RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
SDF2-208ENST00000589788 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
SDF2-208ENST00000589788 KDM6BO15054 1643 aa16.69■□□□□ 0.26
SDF2-208ENST00000589788 CD109Q6YHK3 1445 aa16.69■□□□□ 0.26
SDF2-208ENST00000589788 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
SDF2-208ENST00000589788 CAPN15O75808 1086 aa16.66■□□□□ 0.26
SDF2-208ENST00000589788 ABCA9Q8IUA7 1624 aa16.65■□□□□ 0.26
SDF2-208ENST00000589788 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
SDF2-208ENST00000589788 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
SDF2-208ENST00000589788 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
SDF2-208ENST00000589788 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
SDF2-208ENST00000589788 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
SDF2-208ENST00000589788 CASKIN1Q8WXD9 1431 aa16.63■□□□□ 0.25
SDF2-208ENST00000589788 POLA2Q14181 598 aa16.61■□□□□ 0.25
SDF2-208ENST00000589788 FYCO1Q9BQS8 1478 aa16.59■□□□□ 0.25
SDF2-208ENST00000589788 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
SDF2-208ENST00000589788 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
SDF2-208ENST00000589788 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
SDF2-208ENST00000589788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
SDF2-208ENST00000589788 COL17A1Q9UMD9 1497 aaPredicted RBP16.54■□□□□ 0.24
SDF2-208ENST00000589788 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
SDF2-208ENST00000589788 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
SDF2-208ENST00000589788 KIF14Q15058 1648 aa16.53■□□□□ 0.24
SDF2-208ENST00000589788 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
SDF2-208ENST00000589788 NEO1Q92859 1461 aa16.52■□□□□ 0.24
SDF2-208ENST00000589788 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
SDF2-208ENST00000589788 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
SDF2-208ENST00000589788 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
SDF2-208ENST00000589788 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
SDF2-208ENST00000589788 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
SDF2-208ENST00000589788 FANCAO15360 1455 aa16.49■□□□□ 0.23
SDF2-208ENST00000589788 PLCH2O75038 1416 aa16.46■□□□□ 0.23
SDF2-208ENST00000589788 ABCB7O75027 752 aa16.45■□□□□ 0.22
SDF2-208ENST00000589788 AKNAQ7Z591 1439 aa16.44■□□□□ 0.22
SDF2-208ENST00000589788 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
SDF2-208ENST00000589788 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
SDF2-208ENST00000589788 EFCAB2Q5VUJ9 269 aa16.43■□□□□ 0.22
SDF2-208ENST00000589788 PROM2Q8N271 834 aa16.43■□□□□ 0.22
SDF2-208ENST00000589788 ARHGAP5Q13017 1502 aa16.42■□□□□ 0.22
SDF2-208ENST00000589788 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
SDF2-208ENST00000589788 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
SDF2-208ENST00000589788 ADGRL1O94910 1474 aa16.39■□□□□ 0.22
SDF2-208ENST00000589788 PREX2Q70Z35 1606 aa16.38■□□□□ 0.21
SDF2-208ENST00000589788 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
SDF2-208ENST00000589788 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
SDF2-208ENST00000589788 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
SDF2-208ENST00000589788 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
SDF2-208ENST00000589788 SCAPERQ9BY12 1400 aa16.37■□□□□ 0.21
SDF2-208ENST00000589788 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
SDF2-208ENST00000589788 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
SDF2-208ENST00000589788 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
SDF2-208ENST00000589788 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.21
SDF2-208ENST00000589788 DSG3P32926 999 aa16.33■□□□□ 0.2
SDF2-208ENST00000589788 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
SDF2-208ENST00000589788 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
SDF2-208ENST00000589788 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
SDF2-208ENST00000589788 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
SDF2-208ENST00000589788 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
SDF2-208ENST00000589788 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
SDF2-208ENST00000589788 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
SDF2-208ENST00000589788 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
SDF2-208ENST00000589788 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
SDF2-208ENST00000589788 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
SDF2-208ENST00000589788 ABCC1P33527 1531 aa16.28■□□□□ 0.2
SDF2-208ENST00000589788 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
SDF2-208ENST00000589788 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
SDF2-208ENST00000589788 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
SDF2-208ENST00000589788 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
SDF2-208ENST00000589788 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
SDF2-208ENST00000589788 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
SDF2-208ENST00000589788 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
SDF2-208ENST00000589788 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
SDF2-208ENST00000589788 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
SDF2-208ENST00000589788 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
SDF2-208ENST00000589788 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
SDF2-208ENST00000589788 KDM5CP41229 1560 aa16.24■□□□□ 0.19
SDF2-208ENST00000589788 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
SDF2-208ENST00000589788 KANK4Q5T7N3 995 aaPredicted RBP16.23■□□□□ 0.19
SDF2-208ENST00000589788 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
SDF2-208ENST00000589788 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
SDF2-208ENST00000589788 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
SDF2-208ENST00000589788 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
SDF2-208ENST00000589788 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
SDF2-208ENST00000589788 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
SDF2-208ENST00000589788 ATP10AO60312 1499 aa16.19■□□□□ 0.18
SDF2-208ENST00000589788 MLH3Q9UHC1 1453 aa16.19■□□□□ 0.18
SDF2-208ENST00000589788 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
SDF2-208ENST00000589788 BCORL1Q5H9F3 1711 aa16.18■□□□□ 0.18
SDF2-208ENST00000589788 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
SDF2-208ENST00000589788 SPAG9O60271 1321 aaKnown RBP16.16■□□□□ 0.18
SDF2-208ENST00000589788 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
SDF2-208ENST00000589788 DIP2CQ9Y2E4 1556 aa16.16■□□□□ 0.18
SDF2-208ENST00000589788 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
SDF2-208ENST00000589788 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
SDF2-208ENST00000589788 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
SDF2-208ENST00000589788 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
SDF2-208ENST00000589788 MYOM3Q5VTT5 1437 aa16.13■□□□□ 0.17
SDF2-208ENST00000589788 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
SDF2-208ENST00000589788 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
SDF2-208ENST00000589788 MLECQ14165 292 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms