RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 CDC42BPAQ5VT25 1732 aa29■■■□□ 2.23
SPHK1-207ENST00000590959 GLI2P10070 1586 aa28.99■■■□□ 2.23
SPHK1-207ENST00000590959 TCOF1Q13428 1488 aaKnown RBP28.98■■■□□ 2.23
SPHK1-207ENST00000590959 CD109Q6YHK3 1445 aa28.96■■■□□ 2.23
SPHK1-207ENST00000590959 TRHP20396 242 aaPredicted RBP28.95■■■□□ 2.23
SPHK1-207ENST00000590959 CDC42BPBQ9Y5S2 1711 aa28.95■■■□□ 2.23
SPHK1-207ENST00000590959 MAP3K4Q9Y6R4 1608 aa28.94■■■□□ 2.22
SPHK1-207ENST00000590959 PLCH2O75038 1416 aa28.94■■■□□ 2.22
SPHK1-207ENST00000590959 MYO5CQ9NQX4 1742 aa28.94■■■□□ 2.22
SPHK1-207ENST00000590959 CFDP1Q9UEE9 299 aaPredicted RBP28.92■■■□□ 2.22
SPHK1-207ENST00000590959 PREX2Q70Z35 1606 aa28.91■■■□□ 2.22
SPHK1-207ENST00000590959 ZNF644Q9H582 1327 aaPredicted RBP28.9■■■□□ 2.22
SPHK1-207ENST00000590959 TSPOAP1O95153 1857 aa28.9■■■□□ 2.22
SPHK1-207ENST00000590959 ITSN2Q9NZM3 1697 aa28.89■■■□□ 2.22
SPHK1-207ENST00000590959 ZNF777Q9ULD5 760 aaPredicted RBP28.89■■■□□ 2.21
SPHK1-207ENST00000590959 ARHGAP5Q13017 1502 aa28.88■■■□□ 2.21
SPHK1-207ENST00000590959 PPRC1Q5VV67 1664 aaKnown RBP28.84■■■□□ 2.21
SPHK1-207ENST00000590959 SETD5Q9C0A6 1442 aa28.83■■■□□ 2.21
SPHK1-207ENST00000590959 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
SPHK1-207ENST00000590959 FANCAO15360 1455 aa28.82■■■□□ 2.2
SPHK1-207ENST00000590959 EFCAB2Q5VUJ9 269 aa28.81■■■□□ 2.2
SPHK1-207ENST00000590959 ARAP3Q8WWN8 1544 aa28.81■■■□□ 2.2
SPHK1-207ENST00000590959 RAB3GAP2Q9H2M9 1393 aa28.8■■■□□ 2.2
SPHK1-207ENST00000590959 SAMD9LQ8IVG5 1584 aa28.79■■■□□ 2.2
SPHK1-207ENST00000590959 CAMSAP2Q08AD1 1489 aa28.77■■■□□ 2.2
SPHK1-207ENST00000590959 HNRNPMP52272 730 aaKnown RBP eCLIP28.74■■■□□ 2.19
SPHK1-207ENST00000590959 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
SPHK1-207ENST00000590959 AKNAQ7Z591 1439 aa28.73■■■□□ 2.19
SPHK1-207ENST00000590959 ARHGEF12Q9NZN5 1544 aa28.72■■■□□ 2.19
SPHK1-207ENST00000590959 DAPK1P53355 1430 aa28.72■■■□□ 2.19
SPHK1-207ENST00000590959 DNMT1P26358 1616 aaKnown RBP28.71■■■□□ 2.19
SPHK1-207ENST00000590959 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.19
SPHK1-207ENST00000590959 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
SPHK1-207ENST00000590959 NEO1Q92859 1461 aa28.68■■■□□ 2.18
SPHK1-207ENST00000590959 ABCC5O15440 1437 aa28.68■■■□□ 2.18
SPHK1-207ENST00000590959 ABCC1P33527 1531 aa28.68■■■□□ 2.18
SPHK1-207ENST00000590959 ADGRL1O94910 1474 aa28.67■■■□□ 2.18
SPHK1-207ENST00000590959 TEX14Q8IWB6 1497 aa28.67■■■□□ 2.18
SPHK1-207ENST00000590959 MBD5Q9P267 1494 aa28.67■■■□□ 2.18
SPHK1-207ENST00000590959 CHIC2Q9UKJ5 165 aa28.66■■■□□ 2.18
SPHK1-207ENST00000590959 NAIPQ13075 1403 aa28.66■■■□□ 2.18
SPHK1-207ENST00000590959 SCAPERQ9BY12 1400 aa28.66■■■□□ 2.18
SPHK1-207ENST00000590959 CFAP74Q9C0B2 1584 aa28.65■■■□□ 2.18
SPHK1-207ENST00000590959 KIAA1107Q9UPP5 1409 aa28.64■■■□□ 2.18
SPHK1-207ENST00000590959 CLSPNQ9HAW4 1339 aa28.63■■■□□ 2.17
SPHK1-207ENST00000590959 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
SPHK1-207ENST00000590959 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
SPHK1-207ENST00000590959 AFAP1Q8N556 730 aa28.61■■■□□ 2.17
SPHK1-207ENST00000590959 PLEKHH2Q8IVE3 1493 aa28.61■■■□□ 2.17
SPHK1-207ENST00000590959 COL17A1Q9UMD9 1497 aaPredicted RBP28.6■■■□□ 2.17
SPHK1-207ENST00000590959 RAPGEF3O95398 923 aa28.6■■■□□ 2.17
SPHK1-207ENST00000590959 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
SPHK1-207ENST00000590959 GCC2Q8IWJ2 1684 aa28.56■■■□□ 2.16
SPHK1-207ENST00000590959 ARHGEF5Q12774 1597 aa28.55■■■□□ 2.16
SPHK1-207ENST00000590959 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
SPHK1-207ENST00000590959 DENND4BO75064 1496 aaPredicted RBP28.53■■■□□ 2.16
SPHK1-207ENST00000590959 CROCC2H7BZ55 1655 aa28.53■■■□□ 2.16
SPHK1-207ENST00000590959 POGZQ7Z3K3 1410 aa28.52■■■□□ 2.16
SPHK1-207ENST00000590959 RSPH4AQ5TD94 716 aa28.51■■■□□ 2.15
SPHK1-207ENST00000590959 SHANK2Q9UPX8 1470 aa28.51■■■□□ 2.15
SPHK1-207ENST00000590959 RICTORQ6R327 1708 aa28.49■■■□□ 2.15
SPHK1-207ENST00000590959 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
SPHK1-207ENST00000590959 FRMPD1Q5SYB0 1578 aa28.49■■■□□ 2.15
SPHK1-207ENST00000590959 ZNF518AQ6AHZ1 1483 aa28.48■■■□□ 2.15
SPHK1-207ENST00000590959 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
SPHK1-207ENST00000590959 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
SPHK1-207ENST00000590959 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
SPHK1-207ENST00000590959 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
SPHK1-207ENST00000590959 ANKRD30AQ9BXX3 1397 aa28.46■■■□□ 2.15
SPHK1-207ENST00000590959 C9orf84Q5VXU9 1444 aa28.45■■■□□ 2.14
SPHK1-207ENST00000590959 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
SPHK1-207ENST00000590959 SPAG9O60271 1321 aaKnown RBP28.44■■■□□ 2.14
SPHK1-207ENST00000590959 KDM5CP41229 1560 aa28.44■■■□□ 2.14
SPHK1-207ENST00000590959 ACIN1Q9UKV3 1341 aaKnown RBP28.44■■■□□ 2.14
SPHK1-207ENST00000590959 KDM6BO15054 1643 aa28.41■■■□□ 2.14
SPHK1-207ENST00000590959 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
SPHK1-207ENST00000590959 MAST1Q9Y2H9 1570 aa28.38■■■□□ 2.13
SPHK1-207ENST00000590959 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
SPHK1-207ENST00000590959 KIDINS220Q9ULH0 1771 aa28.37■■■□□ 2.13
SPHK1-207ENST00000590959 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
SPHK1-207ENST00000590959 MLH3Q9UHC1 1453 aa28.36■■■□□ 2.13
SPHK1-207ENST00000590959 ATP7AQ04656 1500 aa28.35■■■□□ 2.13
SPHK1-207ENST00000590959 RTEL1-TNFRSF6BF6WH68 1400 aa28.35■■■□□ 2.13
SPHK1-207ENST00000590959 HECW2Q9P2P5 1572 aa28.34■■■□□ 2.13
SPHK1-207ENST00000590959 TRIM52Q96A61 297 aa28.34■■■□□ 2.13
SPHK1-207ENST00000590959 YEATS2Q9ULM3 1422 aa28.33■■■□□ 2.13
SPHK1-207ENST00000590959 ZMYM4Q5VZL5 1548 aa28.33■■■□□ 2.13
SPHK1-207ENST00000590959 ANKRD50Q9ULJ7 1429 aa28.3■■■□□ 2.12
SPHK1-207ENST00000590959 KIF15Q9NS87 1388 aa28.29■■■□□ 2.12
SPHK1-207ENST00000590959 ABCA6Q8N139 1617 aa28.27■■■□□ 2.12
SPHK1-207ENST00000590959 PLXNC1O60486 1568 aa28.27■■■□□ 2.12
SPHK1-207ENST00000590959 MAGI2Q86UL8 1455 aa28.24■■■□□ 2.11
SPHK1-207ENST00000590959 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
SPHK1-207ENST00000590959 MPHOSPH9Q99550 1183 aa28.22■■■□□ 2.11
SPHK1-207ENST00000590959 DUOX2Q9NRD8 1548 aa28.17■■■□□ 2.1
SPHK1-207ENST00000590959 A2MP01023 1474 aa28.17■■■□□ 2.1
SPHK1-207ENST00000590959 DHX29Q7Z478 1369 aaKnown RBP28.17■■■□□ 2.1
SPHK1-207ENST00000590959 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
SPHK1-207ENST00000590959 ARHGEF40Q8TER5 1519 aa28.16■■■□□ 2.1
SPHK1-207ENST00000590959 ATP10AO60312 1499 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms