RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
CCDC130-211ENST00000589669 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
CCDC130-211ENST00000589669 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
CCDC130-211ENST00000589669 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
CCDC130-211ENST00000589669 KDM6BO15054 1643 aa21.56■■□□□ 1.04
CCDC130-211ENST00000589669 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
CCDC130-211ENST00000589669 TEX14Q8IWB6 1497 aa21.56■■□□□ 1.04
CCDC130-211ENST00000589669 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
CCDC130-211ENST00000589669 PPRC1Q5VV67 1664 aaKnown RBP21.53■■□□□ 1.04
CCDC130-211ENST00000589669 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
CCDC130-211ENST00000589669 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
CCDC130-211ENST00000589669 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
CCDC130-211ENST00000589669 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.03
CCDC130-211ENST00000589669 MAGI3Q5TCQ9 1506 aa21.51■■□□□ 1.03
CCDC130-211ENST00000589669 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
CCDC130-211ENST00000589669 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
CCDC130-211ENST00000589669 FMN1Q68DA7 1419 aa21.44■■□□□ 1.02
CCDC130-211ENST00000589669 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
CCDC130-211ENST00000589669 PHLDB1Q86UU1 1377 aa21.41■■□□□ 1.02
CCDC130-211ENST00000589669 KDM4FA0A1W2PPD8 638 aa21.39■■□□□ 1.01
CCDC130-211ENST00000589669 AKT1S1Q96B36 256 aa21.38■■□□□ 1.01
CCDC130-211ENST00000589669 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
CCDC130-211ENST00000589669 ABCA9Q8IUA7 1624 aa21.37■■□□□ 1.01
CCDC130-211ENST00000589669 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
CCDC130-211ENST00000589669 ARAP3Q8WWN8 1544 aa21.34■■□□□ 1.01
CCDC130-211ENST00000589669 NEO1Q92859 1461 aa21.3■■□□□ 1
CCDC130-211ENST00000589669 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
CCDC130-211ENST00000589669 VASPP50552 380 aaPredicted RBP21.28■■□□□ 1
CCDC130-211ENST00000589669 RAPGEF3O95398 923 aa21.27■■□□□ 1
CCDC130-211ENST00000589669 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
CCDC130-211ENST00000589669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCDC130-211ENST00000589669 CLIP1P30622 1438 aa21.24■□□□□ 0.99
CCDC130-211ENST00000589669 CASKIN1Q8WXD9 1431 aa21.24■□□□□ 0.99
CCDC130-211ENST00000589669 STAG3Q9UJ98 1225 aa21.21■□□□□ 0.99
CCDC130-211ENST00000589669 PLCH2O75038 1416 aa21.21■□□□□ 0.99
CCDC130-211ENST00000589669 AKNAQ7Z591 1439 aa21.21■□□□□ 0.99
CCDC130-211ENST00000589669 FANCAO15360 1455 aa21.2■□□□□ 0.98
CCDC130-211ENST00000589669 REM2Q8IYK8 340 aaPredicted RBP21.19■□□□□ 0.98
CCDC130-211ENST00000589669 TROQ12816 1431 aaPredicted RBP21.19■□□□□ 0.98
CCDC130-211ENST00000589669 EFCAB2Q5VUJ9 269 aa21.17■□□□□ 0.98
CCDC130-211ENST00000589669 ADGRL1O94910 1474 aa21.16■□□□□ 0.98
CCDC130-211ENST00000589669 DENND4BO75064 1496 aaPredicted RBP21.15■□□□□ 0.98
CCDC130-211ENST00000589669 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.97
CCDC130-211ENST00000589669 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
CCDC130-211ENST00000589669 SPDYE1Q8NFV5 336 aaPredicted RBP21.12■□□□□ 0.97
CCDC130-211ENST00000589669 FYCO1Q9BQS8 1478 aa21.12■□□□□ 0.97
CCDC130-211ENST00000589669 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
CCDC130-211ENST00000589669 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
CCDC130-211ENST00000589669 PCF11O94913 1555 aaKnown RBP21.08■□□□□ 0.97
CCDC130-211ENST00000589669 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
CCDC130-211ENST00000589669 FRMPD1Q5SYB0 1578 aa21.06■□□□□ 0.96
CCDC130-211ENST00000589669 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
CCDC130-211ENST00000589669 KIF14Q15058 1648 aa21.05■□□□□ 0.96
CCDC130-211ENST00000589669 LRRIQ1Q96JM4 1722 aa21.05■□□□□ 0.96
CCDC130-211ENST00000589669 MAGI2Q86UL8 1455 aa21.03■□□□□ 0.96
CCDC130-211ENST00000589669 IFNLR1Q8IU57 520 aaPredicted RBP21.02■□□□□ 0.96
CCDC130-211ENST00000589669 CLEC11AQ9Y240 323 aa21.02■□□□□ 0.96
CCDC130-211ENST00000589669 AMER1Q5JTC6 1135 aaPredicted RBP21.01■□□□□ 0.95
CCDC130-211ENST00000589669 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
CCDC130-211ENST00000589669 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
CCDC130-211ENST00000589669 AFAP1Q8N556 730 aa21■□□□□ 0.95
CCDC130-211ENST00000589669 RTN4Q9NQC3 1192 aaKnown RBP21■□□□□ 0.95
CCDC130-211ENST00000589669 RICTORQ6R327 1708 aa21■□□□□ 0.95
CCDC130-211ENST00000589669 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
CCDC130-211ENST00000589669 ZMYM4Q5VZL5 1548 aa20.99■□□□□ 0.95
CCDC130-211ENST00000589669 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
CCDC130-211ENST00000589669 PITPNM1O00562 1244 aa20.96■□□□□ 0.95
CCDC130-211ENST00000589669 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.95
CCDC130-211ENST00000589669 PLCD3Q8N3E9 789 aa20.94■□□□□ 0.94
CCDC130-211ENST00000589669 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
CCDC130-211ENST00000589669 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
CCDC130-211ENST00000589669 MIER1Q8N108 512 aa20.93■□□□□ 0.94
CCDC130-211ENST00000589669 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
CCDC130-211ENST00000589669 ZFYVE16Q7Z3T8 1539 aa20.92■□□□□ 0.94
CCDC130-211ENST00000589669 GPATCH8Q9UKJ3 1502 aaKnown RBP20.92■□□□□ 0.94
CCDC130-211ENST00000589669 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
CCDC130-211ENST00000589669 ATP10AO60312 1499 aa20.9■□□□□ 0.94
CCDC130-211ENST00000589669 CDC42BPBQ9Y5S2 1711 aa20.9■□□□□ 0.94
CCDC130-211ENST00000589669 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
CCDC130-211ENST00000589669 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
CCDC130-211ENST00000589669 ADAMTSL3P82987 1691 aa20.88■□□□□ 0.93
CCDC130-211ENST00000589669 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
CCDC130-211ENST00000589669 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
CCDC130-211ENST00000589669 PREX2Q70Z35 1606 aa20.87■□□□□ 0.93
CCDC130-211ENST00000589669 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
CCDC130-211ENST00000589669 PTPRMP28827 1452 aa20.87■□□□□ 0.93
CCDC130-211ENST00000589669 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
CCDC130-211ENST00000589669 MLH3Q9UHC1 1453 aa20.86■□□□□ 0.93
CCDC130-211ENST00000589669 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
CCDC130-211ENST00000589669 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
CCDC130-211ENST00000589669 KDM5CP41229 1560 aa20.85■□□□□ 0.93
CCDC130-211ENST00000589669 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
CCDC130-211ENST00000589669 KIAA1107Q9UPP5 1409 aa20.84■□□□□ 0.93
CCDC130-211ENST00000589669 VPS8Q8N3P4 1428 aa20.83■□□□□ 0.93
CCDC130-211ENST00000589669 ABCC1P33527 1531 aa20.83■□□□□ 0.92
CCDC130-211ENST00000589669 MLECQ14165 292 aa20.82■□□□□ 0.92
CCDC130-211ENST00000589669 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
CCDC130-211ENST00000589669 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
CCDC130-211ENST00000589669 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
CCDC130-211ENST00000589669 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms