RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-222ENST00000589727 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
ATP6V0A1-222ENST00000589727 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
ATP6V0A1-222ENST00000589727 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
ATP6V0A1-222ENST00000589727 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
ATP6V0A1-222ENST00000589727 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
ATP6V0A1-222ENST00000589727 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
ATP6V0A1-222ENST00000589727 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
ATP6V0A1-222ENST00000589727 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
ATP6V0A1-222ENST00000589727 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
ATP6V0A1-222ENST00000589727 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
ATP6V0A1-222ENST00000589727 MAP3K13O43283 966 aa13□□□□□ -0.33
ATP6V0A1-222ENST00000589727 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
ATP6V0A1-222ENST00000589727 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
ATP6V0A1-222ENST00000589727 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
ATP6V0A1-222ENST00000589727 CUX1P39880 1505 aa12.93□□□□□ -0.34
ATP6V0A1-222ENST00000589727 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
ATP6V0A1-222ENST00000589727 LHX8Q68G74 356 aa12.92□□□□□ -0.34
ATP6V0A1-222ENST00000589727 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
ATP6V0A1-222ENST00000589727 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
ATP6V0A1-222ENST00000589727 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
ATP6V0A1-222ENST00000589727 PPRC1Q5VV67 1664 aaKnown RBP12.91□□□□□ -0.34
ATP6V0A1-222ENST00000589727 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
ATP6V0A1-222ENST00000589727 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
ATP6V0A1-222ENST00000589727 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
ATP6V0A1-222ENST00000589727 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
ATP6V0A1-222ENST00000589727 GLI2P10070 1586 aa12.89□□□□□ -0.35
ATP6V0A1-222ENST00000589727 GSE1Q14687 1217 aa12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 PTPRMP28827 1452 aa12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 TEX14Q8IWB6 1497 aa12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
ATP6V0A1-222ENST00000589727 PLB1Q6P1J6 1458 aa12.87□□□□□ -0.35
ATP6V0A1-222ENST00000589727 PYGBP11216 843 aa12.87□□□□□ -0.35
ATP6V0A1-222ENST00000589727 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
ATP6V0A1-222ENST00000589727 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
ATP6V0A1-222ENST00000589727 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
ATP6V0A1-222ENST00000589727 TIE1P35590 1138 aa12.83□□□□□ -0.36
ATP6V0A1-222ENST00000589727 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
ATP6V0A1-222ENST00000589727 HSPA2P54652 639 aa12.83□□□□□ -0.36
ATP6V0A1-222ENST00000589727 SLC39A7Q92504 469 aa12.8□□□□□ -0.36
ATP6V0A1-222ENST00000589727 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
ATP6V0A1-222ENST00000589727 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
ATP6V0A1-222ENST00000589727 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
ATP6V0A1-222ENST00000589727 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
ATP6V0A1-222ENST00000589727 PTPRGP23470 1445 aa12.78□□□□□ -0.36
ATP6V0A1-222ENST00000589727 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
ATP6V0A1-222ENST00000589727 C7P10643 843 aa12.77□□□□□ -0.37
ATP6V0A1-222ENST00000589727 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
ATP6V0A1-222ENST00000589727 KIF21BO75037 1637 aa12.74□□□□□ -0.37
ATP6V0A1-222ENST00000589727 MAP3K4Q9Y6R4 1608 aa12.74□□□□□ -0.37
ATP6V0A1-222ENST00000589727 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
ATP6V0A1-222ENST00000589727 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
ATP6V0A1-222ENST00000589727 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
ATP6V0A1-222ENST00000589727 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
ATP6V0A1-222ENST00000589727 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
ATP6V0A1-222ENST00000589727 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
ATP6V0A1-222ENST00000589727 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
ATP6V0A1-222ENST00000589727 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
ATP6V0A1-222ENST00000589727 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
ATP6V0A1-222ENST00000589727 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
ATP6V0A1-222ENST00000589727 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
ATP6V0A1-222ENST00000589727 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
ATP6V0A1-222ENST00000589727 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
ATP6V0A1-222ENST00000589727 UHRF1BP1LA0JNW5 1464 aa12.65□□□□□ -0.38
ATP6V0A1-222ENST00000589727 CUL7Q14999 1698 aa12.63□□□□□ -0.39
ATP6V0A1-222ENST00000589727 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
ATP6V0A1-222ENST00000589727 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
ATP6V0A1-222ENST00000589727 SEC24BO95487 1268 aa12.62□□□□□ -0.39
ATP6V0A1-222ENST00000589727 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
ATP6V0A1-222ENST00000589727 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
ATP6V0A1-222ENST00000589727 POTEFA5A3E0 1075 aa12.61□□□□□ -0.39
ATP6V0A1-222ENST00000589727 IER5LQ5T953 404 aa12.61□□□□□ -0.39
ATP6V0A1-222ENST00000589727 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
ATP6V0A1-222ENST00000589727 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
ATP6V0A1-222ENST00000589727 KDM5BQ9UGL1 1544 aa12.59□□□□□ -0.39
ATP6V0A1-222ENST00000589727 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
ATP6V0A1-222ENST00000589727 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
ATP6V0A1-222ENST00000589727 PSEN1P49768 467 aa12.57□□□□□ -0.4
ATP6V0A1-222ENST00000589727 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
ATP6V0A1-222ENST00000589727 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
ATP6V0A1-222ENST00000589727 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
ATP6V0A1-222ENST00000589727 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
ATP6V0A1-222ENST00000589727 ARAP3Q8WWN8 1544 aa12.55□□□□□ -0.4
ATP6V0A1-222ENST00000589727 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
ATP6V0A1-222ENST00000589727 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
ATP6V0A1-222ENST00000589727 RIMS1Q86UR5 1692 aaKnown RBP12.53□□□□□ -0.4
ATP6V0A1-222ENST00000589727 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
ATP6V0A1-222ENST00000589727 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
ATP6V0A1-222ENST00000589727 RAPGEF3O95398 923 aa12.51□□□□□ -0.41
ATP6V0A1-222ENST00000589727 PLCG2P16885 1265 aa12.51□□□□□ -0.41
ATP6V0A1-222ENST00000589727 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
ATP6V0A1-222ENST00000589727 ZCCHC11Q5TAX3 1644 aaKnown RBP12.5□□□□□ -0.41
ATP6V0A1-222ENST00000589727 MED1Q15648 1581 aaPredicted RBP12.49□□□□□ -0.41
ATP6V0A1-222ENST00000589727 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
ATP6V0A1-222ENST00000589727 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
ATP6V0A1-222ENST00000589727 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
ATP6V0A1-222ENST00000589727 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
ATP6V0A1-222ENST00000589727 PTPRTO14522 1441 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms