RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 FANCAO15360 1455 aa15.29■□□□□ 0.04
TPM4-215ENST00000592138 APLP2Q06481 763 aa15.28■□□□□ 0.04
TPM4-215ENST00000592138 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
TPM4-215ENST00000592138 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
TPM4-215ENST00000592138 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
TPM4-215ENST00000592138 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
TPM4-215ENST00000592138 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
TPM4-215ENST00000592138 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
TPM4-215ENST00000592138 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
TPM4-215ENST00000592138 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
TPM4-215ENST00000592138 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
TPM4-215ENST00000592138 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
TPM4-215ENST00000592138 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
TPM4-215ENST00000592138 CDC42BPAQ5VT25 1732 aa15.21■□□□□ 0.03
TPM4-215ENST00000592138 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
TPM4-215ENST00000592138 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
TPM4-215ENST00000592138 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
TPM4-215ENST00000592138 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
TPM4-215ENST00000592138 ABCC1P33527 1531 aa15.17■□□□□ 0.02
TPM4-215ENST00000592138 PLEKHH2Q8IVE3 1493 aa15.17■□□□□ 0.02
TPM4-215ENST00000592138 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
TPM4-215ENST00000592138 SCAPERQ9BY12 1400 aa15.17■□□□□ 0.02
TPM4-215ENST00000592138 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
TPM4-215ENST00000592138 MIA2Q96PC5 1412 aa15.16■□□□□ 0.02
TPM4-215ENST00000592138 FRMPD1Q5SYB0 1578 aa15.15■□□□□ 0.02
TPM4-215ENST00000592138 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
TPM4-215ENST00000592138 MYOM3Q5VTT5 1437 aa15.15■□□□□ 0.02
TPM4-215ENST00000592138 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
TPM4-215ENST00000592138 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
TPM4-215ENST00000592138 ZMYM4Q5VZL5 1548 aa15.14■□□□□ 0.01
TPM4-215ENST00000592138 RICTORQ6R327 1708 aa15.14■□□□□ 0.01
TPM4-215ENST00000592138 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
TPM4-215ENST00000592138 KDM5CP41229 1560 aa15.12■□□□□ 0.01
TPM4-215ENST00000592138 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
TPM4-215ENST00000592138 ARHGEF12Q9NZN5 1544 aa15.11■□□□□ 0.01
TPM4-215ENST00000592138 SYCP2Q9BX26 1530 aa15.1■□□□□ 0.01
TPM4-215ENST00000592138 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
TPM4-215ENST00000592138 ZNF777Q9ULD5 760 aaPredicted RBP15.09■□□□□ 0.01
TPM4-215ENST00000592138 MBD5Q9P267 1494 aa15.08■□□□□ 0.01
TPM4-215ENST00000592138 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
TPM4-215ENST00000592138 TRAPPC8Q9Y2L5 1435 aa15.08■□□□□ 0
TPM4-215ENST00000592138 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
TPM4-215ENST00000592138 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
TPM4-215ENST00000592138 ARHGEF40Q8TER5 1519 aa15.07■□□□□ 0
TPM4-215ENST00000592138 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
TPM4-215ENST00000592138 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
TPM4-215ENST00000592138 ARHGEF5Q12774 1597 aa15.06■□□□□ 0
TPM4-215ENST00000592138 AFAP1Q8N556 730 aa15.05■□□□□ -0
TPM4-215ENST00000592138 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
TPM4-215ENST00000592138 CCDC141Q6ZP82 1450 aa15.04■□□□□ -0
TPM4-215ENST00000592138 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
TPM4-215ENST00000592138 PTPN23Q9H3S7 1636 aa15.03■□□□□ -0
TPM4-215ENST00000592138 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
TPM4-215ENST00000592138 YEATS2Q9ULM3 1422 aa15.01□□□□□ -0.01
TPM4-215ENST00000592138 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
TPM4-215ENST00000592138 INO80Q9ULG1 1556 aaPredicted RBP15.01□□□□□ -0.01
TPM4-215ENST00000592138 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
TPM4-215ENST00000592138 REREQ9P2R6 1566 aa15□□□□□ -0.01
TPM4-215ENST00000592138 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
TPM4-215ENST00000592138 ATP10AO60312 1499 aa14.99□□□□□ -0.01
TPM4-215ENST00000592138 C9orf84Q5VXU9 1444 aa14.99□□□□□ -0.01
TPM4-215ENST00000592138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM4-215ENST00000592138 DIP2CQ9Y2E4 1556 aa14.98□□□□□ -0.01
TPM4-215ENST00000592138 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
TPM4-215ENST00000592138 KIDINS220Q9ULH0 1771 aa14.98□□□□□ -0.01
TPM4-215ENST00000592138 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
TPM4-215ENST00000592138 ABCA6Q8N139 1617 aa14.96□□□□□ -0.01
TPM4-215ENST00000592138 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
TPM4-215ENST00000592138 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
TPM4-215ENST00000592138 RRBP1Q9P2E9 1410 aaKnown RBP14.96□□□□□ -0.01
TPM4-215ENST00000592138 DNMT1P26358 1616 aaKnown RBP14.95□□□□□ -0.02
TPM4-215ENST00000592138 ABCC5O15440 1437 aa14.95□□□□□ -0.02
TPM4-215ENST00000592138 DAPK1P53355 1430 aa14.95□□□□□ -0.02
TPM4-215ENST00000592138 AGLP35573 1532 aa14.94□□□□□ -0.02
TPM4-215ENST00000592138 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
TPM4-215ENST00000592138 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
TPM4-215ENST00000592138 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
TPM4-215ENST00000592138 PLXNC1O60486 1568 aa14.92□□□□□ -0.02
TPM4-215ENST00000592138 CROCC2H7BZ55 1655 aa14.92□□□□□ -0.02
TPM4-215ENST00000592138 A2MP01023 1474 aa14.91□□□□□ -0.02
TPM4-215ENST00000592138 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
TPM4-215ENST00000592138 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
TPM4-215ENST00000592138 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
TPM4-215ENST00000592138 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
TPM4-215ENST00000592138 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
TPM4-215ENST00000592138 PTPRMP28827 1452 aa14.88□□□□□ -0.03
TPM4-215ENST00000592138 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
TPM4-215ENST00000592138 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
TPM4-215ENST00000592138 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
TPM4-215ENST00000592138 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
TPM4-215ENST00000592138 NCOA1Q15788 1441 aa14.85□□□□□ -0.03
TPM4-215ENST00000592138 DUOX2Q9NRD8 1548 aa14.85□□□□□ -0.03
TPM4-215ENST00000592138 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
TPM4-215ENST00000592138 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
TPM4-215ENST00000592138 ERBINQ96RT1 1412 aa14.83□□□□□ -0.03
TPM4-215ENST00000592138 PTPRKQ15262 1439 aa14.83□□□□□ -0.04
TPM4-215ENST00000592138 MADDQ8WXG6 1647 aa14.82□□□□□ -0.04
TPM4-215ENST00000592138 EIF2AK4Q9P2K8 1649 aaKnown RBP14.82□□□□□ -0.04
TPM4-215ENST00000592138 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
TPM4-215ENST00000592138 FAM135AQ9P2D6 1515 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms