RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
H3F3B-207ENST00000589417 EHBP1L1Q8N3D4 1523 aa27.83■■■□□ 2.05
H3F3B-207ENST00000589417 KDM4FA0A1W2PPD8 638 aa27.83■■■□□ 2.05
H3F3B-207ENST00000589417 POGZQ7Z3K3 1410 aa27.83■■■□□ 2.05
H3F3B-207ENST00000589417 PREX2Q70Z35 1606 aa27.81■■■□□ 2.04
H3F3B-207ENST00000589417 RICTORQ6R327 1708 aa27.81■■■□□ 2.04
H3F3B-207ENST00000589417 MAGI2Q86UL8 1455 aa27.81■■■□□ 2.04
H3F3B-207ENST00000589417 ZMYM4Q5VZL5 1548 aa27.81■■■□□ 2.04
H3F3B-207ENST00000589417 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
H3F3B-207ENST00000589417 CDC42BPBQ9Y5S2 1711 aa27.8■■■□□ 2.04
H3F3B-207ENST00000589417 CCNB3Q8WWL7 1395 aa27.78■■■□□ 2.04
H3F3B-207ENST00000589417 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
H3F3B-207ENST00000589417 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
H3F3B-207ENST00000589417 ZNF518AQ6AHZ1 1483 aa27.74■■■□□ 2.03
H3F3B-207ENST00000589417 LRRC9Q6ZRR7 1453 aa27.74■■■□□ 2.03
H3F3B-207ENST00000589417 CFDP1Q9UEE9 299 aaPredicted RBP27.73■■■□□ 2.03
H3F3B-207ENST00000589417 AFAP1Q8N556 730 aa27.71■■■□□ 2.03
H3F3B-207ENST00000589417 KIAA1107Q9UPP5 1409 aa27.71■■■□□ 2.03
H3F3B-207ENST00000589417 ABCC1P33527 1531 aa27.71■■■□□ 2.03
H3F3B-207ENST00000589417 ARHGEF12Q9NZN5 1544 aa27.71■■■□□ 2.03
H3F3B-207ENST00000589417 NCOA2Q15596 1464 aa27.7■■■□□ 2.02
H3F3B-207ENST00000589417 ARHGEF40Q8TER5 1519 aa27.69■■■□□ 2.02
H3F3B-207ENST00000589417 KDM5CP41229 1560 aa27.69■■■□□ 2.02
H3F3B-207ENST00000589417 KANK4Q5T7N3 995 aaPredicted RBP27.68■■■□□ 2.02
H3F3B-207ENST00000589417 PLEKHH2Q8IVE3 1493 aa27.67■■■□□ 2.02
H3F3B-207ENST00000589417 ZFYVE16Q7Z3T8 1539 aa27.67■■■□□ 2.02
H3F3B-207ENST00000589417 YEATS2Q9ULM3 1422 aa27.67■■■□□ 2.02
H3F3B-207ENST00000589417 TRAPPC8Q9Y2L5 1435 aa27.67■■■□□ 2.02
H3F3B-207ENST00000589417 MLH3Q9UHC1 1453 aa27.65■■■□□ 2.02
H3F3B-207ENST00000589417 ZNF777Q9ULD5 760 aaPredicted RBP27.65■■■□□ 2.02
H3F3B-207ENST00000589417 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
H3F3B-207ENST00000589417 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.02
H3F3B-207ENST00000589417 APLP2Q06481 763 aa27.63■■■□□ 2.01
H3F3B-207ENST00000589417 ATP10AO60312 1499 aa27.61■■■□□ 2.01
H3F3B-207ENST00000589417 HNRNPMP52272 730 aaKnown RBP eCLIP27.59■■■□□ 2.01
H3F3B-207ENST00000589417 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
H3F3B-207ENST00000589417 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
H3F3B-207ENST00000589417 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
H3F3B-207ENST00000589417 MBD5Q9P267 1494 aa27.56■■■□□ 2
H3F3B-207ENST00000589417 C9orf84Q5VXU9 1444 aa27.55■■■□□ 2
H3F3B-207ENST00000589417 HECW2Q9P2P5 1572 aa27.55■■■□□ 2
H3F3B-207ENST00000589417 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
H3F3B-207ENST00000589417 RSPH4AQ5TD94 716 aa27.53■■■□□ 2
H3F3B-207ENST00000589417 SPAG9O60271 1321 aaKnown RBP27.5■■□□□ 1.99
H3F3B-207ENST00000589417 REREQ9P2R6 1566 aa27.5■■□□□ 1.99
H3F3B-207ENST00000589417 MIA2Q96PC5 1412 aa27.5■■□□□ 1.99
H3F3B-207ENST00000589417 ADAMTSL3P82987 1691 aa27.49■■□□□ 1.99
H3F3B-207ENST00000589417 MYOM3Q5VTT5 1437 aa27.48■■□□□ 1.99
H3F3B-207ENST00000589417 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
H3F3B-207ENST00000589417 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
H3F3B-207ENST00000589417 MYT1LQ9UL68 1186 aa27.47■■□□□ 1.99
H3F3B-207ENST00000589417 KIDINS220Q9ULH0 1771 aa27.45■■□□□ 1.99
H3F3B-207ENST00000589417 CAMSAP2Q08AD1 1489 aa27.45■■□□□ 1.99
H3F3B-207ENST00000589417 RTEL1-TNFRSF6BF6WH68 1400 aa27.44■■□□□ 1.98
H3F3B-207ENST00000589417 SIGLEC1Q9BZZ2 1709 aa27.44■■□□□ 1.98
H3F3B-207ENST00000589417 ABCA6Q8N139 1617 aa27.43■■□□□ 1.98
H3F3B-207ENST00000589417 AGLP35573 1532 aa27.42■■□□□ 1.98
H3F3B-207ENST00000589417 ATP7AQ04656 1500 aa27.4■■□□□ 1.98
H3F3B-207ENST00000589417 INO80Q9ULG1 1556 aaPredicted RBP27.39■■□□□ 1.98
H3F3B-207ENST00000589417 CCDC141Q6ZP82 1450 aa27.39■■□□□ 1.98
H3F3B-207ENST00000589417 ARHGEF5Q12774 1597 aa27.38■■□□□ 1.97
H3F3B-207ENST00000589417 PTPRMP28827 1452 aa27.38■■□□□ 1.97
H3F3B-207ENST00000589417 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
H3F3B-207ENST00000589417 TSPY4P0CV99 314 aa27.33■■□□□ 1.97
H3F3B-207ENST00000589417 TSPY10P0CW01 314 aa27.33■■□□□ 1.97
H3F3B-207ENST00000589417 MLECQ14165 292 aa27.32■■□□□ 1.96
H3F3B-207ENST00000589417 A2MP01023 1474 aa27.32■■□□□ 1.96
H3F3B-207ENST00000589417 FGD6Q6ZV73 1430 aa27.31■■□□□ 1.96
H3F3B-207ENST00000589417 TCOF1Q13428 1488 aaKnown RBP27.29■■□□□ 1.96
H3F3B-207ENST00000589417 PLXNC1O60486 1568 aa27.29■■□□□ 1.96
H3F3B-207ENST00000589417 DHX29Q7Z478 1369 aaKnown RBP27.27■■□□□ 1.96
H3F3B-207ENST00000589417 MAST1Q9Y2H9 1570 aa27.23■■□□□ 1.95
H3F3B-207ENST00000589417 PTPN23Q9H3S7 1636 aa27.23■■□□□ 1.95
H3F3B-207ENST00000589417 ADGBQ8N7X0 1667 aa27.22■■□□□ 1.95
H3F3B-207ENST00000589417 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
H3F3B-207ENST00000589417 ABCC5O15440 1437 aa27.21■■□□□ 1.95
H3F3B-207ENST00000589417 RIMS1Q86UR5 1692 aaKnown RBP27.21■■□□□ 1.95
H3F3B-207ENST00000589417 CNTLNQ9NXG0 1405 aa27.18■■□□□ 1.94
H3F3B-207ENST00000589417 SHANK2Q9UPX8 1470 aa27.18■■□□□ 1.94
H3F3B-207ENST00000589417 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
H3F3B-207ENST00000589417 DAPK1P53355 1430 aa27.15■■□□□ 1.94
H3F3B-207ENST00000589417 ESF1Q9H501 851 aaKnown RBP27.13■■□□□ 1.93
H3F3B-207ENST00000589417 DNMT1P26358 1616 aaKnown RBP27.11■■□□□ 1.93
H3F3B-207ENST00000589417 GGT6Q6P531 493 aa27.1■■□□□ 1.93
H3F3B-207ENST00000589417 KIF3BO15066 747 aa27.09■■□□□ 1.93
H3F3B-207ENST00000589417 CEBPAP49715 358 aaPredicted RBP27.09■■□□□ 1.93
H3F3B-207ENST00000589417 ZMYM3Q14202 1370 aa27.06■■□□□ 1.92
H3F3B-207ENST00000589417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.06■■□□□ 1.927e-39■□□□□ 9.5
H3F3B-207ENST00000589417 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
H3F3B-207ENST00000589417 DUOX2Q9NRD8 1548 aa27.04■■□□□ 1.92
H3F3B-207ENST00000589417 FAM135AQ9P2D6 1515 aa27.04■■□□□ 1.92
H3F3B-207ENST00000589417 CROCC2H7BZ55 1655 aa27.04■■□□□ 1.92
H3F3B-207ENST00000589417 LMTK3Q96Q04 1460 aa27.03■■□□□ 1.92
H3F3B-207ENST00000589417 KIF15Q9NS87 1388 aa27.03■■□□□ 1.92
H3F3B-207ENST00000589417 NCOA1Q15788 1441 aa27.02■■□□□ 1.92
H3F3B-207ENST00000589417 ANKRD30AQ9BXX3 1397 aa27.02■■□□□ 1.92
H3F3B-207ENST00000589417 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
H3F3B-207ENST00000589417 MROH2AA6NES4 1674 aa27.01■■□□□ 1.92
H3F3B-207ENST00000589417 ADGRL2O95490 1459 aa27.01■■□□□ 1.91
H3F3B-207ENST00000589417 PLPPR3Q6T4P5 718 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms