RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	ATP10B	O94823	1461 aa		13.29	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	HECW1	Q76N89	1606 aa		13.29	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	CDK13	Q14004	1512 aa	Known RBP	13.29	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	DDX10	Q13206	875 aa	Known RBP	13.28	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	EPRS	P07814	1512 aa	Known RBP	13.28	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	MTUS2	Q5JR59	1369 aa		13.28	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	IRX6	P78412	446 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA2D4-223	ENST00000588077	RTN4	Q9NQC3	1192 aa	Known RBP	13.26	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	KDM5B	Q9UGL1	1544 aa		13.26	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	ASXL2	Q76L83	1435 aa		13.25	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	CCDC18	Q5T9S5	1454 aa		13.25	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	FAM69C	Q0P6D2	419 aa		13.24	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	KANK4	Q5T7N3	995 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.22	□□□□□ -0.29
CACNA2D4-223	ENST00000588077	WDR7	Q9Y4E6	1490 aa		13.19	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	FANCI	Q9NVI1	1328 aa		13.19	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	NBR1	Q14596	966 aa		13.18	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	TRO	Q12816	1431 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	IL27	Q8NEV9	243 aa		13.18	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	TIAM1	Q13009	1591 aa		13.17	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.15	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	MAPKBP1	O60336	1514 aa		13.15	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	LRRC9	Q6ZRR7	1453 aa		13.15	□□□□□ -0.3
CACNA2D4-223	ENST00000588077	MAP3K1	Q13233	1512 aa		13.14	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	CCNB3	Q8WWL7	1395 aa		13.13	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	RRBP1	Q9P2E9	1410 aa	Known RBP	13.13	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	LRRIQ1	Q96JM4	1722 aa		13.13	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	MAGI3	Q5TCQ9	1506 aa		13.12	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	ABCC10	Q5T3U5	1492 aa		13.11	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	EHBP1L1	Q8N3D4	1523 aa		13.11	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	CD109	Q6YHK3	1445 aa		13.11	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	CFAP43	Q8NDM7	1665 aa		13.09	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	KIF14	Q15058	1648 aa		13.09	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	NCOA2	Q15596	1464 aa		13.09	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	EFCAB2	Q5VUJ9	269 aa		13.08	□□□□□ -0.31
CACNA2D4-223	ENST00000588077	SIN3A	Q96ST3	1273 aa		13.08	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	PPP1R15A	O75807	674 aa	Predicted RBP	13.07	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	FAM50A	Q14320	339 aa	Known RBP	13.07	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	PAK3	O75914	559 aa	Predicted RBP	13.07	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	ANP32C	O43423	234 aa		13.06	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	DIP2B	Q9P265	1576 aa		13.05	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.04	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	PHLDB1	Q86UU1	1377 aa		13.04	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	ARHGAP5	Q13017	1502 aa		13.03	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	TTC37	Q6PGP7	1564 aa		13.02	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	ZNF644	Q9H582	1327 aa	Predicted RBP	13.02	□□□□□ -0.32
CACNA2D4-223	ENST00000588077	B4GALNT3	Q6L9W6	998 aa		13.02	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	PLCH2	O75038	1416 aa		13.02	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	RTL5	Q5HYW3	569 aa	Predicted RBP	13.01	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.01	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	TSPOAP1	O95153	1857 aa		13.01	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	MYOM3	Q5VTT5	1437 aa		13.01	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	NOP58	Q9Y2X3	529 aa	Known RBP	13	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	GLI2	P10070	1586 aa		13	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	FANCA	O15360	1455 aa		13	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	HNRNPM	P52272	730 aa	Known RBP eCLIP	13	□□□□□ -0.33	2e-7	■■■■□ 25
CACNA2D4-223	ENST00000588077	CCER2	I3L3R5	266 aa		13	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	ABCA9	Q8IUA7	1624 aa		12.99	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	TEX14	Q8IWB6	1497 aa		12.99	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	GLIPR1L2	Q4G1C9	344 aa		12.98	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	RAB3GAP2	Q9H2M9	1393 aa		12.98	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	RAPGEF3	O95398	923 aa		12.97	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	FGD6	Q6ZV73	1430 aa		12.97	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	AKNA	Q7Z591	1439 aa		12.97	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	KIF13A	Q9H1H9	1805 aa		12.96	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	SCAPER	Q9BY12	1400 aa		12.96	□□□□□ -0.33
CACNA2D4-223	ENST00000588077	MYO5C	Q9NQX4	1742 aa		12.95	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	TSPY4	P0CV99	314 aa		12.95	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	TSPY10	P0CW01	314 aa		12.95	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	TIMELESS	Q9UNS1	1208 aa		12.95	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	AFAP1	Q8N556	730 aa		12.95	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	ADGRL1	O94910	1474 aa		12.94	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	MAP3K4	Q9Y6R4	1608 aa		12.94	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	MIA2	Q96PC5	1412 aa		12.94	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	CHIC2	Q9UKJ5	165 aa		12.94	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	ZMYND15	Q9H091	742 aa		12.93	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	VSIG10	Q8N0Z9	540 aa		12.93	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	PPP4R2	Q9NY27	417 aa		12.93	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	ITSN2	Q9NZM3	1697 aa		12.92	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	NEO1	Q92859	1461 aa		12.92	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	PREX2	Q70Z35	1606 aa		12.92	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	CDC42BPA	Q5VT25	1732 aa		12.92	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	CAMSAP2	Q08AD1	1489 aa		12.91	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	DENND4B	O75064	1496 aa	Predicted RBP	12.9	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	PLEKHH2	Q8IVE3	1493 aa		12.9	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	SPAG9	O60271	1321 aa	Known RBP	12.9	□□□□□ -0.34
CACNA2D4-223	ENST00000588077	RSPH4A	Q5TD94	716 aa		12.9	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	ARAP3	Q8WWN8	1544 aa		12.89	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	CDC42BPB	Q9Y5S2	1711 aa		12.89	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.89	□□□□□ -0.35	7e-7	■□□□□ 10.9
CACNA2D4-223	ENST00000588077	PTPN23	Q9H3S7	1636 aa		12.88	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	SYCP2	Q9BX26	1530 aa		12.88	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	TRAPPC8	Q9Y2L5	1435 aa		12.88	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	CFAP74	Q9C0B2	1584 aa		12.87	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	SAMD9L	Q8IVG5	1584 aa		12.87	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	KIAA1107	Q9UPP5	1409 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms