RNA–Protein interactions for RNA: ENST00000591265.1

ZNF554-204, Transcript of zinc finger protein 554, humanhuman

TSL 5 BASIC

Gene ZNF554, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-204ENST00000591265 HECW1Q76N89 1606 aa29.25■■■□□ 2.27
ZNF554-204ENST00000591265 EFCAB2Q5VUJ9 269 aa29.25■■■□□ 2.27
ZNF554-204ENST00000591265 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
ZNF554-204ENST00000591265 SIGLEC1Q9BZZ2 1709 aa29.19■■■□□ 2.26
ZNF554-204ENST00000591265 ATP10AO60312 1499 aa29.18■■■□□ 2.26
ZNF554-204ENST00000591265 ARHGAP35Q9NRY4 1499 aa29.18■■■□□ 2.26
ZNF554-204ENST00000591265 HSPA2P54652 639 aa29.16■■■□□ 2.26
ZNF554-204ENST00000591265 MLECQ14165 292 aa29.16■■■□□ 2.26
ZNF554-204ENST00000591265 C9orf84Q5VXU9 1444 aa29.15■■■□□ 2.26
ZNF554-204ENST00000591265 PLPPR3Q6T4P5 718 aa29.14■■■□□ 2.26
ZNF554-204ENST00000591265 MYO5CQ9NQX4 1742 aa29.13■■■□□ 2.25
ZNF554-204ENST00000591265 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
ZNF554-204ENST00000591265 ARHGEF12Q9NZN5 1544 aa29.11■■■□□ 2.25
ZNF554-204ENST00000591265 ZNF518AQ6AHZ1 1483 aa29.1■■■□□ 2.25
ZNF554-204ENST00000591265 EHMT2Q96KQ7 1210 aa29.1■■■□□ 2.25
ZNF554-204ENST00000591265 FER1L4A9Z1Z3 1794 aa29.1■■■□□ 2.25
ZNF554-204ENST00000591265 KIF14Q15058 1648 aa29.09■■■□□ 2.25
ZNF554-204ENST00000591265 CLIP1P30622 1438 aa29.09■■■□□ 2.25
ZNF554-204ENST00000591265 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
ZNF554-204ENST00000591265 AFAP1Q8N556 730 aa29.04■■■□□ 2.24
ZNF554-204ENST00000591265 KDM5CP41229 1560 aa29.03■■■□□ 2.24
ZNF554-204ENST00000591265 CERKQ8TCT0 537 aa28.98■■■□□ 2.23
ZNF554-204ENST00000591265 CEBPAP49715 358 aaPredicted RBP28.96■■■□□ 2.23
ZNF554-204ENST00000591265 MLH3Q9UHC1 1453 aa28.96■■■□□ 2.23
ZNF554-204ENST00000591265 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
ZNF554-204ENST00000591265 MYT1LQ9UL68 1186 aa28.95■■■□□ 2.22
ZNF554-204ENST00000591265 PREX1Q8TCU6 1659 aa28.95■■■□□ 2.22
ZNF554-204ENST00000591265 CCDC18Q5T9S5 1454 aa28.93■■■□□ 2.22
ZNF554-204ENST00000591265 DMRT2Q9Y5R5 561 aa28.93■■■□□ 2.22
ZNF554-204ENST00000591265 CASKIN1Q8WXD9 1431 aa28.93■■■□□ 2.22
ZNF554-204ENST00000591265 DIP2CQ9Y2E4 1556 aa28.92■■■□□ 2.22
ZNF554-204ENST00000591265 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
ZNF554-204ENST00000591265 CDC42BPBQ9Y5S2 1711 aa28.9■■■□□ 2.22
ZNF554-204ENST00000591265 UHRF1BP1Q6BDS2 1440 aa28.88■■■□□ 2.21
ZNF554-204ENST00000591265 AGLP35573 1532 aa28.87■■■□□ 2.21
ZNF554-204ENST00000591265 PREX2Q70Z35 1606 aa28.87■■■□□ 2.21
ZNF554-204ENST00000591265 ABCC1P33527 1531 aa28.86■■■□□ 2.21
ZNF554-204ENST00000591265 TRAPPC8Q9Y2L5 1435 aa28.86■■■□□ 2.21
ZNF554-204ENST00000591265 SETD1BQ9UPS6 1966 aaKnown RBP28.84■■■□□ 2.21
ZNF554-204ENST00000591265 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
ZNF554-204ENST00000591265 ESF1Q9H501 851 aaKnown RBP28.83■■■□□ 2.21
ZNF554-204ENST00000591265 ITSN2Q9NZM3 1697 aa28.78■■■□□ 2.2
ZNF554-204ENST00000591265 FYCO1Q9BQS8 1478 aa28.78■■■□□ 2.2
ZNF554-204ENST00000591265 STRCQ7RTU9 1775 aa28.78■■■□□ 2.2
ZNF554-204ENST00000591265 CNTLNQ9NXG0 1405 aa28.77■■■□□ 2.2
ZNF554-204ENST00000591265 C3P01024 1663 aa28.74■■■□□ 2.19
ZNF554-204ENST00000591265 PTPRTO14522 1441 aa28.74■■■□□ 2.19
ZNF554-204ENST00000591265 KIDINS220Q9ULH0 1771 aa28.73■■■□□ 2.19
ZNF554-204ENST00000591265 CDC42BPAQ5VT25 1732 aa28.73■■■□□ 2.19
ZNF554-204ENST00000591265 SAMD9LQ8IVG5 1584 aa28.69■■■□□ 2.18
ZNF554-204ENST00000591265 GPATCH8Q9UKJ3 1502 aaKnown RBP28.69■■■□□ 2.18
ZNF554-204ENST00000591265 ZNF777Q9ULD5 760 aaPredicted RBP28.68■■■□□ 2.18
ZNF554-204ENST00000591265 SPAG9O60271 1321 aaKnown RBP28.67■■■□□ 2.18
ZNF554-204ENST00000591265 KIAA1107Q9UPP5 1409 aa28.66■■■□□ 2.18
ZNF554-204ENST00000591265 NPATQ14207 1427 aa28.65■■■□□ 2.18
ZNF554-204ENST00000591265 HNRNPMP52272 730 aaKnown RBP eCLIP28.63■■■□□ 2.17
ZNF554-204ENST00000591265 PLEKHH2Q8IVE3 1493 aa28.63■■■□□ 2.17
ZNF554-204ENST00000591265 SYCP2Q9BX26 1530 aa28.62■■■□□ 2.17
ZNF554-204ENST00000591265 CFDP1Q9UEE9 299 aaPredicted RBP28.61■■■□□ 2.17
ZNF554-204ENST00000591265 ZMYM3Q14202 1370 aa28.61■■■□□ 2.17
ZNF554-204ENST00000591265 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
ZNF554-204ENST00000591265 MROH2AA6NES4 1674 aa28.59■■■□□ 2.17
ZNF554-204ENST00000591265 CCNB3Q8WWL7 1395 aa28.57■■■□□ 2.16
ZNF554-204ENST00000591265 ATP7AQ04656 1500 aa28.56■■■□□ 2.16
ZNF554-204ENST00000591265 A2MP01023 1474 aa28.53■■■□□ 2.16
ZNF554-204ENST00000591265 IQSEC2Q5JU85 1478 aa28.53■■■□□ 2.16
ZNF554-204ENST00000591265 PPP6R1Q9UPN7 881 aa28.53■■■□□ 2.16
ZNF554-204ENST00000591265 LTBP4Q8N2S1 1624 aa28.53■■■□□ 2.16
ZNF554-204ENST00000591265 MTUS2Q5JR59 1369 aa28.52■■■□□ 2.16
ZNF554-204ENST00000591265 PLXNC1O60486 1568 aa28.52■■■□□ 2.16
ZNF554-204ENST00000591265 INO80Q9ULG1 1556 aaPredicted RBP28.51■■■□□ 2.15
ZNF554-204ENST00000591265 SUPT6HQ7KZ85 1726 aaKnown RBP28.5■■■□□ 2.15
ZNF554-204ENST00000591265 CAMSAP1Q5T5Y3 1602 aa28.5■■■□□ 2.15
ZNF554-204ENST00000591265 DISP3Q9P2K9 1392 aa28.46■■■□□ 2.15
ZNF554-204ENST00000591265 PKD2Q13563 968 aa28.45■■■□□ 2.14
ZNF554-204ENST00000591265 GGT6Q6P531 493 aa28.45■■■□□ 2.14
ZNF554-204ENST00000591265 PTPRKQ15262 1439 aa28.44■■■□□ 2.14
ZNF554-204ENST00000591265 CLTCQ00610 1675 aaKnown RBP28.43■■■□□ 2.14
ZNF554-204ENST00000591265 PLA2R1Q13018 1463 aa28.43■■■□□ 2.14
ZNF554-204ENST00000591265 RTEL1-TNFRSF6BF6WH68 1400 aa28.42■■■□□ 2.14
ZNF554-204ENST00000591265 NCKAP5LQ9HCH0 1330 aa28.42■■■□□ 2.14
ZNF554-204ENST00000591265 MBD5Q9P267 1494 aa28.4■■■□□ 2.14
ZNF554-204ENST00000591265 ADGBQ8N7X0 1667 aa28.39■■■□□ 2.14
ZNF554-204ENST00000591265 ZNF644Q9H582 1327 aaPredicted RBP28.39■■■□□ 2.13
ZNF554-204ENST00000591265 ZNF142P52746 1687 aaPredicted RBP28.38■■■□□ 2.13
ZNF554-204ENST00000591265 EHBP1L1Q8N3D4 1523 aa28.38■■■□□ 2.13
ZNF554-204ENST00000591265 TIAM1Q13009 1591 aa28.37■■■□□ 2.13
ZNF554-204ENST00000591265 CEP162Q5TB80 1403 aa28.37■■■□□ 2.13
ZNF554-204ENST00000591265 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
ZNF554-204ENST00000591265 CEP170BQ9Y4F5 1589 aaPredicted RBP28.37■■■□□ 2.13
ZNF554-204ENST00000591265 TCOF1Q13428 1488 aaKnown RBP28.36■■■□□ 2.13
ZNF554-204ENST00000591265 DHX29Q7Z478 1369 aaKnown RBP28.36■■■□□ 2.13
ZNF554-204ENST00000591265 ILDR2Q71H61 639 aa28.34■■■□□ 2.13
ZNF554-204ENST00000591265 ZNF335Q9H4Z2 1342 aaPredicted RBP28.33■■■□□ 2.13
ZNF554-204ENST00000591265 RSPH4AQ5TD94 716 aa28.32■■■□□ 2.12
ZNF554-204ENST00000591265 SOCS7O14512 581 aa28.3■■■□□ 2.12
ZNF554-204ENST00000591265 A2ML1A8K2U0 1454 aa28.28■■■□□ 2.12
ZNF554-204ENST00000591265 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
ZNF554-204ENST00000591265 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
ZNF554-204ENST00000591265 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 344.3 ms