RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	FMN1	Q68DA7	1419 aa		30.47	■■■□□ 2.47
CIRBP-238	ENST00000592412	KIF14	Q15058	1648 aa		30.45	■■■□□ 2.47
CIRBP-238	ENST00000592412	UBTF	P17480	764 aa	Known RBP	30.44	■■■□□ 2.46
CIRBP-238	ENST00000592412	MYO5C	Q9NQX4	1742 aa		30.44	■■■□□ 2.46
CIRBP-238	ENST00000592412	HSPA2	P54652	639 aa		30.42	■■■□□ 2.46
CIRBP-238	ENST00000592412	FER1L4	A9Z1Z3	1794 aa		30.41	■■■□□ 2.46
CIRBP-238	ENST00000592412	ATP1B4	Q9UN42	357 aa	Predicted RBP	30.4	■■■□□ 2.46
CIRBP-238	ENST00000592412	MLEC	Q14165	292 aa		30.39	■■■□□ 2.46
CIRBP-238	ENST00000592412	PLPPR3	Q6T4P5	718 aa		30.39	■■■□□ 2.46
CIRBP-238	ENST00000592412	LRRIQ1	Q96JM4	1722 aa		30.39	■■■□□ 2.45
CIRBP-238	ENST00000592412	ATP10A	O60312	1499 aa		30.38	■■■□□ 2.45
CIRBP-238	ENST00000592412	ARHGEF12	Q9NZN5	1544 aa		30.37	■■■□□ 2.45
CIRBP-238	ENST00000592412	EFCAB2	Q5VUJ9	269 aa		30.37	■■■□□ 2.45
CIRBP-238	ENST00000592412	TRO	Q12816	1431 aa	Predicted RBP	30.36	■■■□□ 2.45
CIRBP-238	ENST00000592412	C9orf84	Q5VXU9	1444 aa		30.35	■■■□□ 2.45
CIRBP-238	ENST00000592412	CHIC1	Q5VXU3	224 aa		30.33	■■■□□ 2.45
CIRBP-238	ENST00000592412	CDK11A	Q9UQ88	783 aa	Predicted RBP	30.32	■■■□□ 2.44
CIRBP-238	ENST00000592412	KDM5C	P41229	1560 aa		30.32	■■■□□ 2.44
CIRBP-238	ENST00000592412	ZNF518A	Q6AHZ1	1483 aa		30.3	■■■□□ 2.44
CIRBP-238	ENST00000592412	ARHGAP5	Q13017	1502 aa		30.29	■■■□□ 2.44
CIRBP-238	ENST00000592412	AFAP1	Q8N556	730 aa		30.26	■■■□□ 2.43
CIRBP-238	ENST00000592412	CDC42BPB	Q9Y5S2	1711 aa		30.25	■■■□□ 2.43
CIRBP-238	ENST00000592412	CLIP1	P30622	1438 aa		30.24	■■■□□ 2.43
CIRBP-238	ENST00000592412	DIP2C	Q9Y2E4	1556 aa		30.24	■■■□□ 2.43
CIRBP-238	ENST00000592412	CEBPA	P49715	358 aa	Predicted RBP	30.21	■■■□□ 2.43
CIRBP-238	ENST00000592412	PREX1	Q8TCU6	1659 aa		30.2	■■■□□ 2.43
CIRBP-238	ENST00000592412	RERE	Q9P2R6	1566 aa		30.19	■■■□□ 2.42
CIRBP-238	ENST00000592412	PREX2	Q70Z35	1606 aa		30.18	■■■□□ 2.42
CIRBP-238	ENST00000592412	ABCA6	Q8N139	1617 aa		30.18	■■■□□ 2.42
CIRBP-238	ENST00000592412	CASKIN1	Q8WXD9	1431 aa		30.16	■■■□□ 2.42
CIRBP-238	ENST00000592412	MLH3	Q9UHC1	1453 aa		30.16	■■■□□ 2.42
CIRBP-238	ENST00000592412	ABCC1	P33527	1531 aa		30.16	■■■□□ 2.42
CIRBP-238	ENST00000592412	TRAPPC8	Q9Y2L5	1435 aa		30.14	■■■□□ 2.42
CIRBP-238	ENST00000592412	CCDC18	Q5T9S5	1454 aa		30.12	■■■□□ 2.41
CIRBP-238	ENST00000592412	ITSN2	Q9NZM3	1697 aa		30.11	■■■□□ 2.41
CIRBP-238	ENST00000592412	CERK	Q8TCT0	537 aa		30.11	■■■□□ 2.41
CIRBP-238	ENST00000592412	STRC	Q7RTU9	1775 aa		30.09	■■■□□ 2.41
CIRBP-238	ENST00000592412	CDC42BPA	Q5VT25	1732 aa		30.08	■■■□□ 2.41
CIRBP-238	ENST00000592412	AGL	P35573	1532 aa		30.07	■■■□□ 2.4
CIRBP-238	ENST00000592412	MYT1L	Q9UL68	1186 aa		30.06	■■■□□ 2.4
CIRBP-238	ENST00000592412	KIDINS220	Q9ULH0	1771 aa		30.05	■■■□□ 2.4
CIRBP-238	ENST00000592412	C3	P01024	1663 aa		30.05	■■■□□ 2.4
CIRBP-238	ENST00000592412	UHRF1BP1	Q6BDS2	1440 aa		30.04	■■■□□ 2.4
CIRBP-238	ENST00000592412	FYCO1	Q9BQS8	1478 aa		30.02	■■■□□ 2.4
CIRBP-238	ENST00000592412	SETD1B	Q9UPS6	1966 aa	Known RBP	30	■■■□□ 2.39
CIRBP-238	ENST00000592412	SAMD9L	Q8IVG5	1584 aa		29.98	■■■□□ 2.39
CIRBP-238	ENST00000592412	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.94	■■■□□ 2.38
CIRBP-238	ENST00000592412	SYCP2	Q9BX26	1530 aa		29.93	■■■□□ 2.38
CIRBP-238	ENST00000592412	DMRT2	Q9Y5R5	561 aa		29.9	■■■□□ 2.38
CIRBP-238	ENST00000592412	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.88	■■■□□ 2.37
CIRBP-238	ENST00000592412	CNTLN	Q9NXG0	1405 aa		29.88	■■■□□ 2.37
CIRBP-238	ENST00000592412	PTPRT	O14522	1441 aa		29.87	■■■□□ 2.37
CIRBP-238	ENST00000592412	ESF1	Q9H501	851 aa	Known RBP	29.85	■■■□□ 2.37
CIRBP-238	ENST00000592412	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.84	■■■□□ 2.37
CIRBP-238	ENST00000592412	MROH2A	A6NES4	1674 aa		29.83	■■■□□ 2.37
CIRBP-238	ENST00000592412	INO80	Q9ULG1	1556 aa	Predicted RBP	29.82	■■■□□ 2.36
CIRBP-238	ENST00000592412	SPAG9	O60271	1321 aa	Known RBP	29.82	■■■□□ 2.36
CIRBP-238	ENST00000592412	PLXNC1	O60486	1568 aa		29.81	■■■□□ 2.36
CIRBP-238	ENST00000592412	ATP7A	Q04656	1500 aa		29.81	■■■□□ 2.36
CIRBP-238	ENST00000592412	NCOA1	Q15788	1441 aa		29.81	■■■□□ 2.36
CIRBP-238	ENST00000592412	KIAA1107	Q9UPP5	1409 aa		29.81	■■■□□ 2.36
CIRBP-238	ENST00000592412	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.8	■■■□□ 2.36
CIRBP-238	ENST00000592412	LTBP4	Q8N2S1	1624 aa		29.79	■■■□□ 2.36
CIRBP-238	ENST00000592412	NPAT	Q14207	1427 aa		29.79	■■■□□ 2.36
CIRBP-238	ENST00000592412	ZMYM3	Q14202	1370 aa		29.77	■■■□□ 2.36
CIRBP-238	ENST00000592412	PLEKHH2	Q8IVE3	1493 aa		29.75	■■■□□ 2.35
CIRBP-238	ENST00000592412	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.75	■■■□□ 2.35
CIRBP-238	ENST00000592412	CCNB3	Q8WWL7	1395 aa		29.74	■■■□□ 2.35
CIRBP-238	ENST00000592412	A2M	P01023	1474 aa		29.74	■■■□□ 2.35
CIRBP-238	ENST00000592412	CLTC	Q00610	1675 aa	Known RBP	29.73	■■■□□ 2.35
CIRBP-238	ENST00000592412	CAMSAP1	Q5T5Y3	1602 aa		29.73	■■■□□ 2.35
CIRBP-238	ENST00000592412	TIAM1	Q13009	1591 aa		29.7	■■■□□ 2.35
CIRBP-238	ENST00000592412	MTUS2	Q5JR59	1369 aa		29.69	■■■□□ 2.34
CIRBP-238	ENST00000592412	ZNF644	Q9H582	1327 aa	Predicted RBP	29.68	■■■□□ 2.34
CIRBP-238	ENST00000592412	MBD5	Q9P267	1494 aa		29.67	■■■□□ 2.34
CIRBP-238	ENST00000592412	MYO3A	Q8NEV4	1616 aa		29.67	■■■□□ 2.34
CIRBP-238	ENST00000592412	ZNF142	P52746	1687 aa	Predicted RBP	29.66	■■■□□ 2.34
CIRBP-238	ENST00000592412	PTPRK	Q15262	1439 aa		29.66	■■■□□ 2.34
CIRBP-238	ENST00000592412	ADGB	Q8N7X0	1667 aa		29.63	■■■□□ 2.33
CIRBP-238	ENST00000592412	EHBP1L1	Q8N3D4	1523 aa		29.63	■■■□□ 2.33
CIRBP-238	ENST00000592412	IQSEC2	Q5JU85	1478 aa		29.62	■■■□□ 2.33
CIRBP-238	ENST00000592412	GGT6	Q6P531	493 aa		29.61	■■■□□ 2.33
CIRBP-238	ENST00000592412	NCKAP5L	Q9HCH0	1330 aa		29.61	■■■□□ 2.33
CIRBP-238	ENST00000592412	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.6	■■■□□ 2.33
CIRBP-238	ENST00000592412	CEP162	Q5TB80	1403 aa		29.59	■■■□□ 2.33
CIRBP-238	ENST00000592412	PLA2R1	Q13018	1463 aa		29.59	■■■□□ 2.33
CIRBP-238	ENST00000592412	TCOF1	Q13428	1488 aa	Known RBP	29.57	■■■□□ 2.32
CIRBP-238	ENST00000592412	DISP3	Q9P2K9	1392 aa		29.57	■■■□□ 2.32
CIRBP-238	ENST00000592412	ILDR2	Q71H61	639 aa		29.57	■■■□□ 2.32
CIRBP-238	ENST00000592412	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.55	■■■□□ 2.32
CIRBP-238	ENST00000592412	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.54	■■■□□ 2.32
CIRBP-238	ENST00000592412	PPP6R1	Q9UPN7	881 aa		29.53	■■■□□ 2.32
CIRBP-238	ENST00000592412	DHX29	Q7Z478	1369 aa	Known RBP	29.51	■■■□□ 2.31
CIRBP-238	ENST00000592412	PKD2	Q13563	968 aa		29.49	■■■□□ 2.31
CIRBP-238	ENST00000592412	SPATA31D1	Q6ZQQ2	1576 aa		29.47	■■■□□ 2.31
CIRBP-238	ENST00000592412	DNMT1	P26358	1616 aa	Known RBP	29.47	■■■□□ 2.31
CIRBP-238	ENST00000592412	A2ML1	A8K2U0	1454 aa		29.47	■■■□□ 2.31
CIRBP-238	ENST00000592412	CAMSAP2	Q08AD1	1489 aa		29.46	■■■□□ 2.31
CIRBP-238	ENST00000592412	NCOA2	Q15596	1464 aa		29.46	■■■□□ 2.31
CIRBP-238	ENST00000592412	CCDC141	Q6ZP82	1450 aa		29.46	■■■□□ 2.31

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