B-208ENST00000596638 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
SIN3B-208ENST00000596638 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms