RNA–Protein interactions for RNA: ENST00000592323.5

GRN-219, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-219ENST00000592323 NEO1Q92859 1461 aa24.04■■□□□ 1.44
GRN-219ENST00000592323 BCORL1Q5H9F3 1711 aa24.04■■□□□ 1.44
GRN-219ENST00000592323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.01■■□□□ 1.43
GRN-219ENST00000592323 FRMPD1Q5SYB0 1578 aa24.01■■□□□ 1.43
GRN-219ENST00000592323 RAPGEF3O95398 923 aa24■■□□□ 1.43
GRN-219ENST00000592323 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
GRN-219ENST00000592323 MADDQ8WXG6 1647 aa23.98■■□□□ 1.43
GRN-219ENST00000592323 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
GRN-219ENST00000592323 LMTK3Q96Q04 1460 aa23.94■■□□□ 1.42
GRN-219ENST00000592323 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
GRN-219ENST00000592323 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
GRN-219ENST00000592323 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
GRN-219ENST00000592323 CDC42BPAQ5VT25 1732 aa23.9■■□□□ 1.42
GRN-219ENST00000592323 RICTORQ6R327 1708 aa23.9■■□□□ 1.42
GRN-219ENST00000592323 ARHGEF40Q8TER5 1519 aa23.9■■□□□ 1.42
GRN-219ENST00000592323 PLCH2O75038 1416 aa23.9■■□□□ 1.42
GRN-219ENST00000592323 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.42
GRN-219ENST00000592323 PREX2Q70Z35 1606 aa23.88■■□□□ 1.41
GRN-219ENST00000592323 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
GRN-219ENST00000592323 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
GRN-219ENST00000592323 RIMS1Q86UR5 1692 aaKnown RBP23.86■■□□□ 1.41
GRN-219ENST00000592323 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
GRN-219ENST00000592323 FGD6Q6ZV73 1430 aa23.84■■□□□ 1.41
GRN-219ENST00000592323 CDC42BPBQ9Y5S2 1711 aa23.84■■□□□ 1.41
GRN-219ENST00000592323 DENND4BO75064 1496 aaPredicted RBP23.83■■□□□ 1.41
GRN-219ENST00000592323 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
GRN-219ENST00000592323 CFAP74Q9C0B2 1584 aa23.81■■□□□ 1.4
GRN-219ENST00000592323 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
GRN-219ENST00000592323 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
GRN-219ENST00000592323 ZMYM4Q5VZL5 1548 aa23.79■■□□□ 1.4
GRN-219ENST00000592323 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
GRN-219ENST00000592323 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
GRN-219ENST00000592323 SIGLEC1Q9BZZ2 1709 aa23.78■■□□□ 1.4
GRN-219ENST00000592323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.44e-11■■■■■ 30.2
GRN-219ENST00000592323 FANCAO15360 1455 aa23.77■■□□□ 1.4
GRN-219ENST00000592323 EFCAB2Q5VUJ9 269 aa23.77■■□□□ 1.4
GRN-219ENST00000592323 PTPN23Q9H3S7 1636 aa23.76■■□□□ 1.39
GRN-219ENST00000592323 POGZQ7Z3K3 1410 aa23.74■■□□□ 1.39
GRN-219ENST00000592323 SAMD9LQ8IVG5 1584 aa23.74■■□□□ 1.39
GRN-219ENST00000592323 MAGI2Q86UL8 1455 aa23.73■■□□□ 1.39
GRN-219ENST00000592323 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
GRN-219ENST00000592323 PLEKHH2Q8IVE3 1493 aa23.72■■□□□ 1.39
GRN-219ENST00000592323 ZFYVE16Q7Z3T8 1539 aa23.72■■□□□ 1.39
GRN-219ENST00000592323 KIAA1107Q9UPP5 1409 aa23.71■■□□□ 1.39
GRN-219ENST00000592323 HSPA2P54652 639 aa23.71■■□□□ 1.39
GRN-219ENST00000592323 YEATS2Q9ULM3 1422 aa23.7■■□□□ 1.38
GRN-219ENST00000592323 ZNF644Q9H582 1327 aaPredicted RBP23.69■■□□□ 1.38
GRN-219ENST00000592323 FER1L4A9Z1Z3 1794 aa23.69■■□□□ 1.38
GRN-219ENST00000592323 ABCC1P33527 1531 aa23.69■■□□□ 1.38
GRN-219ENST00000592323 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
GRN-219ENST00000592323 MBD5Q9P267 1494 aa23.66■■□□□ 1.38
GRN-219ENST00000592323 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.38
GRN-219ENST00000592323 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
GRN-219ENST00000592323 CERKQ8TCT0 537 aa23.63■■□□□ 1.37
GRN-219ENST00000592323 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
GRN-219ENST00000592323 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
GRN-219ENST00000592323 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
GRN-219ENST00000592323 RSPH4AQ5TD94 716 aa23.61■■□□□ 1.37
GRN-219ENST00000592323 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
GRN-219ENST00000592323 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
GRN-219ENST00000592323 PREX1Q8TCU6 1659 aa23.59■■□□□ 1.37
GRN-219ENST00000592323 ABCC5O15440 1437 aa23.58■■□□□ 1.36
GRN-219ENST00000592323 CCDC141Q6ZP82 1450 aa23.57■■□□□ 1.36
GRN-219ENST00000592323 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.36
GRN-219ENST00000592323 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
GRN-219ENST00000592323 DAPK1P53355 1430 aa23.57■■□□□ 1.36
GRN-219ENST00000592323 ATP10AO60312 1499 aa23.56■■□□□ 1.36
GRN-219ENST00000592323 TRAPPC8Q9Y2L5 1435 aa23.56■■□□□ 1.36
GRN-219ENST00000592323 MLECQ14165 292 aa23.55■■□□□ 1.36
GRN-219ENST00000592323 SHANK2Q9UPX8 1470 aa23.54■■□□□ 1.36
GRN-219ENST00000592323 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
GRN-219ENST00000592323 C9orf84Q5VXU9 1444 aa23.53■■□□□ 1.36
GRN-219ENST00000592323 CROCC2H7BZ55 1655 aa23.53■■□□□ 1.36
GRN-219ENST00000592323 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
GRN-219ENST00000592323 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
GRN-219ENST00000592323 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
GRN-219ENST00000592323 KDM5CP41229 1560 aa23.52■■□□□ 1.36
GRN-219ENST00000592323 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
GRN-219ENST00000592323 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
GRN-219ENST00000592323 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
GRN-219ENST00000592323 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
GRN-219ENST00000592323 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
GRN-219ENST00000592323 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
GRN-219ENST00000592323 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
GRN-219ENST00000592323 ROCK1Q13464 1354 aa23.45■■□□□ 1.34
GRN-219ENST00000592323 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
GRN-219ENST00000592323 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
GRN-219ENST00000592323 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
GRN-219ENST00000592323 REREQ9P2R6 1566 aa23.43■■□□□ 1.34
GRN-219ENST00000592323 SPAG9O60271 1321 aaKnown RBP23.42■■□□□ 1.34
GRN-219ENST00000592323 ITGAEP38570 1179 aa23.42■■□□□ 1.34
GRN-219ENST00000592323 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
GRN-219ENST00000592323 ATP7AQ04656 1500 aa23.4■■□□□ 1.34
GRN-219ENST00000592323 NCOA1Q15788 1441 aa23.4■■□□□ 1.34
GRN-219ENST00000592323 UHRF1BP1Q6BDS2 1440 aa23.4■■□□□ 1.34
GRN-219ENST00000592323 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
GRN-219ENST00000592323 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
GRN-219ENST00000592323 KIDINS220Q9ULH0 1771 aa23.39■■□□□ 1.33
GRN-219ENST00000592323 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
GRN-219ENST00000592323 C3P01024 1663 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms