RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TEX14Q8IWB6 1497 aa28.26■■■□□ 2.12
CROCCP3-205ENST00000591316 PPRC1Q5VV67 1664 aaKnown RBP28.25■■■□□ 2.11
CROCCP3-205ENST00000591316 CDC42BPAQ5VT25 1732 aa28.24■■■□□ 2.11
CROCCP3-205ENST00000591316 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
CROCCP3-205ENST00000591316 MYOM3Q5VTT5 1437 aa28.22■■■□□ 2.11
CROCCP3-205ENST00000591316 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
CROCCP3-205ENST00000591316 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
CROCCP3-205ENST00000591316 PREX2Q70Z35 1606 aa28.2■■■□□ 2.11
CROCCP3-205ENST00000591316 ARAP3Q8WWN8 1544 aa28.18■■■□□ 2.1
CROCCP3-205ENST00000591316 NEO1Q92859 1461 aa28.17■■■□□ 2.1
CROCCP3-205ENST00000591316 HNRNPMP52272 730 aaKnown RBP eCLIP28.17■■■□□ 2.1
CROCCP3-205ENST00000591316 ITSN2Q9NZM3 1697 aa28.15■■■□□ 2.1
CROCCP3-205ENST00000591316 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.1
CROCCP3-205ENST00000591316 RAPGEF3O95398 923 aa28.14■■■□□ 2.1
CROCCP3-205ENST00000591316 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.1
CROCCP3-205ENST00000591316 MIA2Q96PC5 1412 aa28.13■■■□□ 2.09
CROCCP3-205ENST00000591316 ADGRL1O94910 1474 aa28.12■■■□□ 2.09
CROCCP3-205ENST00000591316 FGD6Q6ZV73 1430 aa28.12■■■□□ 2.09
CROCCP3-205ENST00000591316 COL17A1Q9UMD9 1497 aaPredicted RBP28.1■■■□□ 2.09
CROCCP3-205ENST00000591316 CFAP74Q9C0B2 1584 aa28.09■■■□□ 2.09
CROCCP3-205ENST00000591316 SAMD9LQ8IVG5 1584 aa28.09■■■□□ 2.09
CROCCP3-205ENST00000591316 AFAP1Q8N556 730 aa28.08■■■□□ 2.09
CROCCP3-205ENST00000591316 CAMSAP2Q08AD1 1489 aa28.06■■■□□ 2.08
CROCCP3-205ENST00000591316 ARHGEF12Q9NZN5 1544 aa28.05■■■□□ 2.08
CROCCP3-205ENST00000591316 DENND4BO75064 1496 aaPredicted RBP28.05■■■□□ 2.08
CROCCP3-205ENST00000591316 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
CROCCP3-205ENST00000591316 PLEKHH2Q8IVE3 1493 aa28.03■■■□□ 2.08
CROCCP3-205ENST00000591316 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
CROCCP3-205ENST00000591316 KDM6BO15054 1643 aa28.02■■■□□ 2.08
CROCCP3-205ENST00000591316 KIAA1107Q9UPP5 1409 aa28.02■■■□□ 2.08
CROCCP3-205ENST00000591316 TRAPPC8Q9Y2L5 1435 aa28.02■■■□□ 2.08
CROCCP3-205ENST00000591316 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.08
CROCCP3-205ENST00000591316 ABCC1P33527 1531 aa28.01■■■□□ 2.07
CROCCP3-205ENST00000591316 ITGAEP38570 1179 aa28■■■□□ 2.07
CROCCP3-205ENST00000591316 RSPH4AQ5TD94 716 aa27.98■■■□□ 2.07
CROCCP3-205ENST00000591316 MBD5Q9P267 1494 aa27.97■■■□□ 2.07
CROCCP3-205ENST00000591316 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
CROCCP3-205ENST00000591316 TSPY4P0CV99 314 aa27.95■■■□□ 2.07
CROCCP3-205ENST00000591316 TSPY10P0CW01 314 aa27.95■■■□□ 2.07
CROCCP3-205ENST00000591316 POGZQ7Z3K3 1410 aa27.95■■■□□ 2.07
CROCCP3-205ENST00000591316 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
CROCCP3-205ENST00000591316 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
CROCCP3-205ENST00000591316 SPAG9O60271 1321 aaKnown RBP27.92■■■□□ 2.06
CROCCP3-205ENST00000591316 CHIC2Q9UKJ5 165 aa27.91■■■□□ 2.06
CROCCP3-205ENST00000591316 ABCC5O15440 1437 aa27.88■■■□□ 2.05
CROCCP3-205ENST00000591316 CCDC141Q6ZP82 1450 aa27.88■■■□□ 2.05
CROCCP3-205ENST00000591316 RICTORQ6R327 1708 aa27.88■■■□□ 2.05
CROCCP3-205ENST00000591316 FRMPD1Q5SYB0 1578 aa27.87■■■□□ 2.05
CROCCP3-205ENST00000591316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.86■■■□□ 2.05
CROCCP3-205ENST00000591316 DAPK1P53355 1430 aa27.85■■■□□ 2.05
CROCCP3-205ENST00000591316 ARHGEF5Q12774 1597 aa27.84■■■□□ 2.05
CROCCP3-205ENST00000591316 KDM5CP41229 1560 aa27.8■■■□□ 2.04
CROCCP3-205ENST00000591316 YEATS2Q9ULM3 1422 aa27.79■■■□□ 2.04
CROCCP3-205ENST00000591316 PTPRKQ15262 1439 aa27.78■■■□□ 2.04
CROCCP3-205ENST00000591316 C9orf84Q5VXU9 1444 aa27.78■■■□□ 2.04
CROCCP3-205ENST00000591316 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
CROCCP3-205ENST00000591316 MLH3Q9UHC1 1453 aa27.78■■■□□ 2.04
CROCCP3-205ENST00000591316 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
CROCCP3-205ENST00000591316 ZMYM4Q5VZL5 1548 aa27.76■■■□□ 2.03
CROCCP3-205ENST00000591316 MAGI2Q86UL8 1455 aa27.75■■■□□ 2.03
CROCCP3-205ENST00000591316 RTEL1-TNFRSF6BF6WH68 1400 aa27.74■■■□□ 2.03
CROCCP3-205ENST00000591316 HECW2Q9P2P5 1572 aa27.74■■■□□ 2.03
CROCCP3-205ENST00000591316 ATP7AQ04656 1500 aa27.73■■■□□ 2.03
CROCCP3-205ENST00000591316 ZFYVE16Q7Z3T8 1539 aa27.73■■■□□ 2.03
CROCCP3-205ENST00000591316 KIDINS220Q9ULH0 1771 aa27.71■■■□□ 2.03
CROCCP3-205ENST00000591316 TRIM26Q12899 539 aaPredicted RBP27.7■■■□□ 2.03
CROCCP3-205ENST00000591316 ANKRD30AQ9BXX3 1397 aa27.69■■■□□ 2.02
CROCCP3-205ENST00000591316 SHANK2Q9UPX8 1470 aa27.68■■■□□ 2.02
CROCCP3-205ENST00000591316 ARID4BQ4LE39 1312 aaPredicted RBP27.68■■■□□ 2.02
CROCCP3-205ENST00000591316 ATP10AO60312 1499 aa27.68■■■□□ 2.02
CROCCP3-205ENST00000591316 INO80Q9ULG1 1556 aaPredicted RBP27.67■■■□□ 2.02
CROCCP3-205ENST00000591316 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
CROCCP3-205ENST00000591316 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
CROCCP3-205ENST00000591316 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
CROCCP3-205ENST00000591316 KIF15Q9NS87 1388 aa27.64■■■□□ 2.02
CROCCP3-205ENST00000591316 ABCA6Q8N139 1617 aa27.64■■■□□ 2.01
CROCCP3-205ENST00000591316 DIP2CQ9Y2E4 1556 aa27.63■■■□□ 2.01
CROCCP3-205ENST00000591316 ARHGEF40Q8TER5 1519 aa27.61■■■□□ 2.01
CROCCP3-205ENST00000591316 DHX29Q7Z478 1369 aaKnown RBP27.61■■■□□ 2.01
CROCCP3-205ENST00000591316 A2MP01023 1474 aa27.61■■■□□ 2.01
CROCCP3-205ENST00000591316 MLECQ14165 292 aa27.6■■■□□ 2.01
CROCCP3-205ENST00000591316 ROCK1Q13464 1354 aa27.59■■■□□ 2.01
CROCCP3-205ENST00000591316 ADGRL2O95490 1459 aa27.58■■■□□ 2.01
CROCCP3-205ENST00000591316 KIF3BO15066 747 aa27.57■■■□□ 2
CROCCP3-205ENST00000591316 PLXNC1O60486 1568 aa27.54■■■□□ 2
CROCCP3-205ENST00000591316 ADGBQ8N7X0 1667 aa27.54■■■□□ 2
CROCCP3-205ENST00000591316 GGT6Q6P531 493 aa27.53■■■□□ 2
CROCCP3-205ENST00000591316 DUOX2Q9NRD8 1548 aa27.52■■■□□ 2
CROCCP3-205ENST00000591316 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
CROCCP3-205ENST00000591316 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
CROCCP3-205ENST00000591316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.48■■□□□ 1.99
CROCCP3-205ENST00000591316 NAIPQ13075 1403 aa27.48■■□□□ 1.99
CROCCP3-205ENST00000591316 SIGLEC1Q9BZZ2 1709 aa27.48■■□□□ 1.99
CROCCP3-205ENST00000591316 REREQ9P2R6 1566 aa27.46■■□□□ 1.99
CROCCP3-205ENST00000591316 HFM1A2PYH4 1435 aa27.45■■□□□ 1.99
CROCCP3-205ENST00000591316 ERBINQ96RT1 1412 aa27.44■■□□□ 1.98
CROCCP3-205ENST00000591316 AGLP35573 1532 aa27.42■■□□□ 1.98
CROCCP3-205ENST00000591316 SETD5Q9C0A6 1442 aa27.4■■□□□ 1.98
CROCCP3-205ENST00000591316 ESF1Q9H501 851 aaKnown RBP27.39■■□□□ 1.97
CROCCP3-205ENST00000591316 TRIM52Q96A61 297 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms